RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 RXFP3Q9NSD7 469 aa14.8□□□□□ -0.04
CDK5RAP3-213ENST00000579605 AGPAT5Q9NUQ2 364 aa14.8□□□□□ -0.04
CDK5RAP3-213ENST00000579605 HCFC1R1Q9NWW0 138 aa14.8□□□□□ -0.04
CDK5RAP3-213ENST00000579605 FNIP2Q9P278 1114 aa14.8□□□□□ -0.04
CDK5RAP3-213ENST00000579605 SLC12A7Q9Y666 1083 aa14.8□□□□□ -0.04
CDK5RAP3-213ENST00000579605 FRYQ5TBA9 3013 aa14.8□□□□□ -0.04
CDK5RAP3-213ENST00000579605 ARL5CA6NH57 179 aa14.79□□□□□ -0.04
CDK5RAP3-213ENST00000579605 SOBPA7XYQ1 873 aa14.79□□□□□ -0.04
CDK5RAP3-213ENST00000579605 C1RP00736 705 aa14.79□□□□□ -0.04
CDK5RAP3-213ENST00000579605 MLH1P40692 756 aa14.79□□□□□ -0.04
CDK5RAP3-213ENST00000579605 CXCL12P48061 93 aa14.79□□□□□ -0.04
CDK5RAP3-213ENST00000579605 CLK2P49760 499 aaKnown RBP14.79□□□□□ -0.04
CDK5RAP3-213ENST00000579605 SCNN1GP51170 649 aa14.79□□□□□ -0.04
CDK5RAP3-213ENST00000579605 CCR3P51677 355 aa14.79□□□□□ -0.04
CDK5RAP3-213ENST00000579605 TARBP2Q15633 366 aaKnown RBP14.79□□□□□ -0.04
CDK5RAP3-213ENST00000579605 MICU3Q86XE3 530 aa14.79□□□□□ -0.04
CDK5RAP3-213ENST00000579605 NPAS3Q8IXF0 933 aa14.79□□□□□ -0.04
CDK5RAP3-213ENST00000579605 MBOAT7Q96N66 472 aa14.79□□□□□ -0.04
CDK5RAP3-213ENST00000579605 APOL6Q9BWW8 343 aa14.79□□□□□ -0.04
CDK5RAP3-213ENST00000579605 LRRC2Q9BYS8 371 aa14.79□□□□□ -0.04
CDK5RAP3-213ENST00000579605 ARRDC1-AS1Q9H2J1 176 aa14.79□□□□□ -0.04
CDK5RAP3-213ENST00000579605 V9GY48 417 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-213ENST00000579605 PKD1L2Q7Z442 2459 aa14.78□□□□□ -0.04
CDK5RAP3-213ENST00000579605 DDX11L8A8MPP1 907 aa14.78□□□□□ -0.04
CDK5RAP3-213ENST00000579605 MAN2B1O00754 1011 aa14.78□□□□□ -0.04
CDK5RAP3-213ENST00000579605 TM4SF5O14894 197 aa14.78□□□□□ -0.04
CDK5RAP3-213ENST00000579605 FOXD2O60548 495 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-213ENST00000579605 XYLBO75191 536 aa14.78□□□□□ -0.04
CDK5RAP3-213ENST00000579605 KCNK5O95279 499 aa14.78□□□□□ -0.04
CDK5RAP3-213ENST00000579605 CYP3A4P08684 503 aa14.78□□□□□ -0.04
CDK5RAP3-213ENST00000579605 HNRNPA1P09651 372 aaKnown RBP eCLIP14.78□□□□□ -0.048e-6■□□□□ 10.1
CDK5RAP3-213ENST00000579605 SRGAP2CP0DJJ0 459 aa14.78□□□□□ -0.04
CDK5RAP3-213ENST00000579605 SPINK2P20155 84 aa14.78□□□□□ -0.04
CDK5RAP3-213ENST00000579605 SETQ01105 290 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-213ENST00000579605 GRM2Q14416 872 aa14.78□□□□□ -0.04
CDK5RAP3-213ENST00000579605 TANGO2Q6ICL3 276 aa14.78□□□□□ -0.04
CDK5RAP3-213ENST00000579605 PPP1R18Q6NYC8 613 aa14.78□□□□□ -0.04
CDK5RAP3-213ENST00000579605 CEP57Q86XR8 500 aa14.78□□□□□ -0.04
CDK5RAP3-213ENST00000579605 FAM160A2Q8N612 972 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-213ENST00000579605 SMG8Q8ND04 991 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP3-213ENST00000579605 MAP4K1Q92918 833 aa14.78□□□□□ -0.04
CDK5RAP3-213ENST00000579605 ZFP42Q96MM3 310 aa14.78□□□□□ -0.04
CDK5RAP3-213ENST00000579605 UBN1Q9NPG3 1134 aa14.78□□□□□ -0.04
CDK5RAP3-213ENST00000579605 FBXW11Q9UKB1 542 aa14.78□□□□□ -0.04
CDK5RAP3-213ENST00000579605 MRPS23Q9Y3D9 190 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP3-213ENST00000579605 HES2Q9Y543 173 aa14.78□□□□□ -0.04
CDK5RAP3-213ENST00000579605 MYH15Q9Y2K3 1946 aa14.77□□□□□ -0.04
CDK5RAP3-213ENST00000579605 ADAMTS3O15072 1205 aa14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 TADA2AO75478 443 aa14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 ECI2O75521 394 aa14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 HOXA11P31270 313 aaPredicted RBP14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 MCM5P33992 734 aa14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 CREMQ03060 361 aa14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 DSC1Q08554 894 aa14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 FOXC1Q12948 553 aa14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 PABPC1LQ4VXU2 614 aaKnown RBP14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 RTP2Q5QGT7 225 aa14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 STPG1Q5TH74 334 aa14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 PSAPL1Q6NUJ1 521 aa14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 LRSAM1Q6UWE0 723 aa14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 ZNF687Q8N1G0 1237 aa14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 SLC7A14Q8TBB6 771 aa14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 FAM3CQ92520 227 aa14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 GJA10Q969M2 543 aa14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 EIF2AQ9BY44 585 aaKnown RBP14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 BRD9Q9H8M2 597 aa14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 MINDY3Q9H8M7 445 aa14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 IFT122Q9HBG6 1241 aa14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 DNMT3BQ9UBC3 853 aaKnown RBP14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 LHX6Q9UPM6 363 aa14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 IPPQ9Y573 584 aa14.77□□□□□ -0.05
CDK5RAP3-213ENST00000579605 FASNP49327 2511 aaKnown RBP14.76□□□□□ -0.05
CDK5RAP3-213ENST00000579605 ANKRD11Q6UB99 2663 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP3-213ENST00000579605 CNTNAP5Q8WYK1 1306 aa14.76□□□□□ -0.05
CDK5RAP3-213ENST00000579605 IGKV6-21A0A0C4DH24 114 aa14.76□□□□□ -0.05
CDK5RAP3-213ENST00000579605 LIMK1P53667 647 aa14.76□□□□□ -0.05
CDK5RAP3-213ENST00000579605 XKR3Q5GH77 459 aa14.76□□□□□ -0.05
CDK5RAP3-213ENST00000579605 KDF1Q8NAX2 398 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP3-213ENST00000579605 HASPINQ8TF76 798 aa14.76□□□□□ -0.05
CDK5RAP3-213ENST00000579605 RUFY2Q8WXA3 655 aa14.76□□□□□ -0.05
CDK5RAP3-213ENST00000579605 CRYGNQ8WXF5 182 aa14.76□□□□□ -0.05
CDK5RAP3-213ENST00000579605 TMEM87BQ96K49 555 aa14.76□□□□□ -0.05
CDK5RAP3-213ENST00000579605 CLSTN3Q9BQT9 956 aa14.76□□□□□ -0.05
CDK5RAP3-213ENST00000579605 NIFKQ9BYG3 293 aaKnown RBP14.76□□□□□ -0.05
CDK5RAP3-213ENST00000579605 GLT8D2Q9H1C3 349 aa14.76□□□□□ -0.05
CDK5RAP3-213ENST00000579605 UNC45AQ9H3U1 944 aa14.76□□□□□ -0.05
CDK5RAP3-213ENST00000579605 BARHL2Q9NY43 387 aa14.76□□□□□ -0.05
CDK5RAP3-213ENST00000579605 CACNG4Q9UBN1 327 aa14.76□□□□□ -0.05
CDK5RAP3-213ENST00000579605 ADAM28Q9UKQ2 775 aa14.76□□□□□ -0.05
CDK5RAP3-213ENST00000579605 SRRM3A6NNA2 597 aaPredicted RBP14.75□□□□□ -0.05
CDK5RAP3-213ENST00000579605 ADAM12O43184 909 aa14.75□□□□□ -0.05
CDK5RAP3-213ENST00000579605 GAS7O60861 476 aa14.75□□□□□ -0.05
CDK5RAP3-213ENST00000579605 MAFO75444 373 aaPredicted RBP14.75□□□□□ -0.05
CDK5RAP3-213ENST00000579605 HOXC13P31276 330 aa14.75□□□□□ -0.05
CDK5RAP3-213ENST00000579605 RING1Q06587 406 aa14.75□□□□□ -0.05
CDK5RAP3-213ENST00000579605 GAS6Q14393 721 aa14.75□□□□□ -0.05
CDK5RAP3-213ENST00000579605 AXDND1Q5T1B0 1012 aaPredicted RBP14.75□□□□□ -0.05
CDK5RAP3-213ENST00000579605 TTC22Q5TAA0 569 aa14.75□□□□□ -0.05
CDK5RAP3-213ENST00000579605 POTEHQ6S545 545 aa14.75□□□□□ -0.05
CDK5RAP3-213ENST00000579605 SYNE3Q6ZMZ3 975 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms