RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 PPP4R4Q6NUP7 873 aa4.81□□□□□ -1.64
SMG8-205ENST00000580798 RD3Q7Z3Z2 195 aa4.81□□□□□ -1.64
SMG8-205ENST00000580798 JAZF1Q86VZ6 243 aa4.81□□□□□ -1.64
SMG8-205ENST00000580798 EGFL6Q8IUX8 553 aa4.81□□□□□ -1.64
SMG8-205ENST00000580798 ATL2Q8NHH9 583 aa4.81□□□□□ -1.64
SMG8-205ENST00000580798 NKD2Q969F2 451 aaPredicted RBP4.81□□□□□ -1.64
SMG8-205ENST00000580798 GFM2Q969S9 779 aaKnown RBP4.81□□□□□ -1.64
SMG8-205ENST00000580798 E2F7Q96AV8 911 aa4.81□□□□□ -1.64
SMG8-205ENST00000580798 SAMD15Q9P1V8 674 aa4.81□□□□□ -1.64
SMG8-205ENST00000580798 MFAP3LO75121 409 aa4.8□□□□□ -1.64
SMG8-205ENST00000580798 RAPGEF3O95398 923 aa4.8□□□□□ -1.64
SMG8-205ENST00000580798 LDHCP07864 332 aa4.8□□□□□ -1.64
SMG8-205ENST00000580798 ATICP31939 592 aa4.8□□□□□ -1.64
SMG8-205ENST00000580798 CASP2P42575 452 aa4.8□□□□□ -1.64
SMG8-205ENST00000580798 MTA1Q13330 715 aa4.8□□□□□ -1.64
SMG8-205ENST00000580798 DGKDQ16760 1214 aa4.8□□□□□ -1.64
SMG8-205ENST00000580798 ARHGAP44Q17R89 818 aa4.8□□□□□ -1.64
SMG8-205ENST00000580798 PRAMEF9Q5VWM5 478 aa4.8□□□□□ -1.64
SMG8-205ENST00000580798 NAIF1Q69YI7 327 aaPredicted RBP4.8□□□□□ -1.64
SMG8-205ENST00000580798 MFSD5Q6N075 450 aa4.8□□□□□ -1.64
SMG8-205ENST00000580798 ZCCHC8Q6NZY4 707 aaKnown RBP4.8□□□□□ -1.64
SMG8-205ENST00000580798 Q6YL49 198 aa4.8□□□□□ -1.64
SMG8-205ENST00000580798 DDX53Q86TM3 631 aaKnown RBP4.8□□□□□ -1.64
SMG8-205ENST00000580798 CXorf67Q86X51 503 aaPredicted RBP4.8□□□□□ -1.64
SMG8-205ENST00000580798 WDR75Q8IWA0 830 aaKnown RBP4.8□□□□□ -1.64
SMG8-205ENST00000580798 LILRB2Q8N423 598 aa4.8□□□□□ -1.64
SMG8-205ENST00000580798 SAMD3Q8N6K7 520 aa4.8□□□□□ -1.64
SMG8-205ENST00000580798 CCDC89Q8N998 374 aa4.8□□□□□ -1.64
SMG8-205ENST00000580798 CHST14Q8NCH0 376 aa4.8□□□□□ -1.64
SMG8-205ENST00000580798 LSM14AQ8ND56 463 aaKnown RBP4.8□□□□□ -1.64
SMG8-205ENST00000580798 MDGA1Q8NFP4 955 aa4.8□□□□□ -1.64
SMG8-205ENST00000580798 MAML3Q96JK9 1138 aa4.8□□□□□ -1.64
SMG8-205ENST00000580798 CASS4Q9NQ75 786 aa4.8□□□□□ -1.64
SMG8-205ENST00000580798 CWC25Q9NXE8 425 aaPredicted RBP4.8□□□□□ -1.64
SMG8-205ENST00000580798 SORCS3Q9UPU3 1222 aa4.8□□□□□ -1.64
SMG8-205ENST00000580798 MRPL42Q9Y6G3 142 aaKnown RBP4.8□□□□□ -1.64
SMG8-205ENST00000580798 UBA6A0AVT1 1052 aaPredicted RBP4.79□□□□□ -1.64
SMG8-205ENST00000580798 IFRD1O00458 451 aaPredicted RBP4.79□□□□□ -1.64
SMG8-205ENST00000580798 TRAPPC10P48553 1259 aa4.79□□□□□ -1.64
SMG8-205ENST00000580798 TERF1P54274 439 aa4.79□□□□□ -1.64
SMG8-205ENST00000580798 NEXNQ0ZGT2 675 aa4.79□□□□□ -1.64
SMG8-205ENST00000580798 GAGE13Q4V321 117 aa4.79□□□□□ -1.64
SMG8-205ENST00000580798 TIGD2Q4W5G0 525 aa4.79□□□□□ -1.64
SMG8-205ENST00000580798 PLEKHG4Q58EX7 1191 aa4.79□□□□□ -1.64
SMG8-205ENST00000580798 ANKRD23Q86SG2 305 aa4.79□□□□□ -1.64
SMG8-205ENST00000580798 CLEC14AQ86T13 490 aa4.79□□□□□ -1.64
SMG8-205ENST00000580798 LCA5Q86VQ0 697 aa4.79□□□□□ -1.64
SMG8-205ENST00000580798 ZSCAN30Q86W11 494 aa4.79□□□□□ -1.64
SMG8-205ENST00000580798 HSCBQ8IWL3 235 aa4.79□□□□□ -1.64
SMG8-205ENST00000580798 TEX19Q8NA77 164 aa4.79□□□□□ -1.64
SMG8-205ENST00000580798 CPT1CQ8TCG5 803 aa4.79□□□□□ -1.64
SMG8-205ENST00000580798 DYDC2Q96IM9 177 aa4.79□□□□□ -1.64
SMG8-205ENST00000580798 ZNF512Q96ME7 567 aaPredicted RBP4.79□□□□□ -1.64
SMG8-205ENST00000580798 CLUHP3Q96NS8 147 aa4.79□□□□□ -1.64
SMG8-205ENST00000580798 PAIP2Q9BPZ3 127 aaKnown RBP4.79□□□□□ -1.64
SMG8-205ENST00000580798 PCIF1Q9H4Z3 704 aa4.79□□□□□ -1.64
SMG8-205ENST00000580798 CYP4F11Q9HBI6 524 aa4.79□□□□□ -1.64
SMG8-205ENST00000580798 POLR3BQ9NW08 1133 aaPredicted RBP4.79□□□□□ -1.64
SMG8-205ENST00000580798 KCMF1Q9P0J7 381 aa4.79□□□□□ -1.64
SMG8-205ENST00000580798 RCAN3Q9UKA8 241 aa4.79□□□□□ -1.64
SMG8-205ENST00000580798 LZTS1Q9Y250 596 aa4.79□□□□□ -1.64
SMG8-205ENST00000580798 PTPDC1A2A3K4 754 aa4.78□□□□□ -1.64
SMG8-205ENST00000580798 B4E1Z4 1266 aa4.78□□□□□ -1.64
SMG8-205ENST00000580798 PLD2O14939 933 aa4.78□□□□□ -1.64
SMG8-205ENST00000580798 IPO13O94829 963 aaKnown RBP4.78□□□□□ -1.64
SMG8-205ENST00000580798 TOX4O94842 621 aa4.78□□□□□ -1.64
SMG8-205ENST00000580798 FGAP02671 866 aa4.78□□□□□ -1.64
SMG8-205ENST00000580798 VIL1P09327 827 aaKnown RBP4.78□□□□□ -1.64
SMG8-205ENST00000580798 PTX3P26022 381 aaPredicted RBP4.78□□□□□ -1.64
SMG8-205ENST00000580798 IGFALSP35858 605 aa4.78□□□□□ -1.64
SMG8-205ENST00000580798 ZNF460Q14592 562 aa4.78□□□□□ -1.64
SMG8-205ENST00000580798 MYBPC3Q14896 1274 aa4.78□□□□□ -1.64
SMG8-205ENST00000580798 CDC37Q16543 378 aaPredicted RBP4.78□□□□□ -1.64
SMG8-205ENST00000580798 MAP9Q49MG5 647 aa4.78□□□□□ -1.64
SMG8-205ENST00000580798 TTC38Q5R3I4 469 aa4.78□□□□□ -1.64
SMG8-205ENST00000580798 ZNF362Q5T0B9 420 aaPredicted RBP4.78□□□□□ -1.64
SMG8-205ENST00000580798 KIAA1958Q8N8K9 716 aa4.78□□□□□ -1.64
SMG8-205ENST00000580798 PLA2G15Q8NCC3 412 aa4.78□□□□□ -1.64
SMG8-205ENST00000580798 VPS37AQ8NEZ2 397 aa4.78□□□□□ -1.64
SMG8-205ENST00000580798 SVIPQ8NHG7 77 aa4.78□□□□□ -1.64
SMG8-205ENST00000580798 C16orf92Q96LL3 132 aa4.78□□□□□ -1.64
SMG8-205ENST00000580798 CFAP53Q96M91 514 aa4.78□□□□□ -1.64
SMG8-205ENST00000580798 WDR92Q96MX6 357 aa4.78□□□□□ -1.64
SMG8-205ENST00000580798 NEUROD6Q96NK8 337 aa4.78□□□□□ -1.64
SMG8-205ENST00000580798 ACSS2Q9NR19 701 aa4.78□□□□□ -1.64
SMG8-205ENST00000580798 RBM28Q9NW13 759 aaKnown RBP4.78□□□□□ -1.64
SMG8-205ENST00000580798 DNAI1Q9UI46 699 aa4.78□□□□□ -1.64
SMG8-205ENST00000580798 TNPO3Q9Y5L0 923 aaKnown RBP4.78□□□□□ -1.64
SMG8-205ENST00000580798 COL11A2P13942 1736 aaPredicted RBP4.77□□□□□ -1.65
SMG8-205ENST00000580798 SYNRGQ9UMZ2 1314 aa4.77□□□□□ -1.65
SMG8-205ENST00000580798 CENPVL1A0A0U1RR11 272 aa4.77□□□□□ -1.65
SMG8-205ENST00000580798 H7C1D1 291 aa4.77□□□□□ -1.65
SMG8-205ENST00000580798 ENPP3O14638 875 aa4.77□□□□□ -1.65
SMG8-205ENST00000580798 DNAJC8O75937 253 aaPredicted RBP4.77□□□□□ -1.65
SMG8-205ENST00000580798 VSIG10L2P0DP72 767 aa4.77□□□□□ -1.65
SMG8-205ENST00000580798 HNRNPLP14866 589 aaKnown RBP eCLIP4.77□□□□□ -1.65
SMG8-205ENST00000580798 TAP1Q03518 808 aa4.77□□□□□ -1.65
SMG8-205ENST00000580798 ZKSCAN8Q15776 578 aaPredicted RBP4.77□□□□□ -1.65
SMG8-205ENST00000580798 KRT40Q6A162 431 aa4.77□□□□□ -1.65
SMG8-205ENST00000580798 HDGFL2Q7Z4V5 671 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms