RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 LPIN1Q14693 890 aa15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 MAN2A1Q16706 1144 aa15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 FAM187BQ17R55 369 aa15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 FKBP15Q5T1M5 1219 aa15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 LRRC55Q6ZSA7 311 aa15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 TSHZ1Q6ZSZ6 1077 aa15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 DEFB128Q7Z7B8 93 aa15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 XXYLT1Q8NBI6 393 aa15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 TMEM40Q8WWA1 233 aa15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 POMGNT1Q8WZA1 660 aa15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 TUBGCP2Q9BSJ2 902 aa15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 HSD3B7Q9H2F3 369 aa15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 IFT122Q9HBG6 1241 aa15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 ARMCX3Q9UH62 379 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 ZMYM2Q9UBW7 1377 aa15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 ADGRA3Q8IWK6 1321 aa15.19■□□□□ 0.02
CSNK1D-209ENST00000578904 PES1O00541 588 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-209ENST00000578904 ACKR2O00590 384 aa15.19■□□□□ 0.02
CSNK1D-209ENST00000578904 NBNO60934 754 aa15.19■□□□□ 0.02
CSNK1D-209ENST00000578904 RPS6KA5O75582 802 aa15.19■□□□□ 0.02
CSNK1D-209ENST00000578904 CSF2RAP15509 400 aa15.19■□□□□ 0.02
CSNK1D-209ENST00000578904 EIF4BP23588 611 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-209ENST00000578904 COPB1P53618 953 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-209ENST00000578904 PAK2Q13177 524 aa15.19■□□□□ 0.02
CSNK1D-209ENST00000578904 PPIGQ13427 754 aaKnown RBP eCLIP15.19■□□□□ 0.027e-8■■□□□ 11.5
CSNK1D-209ENST00000578904 PRPF4BQ13523 1007 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-209ENST00000578904 KRT31Q15323 416 aa15.19■□□□□ 0.02
CSNK1D-209ENST00000578904 KYAT1Q16773 422 aa15.19■□□□□ 0.02
CSNK1D-209ENST00000578904 HSP90AA4PQ58FG1 418 aa15.19■□□□□ 0.02
CSNK1D-209ENST00000578904 FAM228AQ86W67 206 aa15.19■□□□□ 0.02
CSNK1D-209ENST00000578904 USP38Q8NB14 1042 aa15.19■□□□□ 0.02
CSNK1D-209ENST00000578904 XPO4Q9C0E2 1151 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-209ENST00000578904 DMAC2Q9NW81 257 aa15.19■□□□□ 0.02
CSNK1D-209ENST00000578904 COLQQ9Y215 455 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-209ENST00000578904 NOC2LQ9Y3T9 749 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-209ENST00000578904 SQORQ9Y6N5 450 aa15.19■□□□□ 0.02
CSNK1D-209ENST00000578904 SCN5AQ14524 2016 aa15.18■□□□□ 0.02
CSNK1D-209ENST00000578904 A0A1B0GTH6 734 aa15.18■□□□□ 0.02
CSNK1D-209ENST00000578904 CLDN3O15551 220 aa15.18■□□□□ 0.02
CSNK1D-209ENST00000578904 CSDE1O75534 798 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-209ENST00000578904 TOM1L1O75674 476 aa15.18■□□□□ 0.02
CSNK1D-209ENST00000578904 FGFR4P22455 802 aa15.18■□□□□ 0.02
CSNK1D-209ENST00000578904 CD52P31358 61 aa15.18■□□□□ 0.02
CSNK1D-209ENST00000578904 CYP2J2P51589 502 aa15.18■□□□□ 0.02
CSNK1D-209ENST00000578904 MBTD1Q05BQ5 628 aa15.18■□□□□ 0.02
CSNK1D-209ENST00000578904 INTS8Q75QN2 995 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-209ENST00000578904 CATSPER4Q7RTX7 472 aa15.18■□□□□ 0.02
CSNK1D-209ENST00000578904 FAM186BQ8IYM0 893 aa15.18■□□□□ 0.02
CSNK1D-209ENST00000578904 ADPGKQ9BRR6 497 aa15.18■□□□□ 0.02
CSNK1D-209ENST00000578904 TCHPQ9BT92 498 aa15.18■□□□□ 0.02
CSNK1D-209ENST00000578904 IFIH1Q9BYX4 1025 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-209ENST00000578904 OSBPL7Q9BZF2 842 aa15.18■□□□□ 0.02
CSNK1D-209ENST00000578904 CCDC113Q9H0I3 377 aa15.18■□□□□ 0.02
CSNK1D-209ENST00000578904 FZD8Q9H461 694 aa15.18■□□□□ 0.02
CSNK1D-209ENST00000578904 AGO3Q9H9G7 860 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-209ENST00000578904 HSPBP1Q9NZL4 362 aa15.18■□□□□ 0.02
CSNK1D-209ENST00000578904 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.18■□□□□ 0.02
CSNK1D-209ENST00000578904 GPR182O15218 404 aa15.17■□□□□ 0.02
CSNK1D-209ENST00000578904 STX10O60499 249 aa15.17■□□□□ 0.02
CSNK1D-209ENST00000578904 CXCL10P02778 98 aa15.17■□□□□ 0.02
CSNK1D-209ENST00000578904 PTMAP06454 111 aaKnown RBP15.17■□□□□ 0.02
CSNK1D-209ENST00000578904 PFKMP08237 780 aa15.17■□□□□ 0.02
CSNK1D-209ENST00000578904 TPM1P09493 284 aa15.17■□□□□ 0.02
CSNK1D-209ENST00000578904 AXLP30530 894 aa15.17■□□□□ 0.02
CSNK1D-209ENST00000578904 DEKP35659 375 aaKnown RBP15.17■□□□□ 0.02
CSNK1D-209ENST00000578904 ENPEPQ07075 957 aa15.17■□□□□ 0.02
CSNK1D-209ENST00000578904 NFX1Q12986 1120 aaKnown RBP15.17■□□□□ 0.02
CSNK1D-209ENST00000578904 GPNMBQ14956 572 aa15.17■□□□□ 0.02
CSNK1D-209ENST00000578904 IRF2BP1Q8IU81 584 aa15.17■□□□□ 0.02
CSNK1D-209ENST00000578904 RPUSD2Q8IZ73 545 aaKnown RBP15.17■□□□□ 0.02
CSNK1D-209ENST00000578904 GPD1LQ8N335 351 aa15.17■□□□□ 0.02
CSNK1D-209ENST00000578904 SEPT8Q92599 483 aa15.17■□□□□ 0.02
CSNK1D-209ENST00000578904 VPS16Q9H269 839 aa15.17■□□□□ 0.02
CSNK1D-209ENST00000578904 MINDY3Q9H8M7 445 aa15.17■□□□□ 0.02
CSNK1D-209ENST00000578904 ERVK-5Q9HDB9 667 aa15.17■□□□□ 0.02
CSNK1D-209ENST00000578904 IL23AQ9NPF7 189 aa15.17■□□□□ 0.02
CSNK1D-209ENST00000578904 RTN4Q9NQC3 1192 aaKnown RBP15.17■□□□□ 0.02
CSNK1D-209ENST00000578904 PADI3Q9ULW8 664 aa15.17■□□□□ 0.02
CSNK1D-209ENST00000578904 STYXL1Q9Y6J8 313 aa15.17■□□□□ 0.02
CSNK1D-209ENST00000578904 ZNF233A6NK53 670 aa15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 LGALS16A8MUM7 142 aa15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 RBAK-RBAKDNI3L0D1 243 aa15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 ACRP10323 421 aa15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 MAGEA10P43363 369 aaPredicted RBP15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 UBXN1Q04323 297 aa15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 CETN1Q12798 172 aa15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 NR1I3Q14994 352 aa15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 VWA3BQ502W6 1294 aa15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 PLEKHG4Q58EX7 1191 aa15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 ATF7IP2Q5U623 682 aa15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 CNKSR3Q6P9H4 555 aa15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 TAS1R3Q7RTX0 852 aa15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 APBB2Q92870 758 aa15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 IQCDQ96DY2 449 aa15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 PPP1R9BQ96SB3 815 aa15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 ACO2Q99798 780 aaKnown RBP15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 MSTO1Q9BUK6 570 aa15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 TARS2Q9BW92 718 aaKnown RBP15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 PCIF1Q9H4Z3 704 aa15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 TAB2Q9NYJ8 693 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms