RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 ADAM9Q13443 819 aa12.57□□□□□ -0.4
GGA3-211ENST00000582232 NOLC1Q14978 699 aaKnown RBP eCLIP12.57□□□□□ -0.4
GGA3-211ENST00000582232 IQCB1Q15051 598 aa12.57□□□□□ -0.4
GGA3-211ENST00000582232 KYAT1Q16773 422 aa12.57□□□□□ -0.4
GGA3-211ENST00000582232 TMEM132AQ24JP5 1023 aa12.57□□□□□ -0.4
GGA3-211ENST00000582232 ZNF568Q3ZCX4 644 aa12.57□□□□□ -0.4
GGA3-211ENST00000582232 SPATA1Q5VX52 437 aa12.57□□□□□ -0.4
GGA3-211ENST00000582232 CNKSR3Q6P9H4 555 aa12.57□□□□□ -0.4
GGA3-211ENST00000582232 LRRC55Q6ZSA7 311 aa12.57□□□□□ -0.4
GGA3-211ENST00000582232 XXYLT1Q8NBI6 393 aa12.57□□□□□ -0.4
GGA3-211ENST00000582232 DBF4BQ8NFT6 615 aa12.57□□□□□ -0.4
GGA3-211ENST00000582232 FAM200AQ8TCP9 573 aa12.57□□□□□ -0.4
GGA3-211ENST00000582232 POMGNT1Q8WZA1 660 aa12.57□□□□□ -0.4
GGA3-211ENST00000582232 CEP63Q96MT8 703 aa12.57□□□□□ -0.4
GGA3-211ENST00000582232 CBWD1Q9BRT8 395 aa12.57□□□□□ -0.4
GGA3-211ENST00000582232 TCHPQ9BT92 498 aa12.57□□□□□ -0.4
GGA3-211ENST00000582232 TSPYL2Q9H2G4 693 aaPredicted RBP12.57□□□□□ -0.4
GGA3-211ENST00000582232 KIAA1586Q9HCI6 787 aa12.57□□□□□ -0.4
GGA3-211ENST00000582232 IL23AQ9NPF7 189 aa12.57□□□□□ -0.4
GGA3-211ENST00000582232 RGS18Q9NS28 235 aa12.57□□□□□ -0.4
GGA3-211ENST00000582232 HSPBP1Q9NZL4 362 aa12.57□□□□□ -0.4
GGA3-211ENST00000582232 AGO2Q9UKV8 859 aaKnown RBP12.57□□□□□ -0.4
GGA3-211ENST00000582232 PDE4DIPQ5VU43 2346 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 CITO14578 2027 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 TTC3P53804 2025 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 A0A0U1RQF3 1178 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 SMTNL1A8MU46 457 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 CETN3O15182 167 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 EXTL3O43909 919 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 MGEA5O60502 916 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 FGFR1OPO95684 399 aaKnown RBP12.56□□□□□ -0.4
GGA3-211ENST00000582232 SKIP12755 728 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 CSF2RAP15509 400 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 NR2F2P24468 414 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 RAB27AP51159 221 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 FAM189BP81408 668 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 PPIGQ13427 754 aaKnown RBP eCLIP12.56□□□□□ -0.46e-8■■■□□ 15.8
GGA3-211ENST00000582232 NCAPHQ15003 741 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 TWF2Q6IBS0 349 aaKnown RBP12.56□□□□□ -0.4
GGA3-211ENST00000582232 FILIP1Q7Z7B0 1213 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 MRPL10Q7Z7H8 261 aaKnown RBP12.56□□□□□ -0.4
GGA3-211ENST00000582232 RTN4RL1Q86UN2 441 aaPredicted RBP12.56□□□□□ -0.4
GGA3-211ENST00000582232 DHX40Q8IX18 779 aaKnown RBP12.56□□□□□ -0.4
GGA3-211ENST00000582232 GPD1LQ8N335 351 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 CSGALNACT2Q8N6G5 542 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 NOC3LQ8WTT2 800 aaKnown RBP12.56□□□□□ -0.4
GGA3-211ENST00000582232 DPF3Q92784 378 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 ADAM2Q99965 735 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 MKNK1Q9BUB5 465 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 MSTO1Q9BUK6 570 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 C1orf112Q9NSG2 853 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 ANKFY1Q9P2R3 1169 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 NR2E3Q9Y5X4 410 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 CEP290O15078 2479 aa12.56□□□□□ -0.4
GGA3-211ENST00000582232 C9IYK1 514 aa12.55□□□□□ -0.4
GGA3-211ENST00000582232 ENPP3O14638 875 aa12.55□□□□□ -0.4
GGA3-211ENST00000582232 SLC16A3O15427 465 aaKnown RBP12.55□□□□□ -0.4
GGA3-211ENST00000582232 EFCAB14O75071 495 aa12.55□□□□□ -0.4
GGA3-211ENST00000582232 ADRB2P07550 413 aa12.55□□□□□ -0.4
GGA3-211ENST00000582232 GRM5P41594 1212 aa12.55□□□□□ -0.4
GGA3-211ENST00000582232 MARSP56192 900 aaKnown RBP12.55□□□□□ -0.4
GGA3-211ENST00000582232 FPGSQ05932 587 aa12.55□□□□□ -0.4
GGA3-211ENST00000582232 ENPEPQ07075 957 aa12.55□□□□□ -0.4
GGA3-211ENST00000582232 TCTN1Q2MV58 587 aa12.55□□□□□ -0.4
GGA3-211ENST00000582232 CRELD2Q6UXH1 353 aaPredicted RBP12.55□□□□□ -0.4
GGA3-211ENST00000582232 SLC24A5Q71RS6 500 aa12.55□□□□□ -0.4
GGA3-211ENST00000582232 DEFB128Q7Z7B8 93 aa12.55□□□□□ -0.4
GGA3-211ENST00000582232 CDR2LQ86X02 465 aaPredicted RBP12.55□□□□□ -0.4
GGA3-211ENST00000582232 LINC01599Q8WXQ3 324 aa12.55□□□□□ -0.4
GGA3-211ENST00000582232 BADQ92934 168 aa12.55□□□□□ -0.4
GGA3-211ENST00000582232 SRRTQ9BXP5 876 aaKnown RBP12.55□□□□□ -0.4
GGA3-211ENST00000582232 EIF2AQ9BY44 585 aaKnown RBP12.55□□□□□ -0.4
GGA3-211ENST00000582232 PCIF1Q9H4Z3 704 aa12.55□□□□□ -0.4
GGA3-211ENST00000582232 THAP9Q9H5L6 903 aa12.55□□□□□ -0.4
GGA3-211ENST00000582232 CBX8Q9HC52 389 aa12.55□□□□□ -0.4
GGA3-211ENST00000582232 FAM105AQ9NUU6 356 aa12.55□□□□□ -0.4
GGA3-211ENST00000582232 CPSF3Q9UKF6 684 aaKnown RBP12.55□□□□□ -0.4
GGA3-211ENST00000582232 PCDHB2Q9Y5E7 798 aa12.55□□□□□ -0.4
GGA3-211ENST00000582232 ABHD14A-ACY1A0A1B0GW23 586 aa12.54□□□□□ -0.4
GGA3-211ENST00000582232 EXOC3O60645 756 aa12.54□□□□□ -0.4
GGA3-211ENST00000582232 AKAP3O75969 853 aa12.54□□□□□ -0.4
GGA3-211ENST00000582232 BAIAP3O94812 1187 aa12.54□□□□□ -0.4
GGA3-211ENST00000582232 NPTXRO95502 500 aa12.54□□□□□ -0.4
GGA3-211ENST00000582232 GNA14O95837 355 aa12.54□□□□□ -0.4
GGA3-211ENST00000582232 EOMESO95936 686 aa12.54□□□□□ -0.4
GGA3-211ENST00000582232 CLTAP09496 248 aa12.54□□□□□ -0.4
GGA3-211ENST00000582232 PSMC2P35998 433 aaKnown RBP12.54□□□□□ -0.4
GGA3-211ENST00000582232 MATR3P43243 847 aaKnown RBP eCLIP12.54□□□□□ -0.4
GGA3-211ENST00000582232 CYP2J2P51589 502 aa12.54□□□□□ -0.4
GGA3-211ENST00000582232 IKBKEQ14164 716 aa12.54□□□□□ -0.4
GGA3-211ENST00000582232 TPD52L1Q16890 204 aaPredicted RBP12.54□□□□□ -0.4
GGA3-211ENST00000582232 CDKAL1Q5VV42 579 aa12.54□□□□□ -0.4
GGA3-211ENST00000582232 C16orf59Q7L2K0 433 aa12.54□□□□□ -0.4
GGA3-211ENST00000582232 ZBTB33Q86T24 672 aa12.54□□□□□ -0.4
GGA3-211ENST00000582232 IRF2BP1Q8IU81 584 aa12.54□□□□□ -0.4
GGA3-211ENST00000582232 AOPEPQ8N6M6 819 aa12.54□□□□□ -0.4
GGA3-211ENST00000582232 SMG8Q8ND04 991 aaKnown RBP12.54□□□□□ -0.4
GGA3-211ENST00000582232 BORCS6Q96GS4 357 aa12.54□□□□□ -0.4
GGA3-211ENST00000582232 MFSD14AQ96MC6 490 aa12.54□□□□□ -0.4
GGA3-211ENST00000582232 TRIM6Q9C030 488 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms