RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 MAP4K1Q92918 833 aa8.56□□□□□ -1.04
CCDC47-205ENST00000582331 PRKD2Q9BZL6 878 aa8.56□□□□□ -1.04
CCDC47-205ENST00000582331 RSAD1Q9HA92 442 aa8.56□□□□□ -1.04
CCDC47-205ENST00000582331 DISC1Q9NRI5 854 aa8.56□□□□□ -1.04
CCDC47-205ENST00000582331 BARHL2Q9NY43 387 aa8.56□□□□□ -1.04
CCDC47-205ENST00000582331 SUCLA2Q9P2R7 463 aaPredicted RBP8.56□□□□□ -1.04
CCDC47-205ENST00000582331 GMEB2Q9UKD1 530 aa8.56□□□□□ -1.04
CCDC47-205ENST00000582331 MTF2Q9Y483 593 aaPredicted RBP8.56□□□□□ -1.04
CCDC47-205ENST00000582331 RBM8AQ9Y5S9 174 aaKnown RBP8.56□□□□□ -1.04
CCDC47-205ENST00000582331 V9GY48 417 aaPredicted RBP8.56□□□□□ -1.04
CCDC47-205ENST00000582331 CNTNAP2Q9UHC6 1331 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 ACACBO00763 2458 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 hCG_1984214I3L0E3 225 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 NCAM2O15394 837 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 IGHDP01880 384 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 CHMLP26374 656 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 OR1G1P47890 313 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 AFF1P51825 1210 aaKnown RBP8.55□□□□□ -1.04
CCDC47-205ENST00000582331 PFKPQ01813 784 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 DSG1Q02413 1049 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 AAMPQ13685 434 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 MTERF2Q49AM1 385 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 PRR16Q569H4 304 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 PPM1JQ5JR12 505 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 ZBTB41Q5SVQ8 909 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 TSSK4Q6SA08 328 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 PARM1Q6UWI2 310 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 RHPN2Q8IUC4 686 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 ZNF713Q8N859 430 aaPredicted RBP8.55□□□□□ -1.04
CCDC47-205ENST00000582331 KCNV2Q8TDN2 545 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 NELL1Q92832 810 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 FGF14Q92915 247 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 NELL2Q99435 816 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 NIFKQ9BYG3 293 aaKnown RBP8.55□□□□□ -1.04
CCDC47-205ENST00000582331 PARD6AQ9NPB6 346 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 LTB4R2Q9NPC1 389 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 AGPAT5Q9NUQ2 364 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 RBM28Q9NW13 759 aaKnown RBP8.55□□□□□ -1.04
CCDC47-205ENST00000582331 MARCH5Q9NX47 278 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 CDH7Q9ULB5 785 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 RAB23Q9ULC3 237 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 PRG3Q9Y2Y8 225 aaPredicted RBP8.55□□□□□ -1.04
CCDC47-205ENST00000582331 CACNA1IQ9P0X4 2223 aa8.55□□□□□ -1.04
CCDC47-205ENST00000582331 TPRP12270 2363 aaKnown RBP8.55□□□□□ -1.04
CCDC47-205ENST00000582331 CNTNAP5Q8WYK1 1306 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 IGKV6-21A0A0C4DH24 114 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 SLC30A4O14863 429 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 SGSM2O43147 1006 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 TGM5O43548 720 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 NR1I2O75469 434 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 ZMYND10O75800 440 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 EFEMP2O95967 443 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 GSPT1P15170 499 aaKnown RBP8.54□□□□□ -1.04
CCDC47-205ENST00000582331 CD72P21854 359 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 SFNP31947 248 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 SPEM2Q0P670 501 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 FUT2Q10981 343 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 UGCGQ16739 394 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 XKR3Q5GH77 459 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 TTC22Q5TAA0 569 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 LILRA6Q6PI73 481 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 MTSS1LQ765P7 747 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 GRASPQ7Z6J2 395 aaPredicted RBP8.54□□□□□ -1.04
CCDC47-205ENST00000582331 SGMS1Q86VZ5 419 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 KSR1Q8IVT5 923 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 COLGALT2Q8IYK4 626 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 RNF168Q8IYW5 571 aaPredicted RBP8.54□□□□□ -1.04
CCDC47-205ENST00000582331 CNNM3Q8NE01 707 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 NETO1Q8TDF5 533 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 CLDN23Q96B33 292 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 NLRP4Q96MN2 994 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 COLEC11Q9BWP8 271 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 FAM126AQ9BYI3 521 aaPredicted RBP8.54□□□□□ -1.04
CCDC47-205ENST00000582331 LRRC2Q9BYS8 371 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 UBN1Q9NPG3 1134 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.54□□□□□ -1.04
CCDC47-205ENST00000582331 CHST7Q9NS84 486 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 FNIP2Q9P278 1114 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 TSR3Q9UJK0 312 aaKnown RBP8.54□□□□□ -1.04
CCDC47-205ENST00000582331 MIA3Q5JRA6 1907 aa8.54□□□□□ -1.04
CCDC47-205ENST00000582331 DOCK8Q8NF50 2099 aa8.53□□□□□ -1.04
CCDC47-205ENST00000582331 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.53□□□□□ -1.04
CCDC47-205ENST00000582331 CHMP2AO43633 222 aa8.53□□□□□ -1.04
CCDC47-205ENST00000582331 GAS7O60861 476 aa8.53□□□□□ -1.04
CCDC47-205ENST00000582331 MAFO75444 373 aaPredicted RBP8.53□□□□□ -1.04
CCDC47-205ENST00000582331 ITGA4P13612 1032 aa8.53□□□□□ -1.04
CCDC47-205ENST00000582331 NCLP19338 710 aaKnown RBP8.53□□□□□ -1.04
CCDC47-205ENST00000582331 TARSP26639 723 aaKnown RBP8.53□□□□□ -1.04
CCDC47-205ENST00000582331 CIITAP33076 1130 aa8.53□□□□□ -1.04
CCDC47-205ENST00000582331 RPS9P46781 194 aaKnown RBP8.53□□□□□ -1.04
CCDC47-205ENST00000582331 JAK3P52333 1124 aa8.53□□□□□ -1.04
CCDC47-205ENST00000582331 NRLP54845 237 aa8.53□□□□□ -1.04
CCDC47-205ENST00000582331 COL9A3Q14050 684 aaPredicted RBP8.53□□□□□ -1.04
CCDC47-205ENST00000582331 RTN1Q16799 776 aa8.53□□□□□ -1.04
CCDC47-205ENST00000582331 GLYCTKQ8IVS8 523 aa8.53□□□□□ -1.04
CCDC47-205ENST00000582331 GPR65Q8IYL9 337 aa8.53□□□□□ -1.04
CCDC47-205ENST00000582331 CELF5Q8N6W0 485 aaKnown RBP8.53□□□□□ -1.04
CCDC47-205ENST00000582331 FGF13Q92913 245 aa8.53□□□□□ -1.04
CCDC47-205ENST00000582331 CEP89Q96ST8 783 aa8.53□□□□□ -1.04
CCDC47-205ENST00000582331 RIT2Q99578 217 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms