RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 USP41Q3LFD5 358 aa15.55■□□□□ 0.08
CSNK1D-211ENST00000579316 NPAS3Q8IXF0 933 aa15.55■□□□□ 0.08
CSNK1D-211ENST00000579316 DNASE1L2Q92874 299 aa15.55■□□□□ 0.08
CSNK1D-211ENST00000579316 B3GALT6Q96L58 329 aa15.55■□□□□ 0.08
CSNK1D-211ENST00000579316 IFT122Q9HBG6 1241 aa15.55■□□□□ 0.08
CSNK1D-211ENST00000579316 SUCLA2Q9P2R7 463 aaPredicted RBP15.55■□□□□ 0.08
CSNK1D-211ENST00000579316 KCNH3Q9ULD8 1083 aa15.55■□□□□ 0.08
CSNK1D-211ENST00000579316 NOTCH4Q99466 2003 aa15.55■□□□□ 0.08
CSNK1D-211ENST00000579316 STBD1O95210 358 aa15.54■□□□□ 0.08
CSNK1D-211ENST00000579316 SFNP31947 248 aa15.54■□□□□ 0.08
CSNK1D-211ENST00000579316 CIITAP33076 1130 aa15.54■□□□□ 0.08
CSNK1D-211ENST00000579316 MCM5P33992 734 aa15.54■□□□□ 0.08
CSNK1D-211ENST00000579316 CCR3P51677 355 aa15.54■□□□□ 0.08
CSNK1D-211ENST00000579316 JAKMIP3Q5VZ66 844 aa15.54■□□□□ 0.08
CSNK1D-211ENST00000579316 IL31Q6EBC2 164 aa15.54■□□□□ 0.08
CSNK1D-211ENST00000579316 FUT10Q6P4F1 479 aa15.54■□□□□ 0.08
CSNK1D-211ENST00000579316 PRR23BQ6ZRT6 265 aa15.54■□□□□ 0.08
CSNK1D-211ENST00000579316 SGMS1Q86VZ5 419 aa15.54■□□□□ 0.08
CSNK1D-211ENST00000579316 RAB11FIP4Q86YS3 637 aa15.54■□□□□ 0.08
CSNK1D-211ENST00000579316 RHPN2Q8IUC4 686 aa15.54■□□□□ 0.08
CSNK1D-211ENST00000579316 SMG8Q8ND04 991 aaKnown RBP15.54■□□□□ 0.08
CSNK1D-211ENST00000579316 CNNM3Q8NE01 707 aa15.54■□□□□ 0.08
CSNK1D-211ENST00000579316 ITFG1Q8TB96 612 aa15.54■□□□□ 0.08
CSNK1D-211ENST00000579316 MAP4K1Q92918 833 aa15.54■□□□□ 0.08
CSNK1D-211ENST00000579316 GPR62Q9BZJ7 368 aa15.54■□□□□ 0.08
CSNK1D-211ENST00000579316 ARL5CA6NH57 179 aa15.53■□□□□ 0.08
CSNK1D-211ENST00000579316 MAFO75444 373 aaPredicted RBP15.53■□□□□ 0.08
CSNK1D-211ENST00000579316 IGHDP01880 384 aa15.53■□□□□ 0.08
CSNK1D-211ENST00000579316 RPL17P18621 184 aaKnown RBP15.53■□□□□ 0.08
CSNK1D-211ENST00000579316 KCNA4P22459 653 aa15.53■□□□□ 0.08
CSNK1D-211ENST00000579316 CNR2P34972 360 aa15.53■□□□□ 0.08
CSNK1D-211ENST00000579316 JAK3P52333 1124 aa15.53■□□□□ 0.08
CSNK1D-211ENST00000579316 SIM2Q14190 667 aaPredicted RBP15.53■□□□□ 0.08
CSNK1D-211ENST00000579316 MTERF2Q49AM1 385 aa15.53■□□□□ 0.08
CSNK1D-211ENST00000579316 PRR16Q569H4 304 aa15.53■□□□□ 0.08
CSNK1D-211ENST00000579316 XKR3Q5GH77 459 aa15.53■□□□□ 0.08
CSNK1D-211ENST00000579316 LIN9Q5TKA1 542 aa15.53■□□□□ 0.08
CSNK1D-211ENST00000579316 B4GALNT3Q6L9W6 998 aa15.53■□□□□ 0.08
CSNK1D-211ENST00000579316 MICU3Q86XE3 530 aa15.53■□□□□ 0.08
CSNK1D-211ENST00000579316 GLYCTKQ8IVS8 523 aa15.53■□□□□ 0.08
CSNK1D-211ENST00000579316 KSR1Q8IVT5 923 aa15.53■□□□□ 0.08
CSNK1D-211ENST00000579316 KDF1Q8NAX2 398 aaPredicted RBP15.53■□□□□ 0.08
CSNK1D-211ENST00000579316 RUFY2Q8WXA3 655 aa15.53■□□□□ 0.08
CSNK1D-211ENST00000579316 NLRP4Q96MN2 994 aa15.53■□□□□ 0.08
CSNK1D-211ENST00000579316 RIT2Q99578 217 aa15.53■□□□□ 0.08
CSNK1D-211ENST00000579316 COLEC11Q9BWP8 271 aa15.53■□□□□ 0.08
CSNK1D-211ENST00000579316 HEBP1Q9NRV9 189 aa15.53■□□□□ 0.08
CSNK1D-211ENST00000579316 SEPT9Q9UHD8 586 aaPredicted RBP15.53■□□□□ 0.08
CSNK1D-211ENST00000579316 MAN2B1O00754 1011 aa15.52■□□□□ 0.08
CSNK1D-211ENST00000579316 XYLBO75191 536 aa15.52■□□□□ 0.08
CSNK1D-211ENST00000579316 NR1I2O75469 434 aa15.52■□□□□ 0.08
CSNK1D-211ENST00000579316 PPM1LQ5SGD2 360 aa15.52■□□□□ 0.08
CSNK1D-211ENST00000579316 RDM1Q8NG50 284 aa15.52■□□□□ 0.08
CSNK1D-211ENST00000579316 GAD1Q99259 594 aa15.52■□□□□ 0.08
CSNK1D-211ENST00000579316 RBM28Q9NW13 759 aaKnown RBP15.52■□□□□ 0.08
CSNK1D-211ENST00000579316 ZMIZ1Q9ULJ6 1067 aa15.52■□□□□ 0.08
CSNK1D-211ENST00000579316 GREB1Q4ZG55 1949 aa15.52■□□□□ 0.07
CSNK1D-211ENST00000579316 DSPP15924 2871 aaKnown RBP15.52■□□□□ 0.07
CSNK1D-211ENST00000579316 COL4A2P08572 1712 aa15.51■□□□□ 0.07
CSNK1D-211ENST00000579316 FLNBO75369 2602 aaKnown RBP15.51■□□□□ 0.07
CSNK1D-211ENST00000579316 ESYT2A0FGR8 921 aa15.51■□□□□ 0.07
CSNK1D-211ENST00000579316 HRO43593 1189 aa15.51■□□□□ 0.07
CSNK1D-211ENST00000579316 C8AP07357 584 aa15.51■□□□□ 0.07
CSNK1D-211ENST00000579316 ITGA4P13612 1032 aa15.51■□□□□ 0.07
CSNK1D-211ENST00000579316 MLH1P40692 756 aa15.51■□□□□ 0.07
CSNK1D-211ENST00000579316 UNQ6494/PRO21346Q6UXR6 183 aa15.51■□□□□ 0.07
CSNK1D-211ENST00000579316 SRGAP1Q7Z6B7 1085 aa15.51■□□□□ 0.07
CSNK1D-211ENST00000579316 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.51■□□□□ 0.07
CSNK1D-211ENST00000579316 JPH2Q9BR39 696 aaPredicted RBP15.51■□□□□ 0.07
CSNK1D-211ENST00000579316 GDE1Q9NZC3 331 aa15.51■□□□□ 0.07
CSNK1D-211ENST00000579316 ADAM28Q9UKQ2 775 aa15.51■□□□□ 0.07
CSNK1D-211ENST00000579316 IPPQ9Y573 584 aa15.51■□□□□ 0.07
CSNK1D-211ENST00000579316 V9GY48 417 aaPredicted RBP15.51■□□□□ 0.07
CSNK1D-211ENST00000579316 TDRD15B5MCY1 1934 aaKnown RBP15.51■□□□□ 0.07
CSNK1D-211ENST00000579316 GCN1Q92616 2671 aaKnown RBP15.51■□□□□ 0.07
CSNK1D-211ENST00000579316 TMEM150BA6NC51 233 aa15.5■□□□□ 0.07
CSNK1D-211ENST00000579316 SOBPA7XYQ1 873 aa15.5■□□□□ 0.07
CSNK1D-211ENST00000579316 MSH4O15457 936 aa15.5■□□□□ 0.07
CSNK1D-211ENST00000579316 CCL16O15467 120 aa15.5■□□□□ 0.07
CSNK1D-211ENST00000579316 PAPSS2O95340 614 aaPredicted RBP15.5■□□□□ 0.07
CSNK1D-211ENST00000579316 SCNN1GP51170 649 aa15.5■□□□□ 0.07
CSNK1D-211ENST00000579316 RTP2Q5QGT7 225 aa15.5■□□□□ 0.07
CSNK1D-211ENST00000579316 SLC5A5Q92911 643 aa15.5■□□□□ 0.07
CSNK1D-211ENST00000579316 ZFP42Q96MM3 310 aa15.5■□□□□ 0.07
CSNK1D-211ENST00000579316 CLSTN3Q9BQT9 956 aa15.5■□□□□ 0.07
CSNK1D-211ENST00000579316 PLA2G2FQ9BZM2 168 aa15.5■□□□□ 0.07
CSNK1D-211ENST00000579316 RNF39Q9H2S5 420 aa15.5■□□□□ 0.07
CSNK1D-211ENST00000579316 UNC45AQ9H3U1 944 aa15.5■□□□□ 0.07
CSNK1D-211ENST00000579316 MINDY3Q9H8M7 445 aa15.5■□□□□ 0.07
CSNK1D-211ENST00000579316 MIOSQ9NXC5 875 aa15.5■□□□□ 0.07
CSNK1D-211ENST00000579316 COL4A3BPQ9Y5P4 624 aa15.5■□□□□ 0.07
CSNK1D-211ENST00000579316 ZMYM2Q9UBW7 1377 aa15.49■□□□□ 0.07
CSNK1D-211ENST00000579316 WDFY3Q8IZQ1 3526 aa15.49■□□□□ 0.07
CSNK1D-211ENST00000579316 C1QTNF9BB2RNN3 333 aa15.49■□□□□ 0.07
CSNK1D-211ENST00000579316 ADAMTS3O15072 1205 aa15.49■□□□□ 0.07
CSNK1D-211ENST00000579316 SGSM2O43147 1006 aa15.49■□□□□ 0.07
CSNK1D-211ENST00000579316 GAS7O60861 476 aa15.49■□□□□ 0.07
CSNK1D-211ENST00000579316 C1QTNF9P0C862 333 aa15.49■□□□□ 0.07
CSNK1D-211ENST00000579316 CHMLP26374 656 aa15.49■□□□□ 0.07
CSNK1D-211ENST00000579316 CXCL12P48061 93 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms