RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 GALTP07902 379 aa15.88■□□□□ 0.13
MKS1-207ENST00000578789 AKAP5P24588 427 aa15.88■□□□□ 0.13
MKS1-207ENST00000578789 SCNN1GP51170 649 aa15.88■□□□□ 0.13
MKS1-207ENST00000578789 KRT85P78386 507 aa15.88■□□□□ 0.13
MKS1-207ENST00000578789 RNASELQ05823 741 aaKnown RBP15.88■□□□□ 0.13
MKS1-207ENST00000578789 DSC1Q08554 894 aa15.88■□□□□ 0.13
MKS1-207ENST00000578789 STRN3Q13033 797 aa15.88■□□□□ 0.13
MKS1-207ENST00000578789 COL19A1Q14993 1142 aa15.88■□□□□ 0.13
MKS1-207ENST00000578789 TCEAL5Q5H9L2 206 aa15.88■□□□□ 0.13
MKS1-207ENST00000578789 APBB1IPQ7Z5R6 666 aaPredicted RBP15.88■□□□□ 0.13
MKS1-207ENST00000578789 ZNF280BQ86YH2 543 aa15.88■□□□□ 0.13
MKS1-207ENST00000578789 PDILTQ8N807 584 aa15.88■□□□□ 0.13
MKS1-207ENST00000578789 GSTCDQ8NEC7 633 aa15.88■□□□□ 0.13
MKS1-207ENST00000578789 DDX12PQ92771 950 aa15.88■□□□□ 0.13
MKS1-207ENST00000578789 ZFP42Q96MM3 310 aa15.88■□□□□ 0.13
MKS1-207ENST00000578789 TARS2Q9BW92 718 aaKnown RBP15.88■□□□□ 0.13
MKS1-207ENST00000578789 CUEDC2Q9H467 287 aa15.88■□□□□ 0.13
MKS1-207ENST00000578789 TLR9Q9NR96 1032 aa15.88■□□□□ 0.13
MKS1-207ENST00000578789 ATP6V1DQ9Y5K8 247 aa15.88■□□□□ 0.13
MKS1-207ENST00000578789 EYSQ5T1H1 3165 aa15.88■□□□□ 0.13
MKS1-207ENST00000578789 K7ENM7 598 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 TRAK2O60296 914 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 POMCP01189 267 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 IRS1P35568 1242 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 ME1P48163 572 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 SLC11A1P49279 550 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 ALDH7A1P49419 539 aaKnown RBP15.87■□□□□ 0.13
MKS1-207ENST00000578789 GRIK3Q13003 919 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 ZNF568Q3ZCX4 644 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 RESP18Q5W5W9 173 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 PDE12Q6L8Q7 609 aaKnown RBP15.87■□□□□ 0.13
MKS1-207ENST00000578789 MPZL3Q6UWV2 235 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 ZPBP2Q6X784 338 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 HAUS6Q7Z4H7 955 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 MYCT1Q8N699 235 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 SLC17A8Q8NDX2 589 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 DNAJC19Q96DA6 116 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 CDT1Q9H211 546 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 TNMDQ9H2S6 317 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 ST6GALNAC4Q9H4F1 302 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 MIOSQ9NXC5 875 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 SNTG2Q9NY99 539 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 DNAJB4Q9UDY4 337 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 PARP2Q9UGN5 583 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 COG5Q9UP83 839 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 MYO7AQ13402 2215 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 REV3LO60673 3130 aa15.87■□□□□ 0.13
MKS1-207ENST00000578789 FRMD3A2A2Y4 597 aa15.86■□□□□ 0.13
MKS1-207ENST00000578789 TOM1L1O75674 476 aa15.86■□□□□ 0.13
MKS1-207ENST00000578789 RECQL4O94761 1208 aa15.86■□□□□ 0.13
MKS1-207ENST00000578789 PIGRP01833 764 aa15.86■□□□□ 0.13
MKS1-207ENST00000578789 MCF2P10911 925 aa15.86■□□□□ 0.13
MKS1-207ENST00000578789 ABCD1P33897 745 aa15.86■□□□□ 0.13
MKS1-207ENST00000578789 GRM5P41594 1212 aa15.86■□□□□ 0.13
MKS1-207ENST00000578789 KRT17Q04695 432 aa15.86■□□□□ 0.13
MKS1-207ENST00000578789 SKIV2LQ15477 1246 aaKnown RBP15.86■□□□□ 0.13
MKS1-207ENST00000578789 DYMQ7RTS9 669 aa15.86■□□□□ 0.13
MKS1-207ENST00000578789 TMEM173Q86WV6 379 aaPredicted RBP15.86■□□□□ 0.13
MKS1-207ENST00000578789 FAM178BQ8IXR5 827 aa15.86■□□□□ 0.13
MKS1-207ENST00000578789 COLGALT2Q8IYK4 626 aa15.86■□□□□ 0.13
MKS1-207ENST00000578789 LEO1Q8WVC0 666 aaPredicted RBP15.86■□□□□ 0.13
MKS1-207ENST00000578789 IGSF21Q96ID5 467 aa15.86■□□□□ 0.13
MKS1-207ENST00000578789 FAM193BQ96PV7 902 aaPredicted RBP15.86■□□□□ 0.13
MKS1-207ENST00000578789 PANK2Q9BZ23 570 aa15.86■□□□□ 0.13
MKS1-207ENST00000578789 GBP3Q9H0R5 595 aa15.86■□□□□ 0.13
MKS1-207ENST00000578789 MAGEF1Q9HAY2 307 aa15.86■□□□□ 0.13
MKS1-207ENST00000578789 KBTBD4Q9NVX7 518 aa15.86■□□□□ 0.13
MKS1-207ENST00000578789 SEL1LQ9UBV2 794 aa15.86■□□□□ 0.13
MKS1-207ENST00000578789 PUF60Q9UHX1 559 aaKnown RBP15.86■□□□□ 0.13
MKS1-207ENST00000578789 CITO14578 2027 aa15.85■□□□□ 0.13
MKS1-207ENST00000578789 PDCD11Q14690 1871 aaKnown RBP15.85■□□□□ 0.13
MKS1-207ENST00000578789 NT5C1B-RDH14C9J2C7 533 aa15.85■□□□□ 0.13
MKS1-207ENST00000578789 PTGESO14684 152 aa15.85■□□□□ 0.13
MKS1-207ENST00000578789 GAP43P17677 238 aa15.85■□□□□ 0.13
MKS1-207ENST00000578789 NUCB2P80303 420 aa15.85■□□□□ 0.13
MKS1-207ENST00000578789 GTF2BQ00403 316 aa15.85■□□□□ 0.13
MKS1-207ENST00000578789 ADGRD2Q7Z7M1 963 aa15.85■□□□□ 0.13
MKS1-207ENST00000578789 SFR1Q86XK3 245 aa15.85■□□□□ 0.13
MKS1-207ENST00000578789 CEP120Q8N960 986 aa15.85■□□□□ 0.13
MKS1-207ENST00000578789 IQUBQ8NA54 791 aa15.85■□□□□ 0.13
MKS1-207ENST00000578789 BCL7CQ8WUZ0 217 aaPredicted RBP15.85■□□□□ 0.13
MKS1-207ENST00000578789 ATXN2LQ8WWM7 1075 aaKnown RBP15.85■□□□□ 0.13
MKS1-207ENST00000578789 PPP2R3CQ969Q6 453 aa15.85■□□□□ 0.13
MKS1-207ENST00000578789 DHX58Q96C10 678 aa15.85■□□□□ 0.13
MKS1-207ENST00000578789 TMEM169Q96HH4 297 aa15.85■□□□□ 0.13
MKS1-207ENST00000578789 CHAMP1Q96JM3 812 aa15.85■□□□□ 0.13
MKS1-207ENST00000578789 SPATA32Q96LK8 384 aa15.85■□□□□ 0.13
MKS1-207ENST00000578789 RPS6KC1Q96S38 1066 aa15.85■□□□□ 0.13
MKS1-207ENST00000578789 LRRC27Q9C0I9 530 aa15.85■□□□□ 0.13
MKS1-207ENST00000578789 ZHX3Q9H4I2 956 aa15.85■□□□□ 0.13
MKS1-207ENST00000578789 FAM13BQ9NYF5 915 aa15.85■□□□□ 0.13
MKS1-207ENST00000578789 KLK14Q9P0G3 267 aa15.85■□□□□ 0.13
MKS1-207ENST00000578789 TBX20Q9UMR3 447 aa15.85■□□□□ 0.13
MKS1-207ENST00000578789 TRIP11Q15643 1979 aa15.85■□□□□ 0.13
MKS1-207ENST00000578789 BRWD1Q9NSI6 2320 aa15.84■□□□□ 0.13
MKS1-207ENST00000578789 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.84■□□□□ 0.13
MKS1-207ENST00000578789 NCK2O43639 380 aa15.84■□□□□ 0.13
MKS1-207ENST00000578789 PPP1R37O75864 691 aa15.84■□□□□ 0.13
MKS1-207ENST00000578789 CSPG5O95196 566 aa15.84■□□□□ 0.13
MKS1-207ENST00000578789 NMT1P30419 496 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms