RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 CCDC94Q9BW85 323 aaPredicted RBP7.2□□□□□ -1.26
TRAF4-213ENST00000578917 TARS2Q9BW92 718 aaKnown RBP7.2□□□□□ -1.26
TRAF4-213ENST00000578917 COLEC11Q9BWP8 271 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 CCSER1Q9C0I3 900 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 LRRC27Q9C0I9 530 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 PDZD7Q9H5P4 517 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 TMEM134Q9H6X4 195 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 NRDE2Q9H7Z3 1164 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 UBE2ZQ9H832 354 aaPredicted RBP7.2□□□□□ -1.26
TRAF4-213ENST00000578917 PARVGQ9HBI0 331 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 NGRNQ9NPE2 291 aaKnown RBP7.2□□□□□ -1.26
TRAF4-213ENST00000578917 RNF19AQ9NV58 838 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 FAM13BQ9NYF5 915 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 DNAJB4Q9UDY4 337 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 STK17AQ9UEE5 414 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 ODF2LQ9ULJ1 636 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 FAM50BQ9Y247 325 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 LZTS1Q9Y250 596 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 PRG3Q9Y2Y8 225 aaPredicted RBP7.2□□□□□ -1.26
TRAF4-213ENST00000578917 ATP6V1DQ9Y5K8 247 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 UNC80Q8N2C7 3258 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 EYSQ5T1H1 3165 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 EVPLQ92817 2033 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 TTLL13PA6NNM8 815 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 CLDN3O15551 220 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 TRAK2O60296 914 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 CUTAO60888 179 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 YEATS4O95619 227 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 THP07101 528 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 GALTP07902 379 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 SCP2P22307 547 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 ABCD1P33897 745 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 IRS1P35568 1242 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 SLC11A1P49279 550 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 NASPP49321 788 aaPredicted RBP7.19□□□□□ -1.26
TRAF4-213ENST00000578917 LIG4P49917 911 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 KCNQ1P51787 676 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 AFF1P51825 1210 aaKnown RBP7.19□□□□□ -1.26
TRAF4-213ENST00000578917 AMPD3Q01432 767 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 HYAL1Q12794 435 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 SMC1AQ14683 1233 aaKnown RBP7.19□□□□□ -1.26
TRAF4-213ENST00000578917 CLUL1Q15846 466 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 ZNF568Q3ZCX4 644 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 NT5DC1Q5TFE4 455 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 EEF1DP3Q658K8 133 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 LLGL2Q6P1M3 1020 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 HAUS6Q7Z4H7 955 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 DDX53Q86TM3 631 aaKnown RBP7.19□□□□□ -1.26
TRAF4-213ENST00000578917 FAM178BQ8IXR5 827 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 DAW1Q8N136 415 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 IQUBQ8NA54 791 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 LINC00301Q8NCQ3 95 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 PABPC5Q96DU9 382 aaKnown RBP7.19□□□□□ -1.26
TRAF4-213ENST00000578917 IGSF21Q96ID5 467 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 ACAP3Q96P50 834 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 ACO2Q99798 780 aaKnown RBP7.19□□□□□ -1.26
TRAF4-213ENST00000578917 REEP2Q9BRK0 252 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 NTPCRQ9BSD7 190 aaKnown RBP7.19□□□□□ -1.26
TRAF4-213ENST00000578917 CCDC113Q9H0I3 377 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 TOPORSQ9NS56 1045 aaPredicted RBP7.19□□□□□ -1.26
TRAF4-213ENST00000578917 BLOC1S4Q9NUP1 217 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 SNTG2Q9NY99 539 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 ANKFY1Q9P2R3 1169 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 STK39Q9UEW8 545 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 TNFSF13BQ9Y275 285 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 PCDHGC5Q9Y5F6 944 aa7.19□□□□□ -1.26
TRAF4-213ENST00000578917 TTC3P53804 2025 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.18□□□□□ -1.26
TRAF4-213ENST00000578917 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.18□□□□□ -1.26
TRAF4-213ENST00000578917 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.18□□□□□ -1.26
TRAF4-213ENST00000578917 FSD2A1L4K1 749 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 K7ENM7 598 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 C2CD2LO14523 706 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 NRP1O14786 923 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 HNRNPDLO14979 420 aaKnown RBP7.18□□□□□ -1.26
TRAF4-213ENST00000578917 PPP6R2O75170 966 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 TOM1L1O75674 476 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 RECQL4O94761 1208 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 DDHD2O94830 711 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 MAPTP10636 758 aaKnown RBP7.18□□□□□ -1.26
TRAF4-213ENST00000578917 MCF2P10911 925 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 GTF2F1P35269 517 aaKnown RBP eCLIP7.18□□□□□ -1.26
TRAF4-213ENST00000578917 DNM1Q05193 864 aaKnown RBP7.18□□□□□ -1.26
TRAF4-213ENST00000578917 MAPK7Q13164 816 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 PKP1Q13835 747 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 CAMK1Q14012 370 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 GIT2Q14161 759 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 PUS10Q3MIT2 529 aaKnown RBP7.18□□□□□ -1.26
TRAF4-213ENST00000578917 HERC4Q5GLZ8 1057 aaPredicted RBP7.18□□□□□ -1.26
TRAF4-213ENST00000578917 PTCRAQ6ISU1 281 aaPredicted RBP7.18□□□□□ -1.26
TRAF4-213ENST00000578917 MPZL3Q6UWV2 235 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 SYCP3Q8IZU3 236 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 SLC39A11Q8N1S5 342 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 EFHBQ8N7U6 833 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 MRPL43Q8N983 215 aaKnown RBP7.18□□□□□ -1.26
TRAF4-213ENST00000578917 TMEM161BQ8NDZ6 487 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 ADAMTS19Q8TE59 1207 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 RABGGTAQ92696 567 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 DDX12PQ92771 950 aa7.18□□□□□ -1.26
TRAF4-213ENST00000578917 DHX58Q96C10 678 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms