RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 PGBD1Q96JS3 809 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 B3GALT6Q96L58 329 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 TMEM175Q9BSA9 504 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 PHF20Q9BVI0 1012 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 LSM14BQ9BX40 385 aaKnown RBP8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 PLEKHA4Q9H4M7 779 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 CNNM2Q9H8M5 875 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 LY9Q9HBG7 655 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 CHST12Q9NRB3 414 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 FAM105AQ9NUU6 356 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 STK39Q9UEW8 545 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 FAN1Q9Y2M0 1017 aa8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 MAFBQ9Y5Q3 323 aaPredicted RBP8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 TDRD15B5MCY1 1934 aaKnown RBP8.7□□□□□ -1.02
SMARCE1-217ENST00000580654 PDCD11Q14690 1871 aaKnown RBP8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 SPDYE3A6NKU9 549 aa8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 CHURC1-FNTBB4DL54 471 aa8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 MEIS1O00470 390 aa8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 GIPC1O14908 333 aa8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 MAGEB2O15479 319 aa8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 FOXD2O60548 495 aaPredicted RBP8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 ZMYND10O75800 440 aa8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 C1RP00736 705 aa8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 ALDH2P05091 517 aa8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 SDSP20132 328 aa8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 FNTBP49356 437 aa8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 IMMTQ16891 758 aaKnown RBP8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 CEP55Q53EZ4 464 aa8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 TWF2Q6IBS0 349 aaKnown RBP8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 PSAPL1Q6NUJ1 521 aa8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 ELMSAN1Q6PJG2 1045 aa8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 ZNF852Q6ZMS4 543 aa8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 GLYCTKQ8IVS8 523 aa8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 RRP36Q96EU6 259 aaKnown RBP8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 MBOAT7Q96N66 472 aa8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 MAP7D2Q96T17 732 aa8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 CHST7Q9NS84 486 aa8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 NDRG2Q9UN36 371 aaKnown RBP8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 SSX2IPQ9Y2D8 614 aa8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 PRG3Q9Y2Y8 225 aaPredicted RBP8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 PCDHB15Q9Y5E8 787 aa8.69□□□□□ -1.02
SMARCE1-217ENST00000580654 EML5Q05BV3 1969 aa8.68□□□□□ -1.02
SMARCE1-217ENST00000580654 CYSRT1A8MQ03 144 aa8.68□□□□□ -1.02
SMARCE1-217ENST00000580654 K7ESF4 209 aa8.68□□□□□ -1.02
SMARCE1-217ENST00000580654 PLEKHA8P1O95397 391 aa8.68□□□□□ -1.02
SMARCE1-217ENST00000580654 POMCP01189 267 aa8.68□□□□□ -1.02
SMARCE1-217ENST00000580654 ZNF806P0C7X5 589 aa8.68□□□□□ -1.02
SMARCE1-217ENST00000580654 RPL17P18621 184 aaKnown RBP8.68□□□□□ -1.02
SMARCE1-217ENST00000580654 KIF5BP33176 963 aa8.68□□□□□ -1.02
SMARCE1-217ENST00000580654 CCR3P51677 355 aa8.68□□□□□ -1.02
SMARCE1-217ENST00000580654 MFAP1P55081 439 aaKnown RBP8.68□□□□□ -1.02
SMARCE1-217ENST00000580654 FOXC1Q12948 553 aa8.68□□□□□ -1.02
SMARCE1-217ENST00000580654 MIS18BP1Q6P0N0 1132 aa8.68□□□□□ -1.02
SMARCE1-217ENST00000580654 NPAS3Q8IXF0 933 aa8.68□□□□□ -1.02
SMARCE1-217ENST00000580654 CKAP2LQ8IYA6 745 aa8.68□□□□□ -1.02
SMARCE1-217ENST00000580654 COLGALT2Q8IYK4 626 aa8.68□□□□□ -1.02
SMARCE1-217ENST00000580654 CMTR1Q8N1G2 835 aaKnown RBP8.68□□□□□ -1.02
SMARCE1-217ENST00000580654 SRBD1Q8N5C6 995 aaKnown RBP8.68□□□□□ -1.02
SMARCE1-217ENST00000580654 NLRP7Q8WX94 980 aa8.68□□□□□ -1.02
SMARCE1-217ENST00000580654 DSCC1Q9BVC3 393 aa8.68□□□□□ -1.02
SMARCE1-217ENST00000580654 IL25Q9H293 177 aa8.68□□□□□ -1.02
SMARCE1-217ENST00000580654 ARRDC1-AS1Q9H2J1 176 aa8.68□□□□□ -1.02
SMARCE1-217ENST00000580654 SMOC1Q9H4F8 434 aa8.68□□□□□ -1.02
SMARCE1-217ENST00000580654 LAMA1P25391 3075 aa8.68□□□□□ -1.02
SMARCE1-217ENST00000580654 hCG_1642624A0A1W2PR95 340 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 IFIT3O14879 490 aaKnown RBP8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 AXIN1O15169 862 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 ZNF862O60290 1169 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 SKIP12755 728 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 TMOD1P28289 359 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 SMARCA1P28370 1054 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 HNRNPUQ00839 825 aaKnown RBP eCLIP8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 NBR1Q14596 966 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 WDR44Q5JSH3 913 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 SPAG17Q6Q759 2223 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 CWC27Q6UX04 472 aaKnown RBP8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 MRPL10Q7Z7H8 261 aaKnown RBP8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 LONP2Q86WA8 852 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 URGCPQ8TCY9 931 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 ZCCHC14Q8WYQ9 949 aaKnown RBP8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 FAM193BQ96PV7 902 aaPredicted RBP8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 IER2Q9BTL4 223 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 GPR62Q9BZJ7 368 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 RSAD1Q9HA92 442 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 LMAN1LQ9HAT1 526 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 IL21Q9HBE4 155 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 HCFC1R1Q9NWW0 138 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 C2orf42Q9NWW7 574 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 FNIP2Q9P278 1114 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 GABBR1Q9UBS5 961 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 FBXW11Q9UKB1 542 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 CEP131Q9UPN4 1083 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 PIN4Q9Y237 131 aaKnown RBP8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 MRPS17Q9Y2R5 130 aaKnown RBP8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 PCDHB2Q9Y5E7 798 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 TAF6LQ9Y6J9 622 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 FREM2Q5SZK8 3169 aa8.67□□□□□ -1.02
SMARCE1-217ENST00000580654 IGLV3-22A0A075B6J6 115 aa8.66□□□□□ -1.02
SMARCE1-217ENST00000580654 A0A087WZ62 844 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms