RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 LARP1BQ659C4 914 aaKnown RBP15.88■□□□□ 0.13
CSNK1D-213ENST00000580446 CATSPER4Q7RTX7 472 aa15.88■□□□□ 0.13
CSNK1D-213ENST00000580446 WDR5BQ86VZ2 330 aa15.88■□□□□ 0.13
CSNK1D-213ENST00000580446 KSR1Q8IVT5 923 aa15.88■□□□□ 0.13
CSNK1D-213ENST00000580446 TTC8Q8TAM2 541 aa15.88■□□□□ 0.13
CSNK1D-213ENST00000580446 DNASE1L2Q92874 299 aa15.88■□□□□ 0.13
CSNK1D-213ENST00000580446 MBOAT7Q96N66 472 aa15.88■□□□□ 0.13
CSNK1D-213ENST00000580446 SH2D3AQ9BRG2 576 aa15.88■□□□□ 0.13
CSNK1D-213ENST00000580446 LY9Q9HBG7 655 aa15.88■□□□□ 0.13
CSNK1D-213ENST00000580446 POLR3BQ9NW08 1133 aaPredicted RBP15.88■□□□□ 0.13
CSNK1D-213ENST00000580446 SEC63Q9UGP8 760 aaKnown RBP15.88■□□□□ 0.13
CSNK1D-213ENST00000580446 MAFBQ9Y5Q3 323 aaPredicted RBP15.88■□□□□ 0.13
CSNK1D-213ENST00000580446 SALL3Q9BXA9 1300 aa15.88■□□□□ 0.13
CSNK1D-213ENST00000580446 GREB1Q4ZG55 1949 aa15.88■□□□□ 0.13
CSNK1D-213ENST00000580446 TMEM150BA6NC51 233 aa15.87■□□□□ 0.13
CSNK1D-213ENST00000580446 DHX15O43143 795 aaKnown RBP15.87■□□□□ 0.13
CSNK1D-213ENST00000580446 EXTL3O43909 919 aa15.87■□□□□ 0.13
CSNK1D-213ENST00000580446 CCDC192P0DO97 292 aa15.87■□□□□ 0.13
CSNK1D-213ENST00000580446 PTGDRQ13258 359 aa15.87■□□□□ 0.13
CSNK1D-213ENST00000580446 CEP55Q53EZ4 464 aa15.87■□□□□ 0.13
CSNK1D-213ENST00000580446 FUT10Q6P4F1 479 aa15.87■□□□□ 0.13
CSNK1D-213ENST00000580446 CACNA2D4Q7Z3S7 1137 aa15.87■□□□□ 0.13
CSNK1D-213ENST00000580446 GAB3Q8WWW8 586 aa15.87■□□□□ 0.13
CSNK1D-213ENST00000580446 PGBD4Q96DM1 585 aa15.87■□□□□ 0.13
CSNK1D-213ENST00000580446 CRELD1Q96HD1 420 aa15.87■□□□□ 0.13
CSNK1D-213ENST00000580446 IER2Q9BTL4 223 aa15.87■□□□□ 0.13
CSNK1D-213ENST00000580446 TRAIPQ9BWF2 469 aa15.87■□□□□ 0.13
CSNK1D-213ENST00000580446 VPS45Q9NRW7 570 aa15.87■□□□□ 0.13
CSNK1D-213ENST00000580446 MIOSQ9NXC5 875 aa15.87■□□□□ 0.13
CSNK1D-213ENST00000580446 DACH1Q9UI36 760 aa15.87■□□□□ 0.13
CSNK1D-213ENST00000580446 MSRB2Q9Y3D2 182 aa15.87■□□□□ 0.13
CSNK1D-213ENST00000580446 LNP1A1A4G5 178 aa15.86■□□□□ 0.13
CSNK1D-213ENST00000580446 IFIT3O14879 490 aaKnown RBP15.86■□□□□ 0.13
CSNK1D-213ENST00000580446 ZNF623O75123 536 aa15.86■□□□□ 0.13
CSNK1D-213ENST00000580446 XYLBO75191 536 aa15.86■□□□□ 0.13
CSNK1D-213ENST00000580446 MS4A1P11836 297 aa15.86■□□□□ 0.13
CSNK1D-213ENST00000580446 SKIP12755 728 aa15.86■□□□□ 0.13
CSNK1D-213ENST00000580446 SFPQP23246 707 aaKnown RBP eCLIP15.86■□□□□ 0.13
CSNK1D-213ENST00000580446 MLH1P40692 756 aa15.86■□□□□ 0.13
CSNK1D-213ENST00000580446 SCNN1GP51170 649 aa15.86■□□□□ 0.13
CSNK1D-213ENST00000580446 FAM78AQ5JUQ0 283 aa15.86■□□□□ 0.13
CSNK1D-213ENST00000580446 DAB2IPQ5VWQ8 1189 aa15.86■□□□□ 0.13
CSNK1D-213ENST00000580446 PKN3Q6P5Z2 889 aa15.86■□□□□ 0.13
CSNK1D-213ENST00000580446 RAB11FIP4Q86YS3 637 aa15.86■□□□□ 0.13
CSNK1D-213ENST00000580446 HASPINQ8TF76 798 aa15.86■□□□□ 0.13
CSNK1D-213ENST00000580446 ZFP42Q96MM3 310 aa15.86■□□□□ 0.13
CSNK1D-213ENST00000580446 GAD1Q99259 594 aa15.86■□□□□ 0.13
CSNK1D-213ENST00000580446 RNF39Q9H2S5 420 aa15.86■□□□□ 0.13
CSNK1D-213ENST00000580446 ZNF334Q9HCZ1 680 aaPredicted RBP15.86■□□□□ 0.13
CSNK1D-213ENST00000580446 NCANO14594 1321 aa15.86■□□□□ 0.13
CSNK1D-213ENST00000580446 SLC38A8A6NNN8 435 aa15.85■□□□□ 0.13
CSNK1D-213ENST00000580446 DCLK1O15075 740 aa15.85■□□□□ 0.13
CSNK1D-213ENST00000580446 ZNF862O60290 1169 aa15.85■□□□□ 0.13
CSNK1D-213ENST00000580446 CAPNS1P04632 268 aa15.85■□□□□ 0.13
CSNK1D-213ENST00000580446 HNRNPA1P09651 372 aaKnown RBP eCLIP15.85■□□□□ 0.13
CSNK1D-213ENST00000580446 CEACAM1P13688 526 aa15.85■□□□□ 0.13
CSNK1D-213ENST00000580446 RAB27AP51159 221 aa15.85■□□□□ 0.13
CSNK1D-213ENST00000580446 CREB5Q02930 508 aa15.85■□□□□ 0.13
CSNK1D-213ENST00000580446 UGCGQ16739 394 aa15.85■□□□□ 0.13
CSNK1D-213ENST00000580446 IMMTQ16891 758 aaKnown RBP15.85■□□□□ 0.13
CSNK1D-213ENST00000580446 USP41Q3LFD5 358 aa15.85■□□□□ 0.13
CSNK1D-213ENST00000580446 UBXN11Q5T124 520 aa15.85■□□□□ 0.13
CSNK1D-213ENST00000580446 RILPL2Q969X0 211 aa15.85■□□□□ 0.13
CSNK1D-213ENST00000580446 ELSPBP1Q96BH3 223 aa15.85■□□□□ 0.13
CSNK1D-213ENST00000580446 TCEAL4Q96EI5 215 aa15.85■□□□□ 0.13
CSNK1D-213ENST00000580446 LOXL4Q96JB6 756 aa15.85■□□□□ 0.13
CSNK1D-213ENST00000580446 NLRP4Q96MN2 994 aa15.85■□□□□ 0.13
CSNK1D-213ENST00000580446 CLSTN3Q9BQT9 956 aa15.85■□□□□ 0.13
CSNK1D-213ENST00000580446 TRMT61BQ9BVS5 477 aaKnown RBP15.85■□□□□ 0.13
CSNK1D-213ENST00000580446 FNIP2Q9P278 1114 aa15.85■□□□□ 0.13
CSNK1D-213ENST00000580446 CEP131Q9UPN4 1083 aa15.85■□□□□ 0.13
CSNK1D-213ENST00000580446 HES2Q9Y543 173 aa15.85■□□□□ 0.13
CSNK1D-213ENST00000580446 TICRRQ7Z2Z1 1910 aa15.85■□□□□ 0.13
CSNK1D-213ENST00000580446 MEIS1O00470 390 aa15.84■□□□□ 0.13
CSNK1D-213ENST00000580446 VIPR2P41587 438 aa15.84■□□□□ 0.13
CSNK1D-213ENST00000580446 FGD1P98174 961 aa15.84■□□□□ 0.13
CSNK1D-213ENST00000580446 TXNDC11Q6PKC3 985 aa15.84■□□□□ 0.13
CSNK1D-213ENST00000580446 VITQ6UXI7 678 aa15.84■□□□□ 0.13
CSNK1D-213ENST00000580446 CEP57Q86XR8 500 aa15.84■□□□□ 0.13
CSNK1D-213ENST00000580446 CHCHD4Q8N4Q1 142 aa15.84■□□□□ 0.13
CSNK1D-213ENST00000580446 CCDC82Q8N4S0 544 aa15.84■□□□□ 0.13
CSNK1D-213ENST00000580446 SRBD1Q8N5C6 995 aaKnown RBP15.84■□□□□ 0.13
CSNK1D-213ENST00000580446 RSPH1Q8WYR4 309 aa15.84■□□□□ 0.13
CSNK1D-213ENST00000580446 APOL6Q9BWW8 343 aa15.84■□□□□ 0.13
CSNK1D-213ENST00000580446 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.84■□□□□ 0.13
CSNK1D-213ENST00000580446 CACNA2D2Q9NY47 1150 aa15.84■□□□□ 0.13
CSNK1D-213ENST00000580446 KALRNO60229 2985 aa15.84■□□□□ 0.13
CSNK1D-213ENST00000580446 CFAP46Q8IYW2 2715 aa15.83■□□□□ 0.13
CSNK1D-213ENST00000580446 COL4A2P08572 1712 aa15.83■□□□□ 0.13
CSNK1D-213ENST00000580446 PATE3B3GLJ2 98 aa15.83■□□□□ 0.12
CSNK1D-213ENST00000580446 FAM86B1E9PN63 330 aa15.83■□□□□ 0.12
CSNK1D-213ENST00000580446 PAPSS2O95340 614 aaPredicted RBP15.83■□□□□ 0.12
CSNK1D-213ENST00000580446 OATP04181 439 aa15.83■□□□□ 0.12
CSNK1D-213ENST00000580446 RHOP08100 348 aa15.83■□□□□ 0.12
CSNK1D-213ENST00000580446 FAM86B2P0C5J1 330 aa15.83■□□□□ 0.12
CSNK1D-213ENST00000580446 RXRAP19793 462 aa15.83■□□□□ 0.12
CSNK1D-213ENST00000580446 ZNF76P36508 570 aa15.83■□□□□ 0.12
CSNK1D-213ENST00000580446 PRKCEQ02156 737 aa15.83■□□□□ 0.12
CSNK1D-213ENST00000580446 DSC1Q08554 894 aa15.83■□□□□ 0.12
CSNK1D-213ENST00000580446 SCAPQ12770 1279 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms