RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 METTL13Q8N6R0 699 aa8.81□□□□□ -1
COPS3-215ENST00000578317 TMEM161BQ8NDZ6 487 aa8.81□□□□□ -1
COPS3-215ENST00000578317 TMEM174Q8WUU8 243 aa8.81□□□□□ -1
COPS3-215ENST00000578317 SCFD1Q8WVM8 642 aa8.81□□□□□ -1
COPS3-215ENST00000578317 HVCN1Q96D96 273 aa8.81□□□□□ -1
COPS3-215ENST00000578317 MCOLN1Q9GZU1 580 aa8.81□□□□□ -1
COPS3-215ENST00000578317 POLR3FQ9H1D9 316 aaPredicted RBP8.81□□□□□ -1
COPS3-215ENST00000578317 ZHX3Q9H4I2 956 aa8.81□□□□□ -1
COPS3-215ENST00000578317 MRPL44Q9H9J2 332 aaKnown RBP8.81□□□□□ -1
COPS3-215ENST00000578317 POLD4Q9HCU8 107 aa8.81□□□□□ -1
COPS3-215ENST00000578317 SLC39A2Q9NP94 309 aa8.81□□□□□ -1
COPS3-215ENST00000578317 STARD7Q9NQZ5 370 aa8.81□□□□□ -1
COPS3-215ENST00000578317 ARHGAP28Q9P2N2 729 aa8.81□□□□□ -1
COPS3-215ENST00000578317 PHLPP2Q6ZVD8 1323 aa8.81□□□□□ -1
COPS3-215ENST00000578317 A0A0U1RQG5 324 aaPredicted RBP8.8□□□□□ -1
COPS3-215ENST00000578317 TMEM229AB2RXF0 380 aa8.8□□□□□ -1
COPS3-215ENST00000578317 TREHO43280 583 aa8.8□□□□□ -1
COPS3-215ENST00000578317 COL6A1P12109 1028 aa8.8□□□□□ -1
COPS3-215ENST00000578317 SOX10P56693 466 aa8.8□□□□□ -1
COPS3-215ENST00000578317 SNRPFP62306 86 aaKnown RBP8.8□□□□□ -1
COPS3-215ENST00000578317 LAMTOR4Q0VGL1 99 aa8.8□□□□□ -1
COPS3-215ENST00000578317 TFDP1Q14186 410 aa8.8□□□□□ -1
COPS3-215ENST00000578317 ISM2Q6H9L7 571 aa8.8□□□□□ -1
COPS3-215ENST00000578317 GDF6Q6KF10 455 aaPredicted RBP8.8□□□□□ -1
COPS3-215ENST00000578317 HAUS6Q7Z4H7 955 aa8.8□□□□□ -1
COPS3-215ENST00000578317 SERINC5Q86VE9 423 aa8.8□□□□□ -1
COPS3-215ENST00000578317 MYOCDQ8IZQ8 938 aa8.8□□□□□ -1
COPS3-215ENST00000578317 LRRC71Q8N4P6 559 aa8.8□□□□□ -1
COPS3-215ENST00000578317 ENOX1Q8TC92 643 aaKnown RBP8.8□□□□□ -1
COPS3-215ENST00000578317 GIPC2Q8TF65 315 aa8.8□□□□□ -1
COPS3-215ENST00000578317 BSNDQ8WZ55 320 aa8.8□□□□□ -1
COPS3-215ENST00000578317 HPS3Q969F9 1004 aa8.8□□□□□ -1
COPS3-215ENST00000578317 VTI1AQ96AJ9 217 aa8.8□□□□□ -1
COPS3-215ENST00000578317 MRRFQ96E11 262 aaKnown RBP8.8□□□□□ -1
COPS3-215ENST00000578317 MAP7D2Q96T17 732 aa8.8□□□□□ -1
COPS3-215ENST00000578317 TSPY26PQ9H489 355 aa8.8□□□□□ -1
COPS3-215ENST00000578317 TMEM206Q9H813 350 aa8.8□□□□□ -1
COPS3-215ENST00000578317 KMT5AQ9NQR1 393 aa8.8□□□□□ -1
COPS3-215ENST00000578317 GDAQ9Y2T3 454 aa8.8□□□□□ -1
COPS3-215ENST00000578317 UBE4BO95155 1302 aa8.8□□□□□ -1
COPS3-215ENST00000578317 PSMA7O14818 248 aa8.8□□□□□ -1
COPS3-215ENST00000578317 IKBKBO14920 756 aa8.8□□□□□ -1
COPS3-215ENST00000578317 CYP2C9P11712 490 aa8.8□□□□□ -1
COPS3-215ENST00000578317 MAPK1P28482 360 aa8.8□□□□□ -1
COPS3-215ENST00000578317 ZNF165P49910 485 aa8.8□□□□□ -1
COPS3-215ENST00000578317 CLCN3P51790 818 aa8.8□□□□□ -1
COPS3-215ENST00000578317 PTENP60484 403 aa8.8□□□□□ -1
COPS3-215ENST00000578317 ZNF200P98182 395 aaPredicted RBP8.8□□□□□ -1
COPS3-215ENST00000578317 DHX9Q08211 1270 aaKnown RBP8.8□□□□□ -1
COPS3-215ENST00000578317 CAPSQ13938 189 aa8.8□□□□□ -1
COPS3-215ENST00000578317 PCBP1Q15365 356 aaKnown RBP eCLIP8.8□□□□□ -1
COPS3-215ENST00000578317 KNOP1Q1ED39 458 aaKnown RBP8.8□□□□□ -1
COPS3-215ENST00000578317 ANO6Q4KMQ2 910 aa8.8□□□□□ -1
COPS3-215ENST00000578317 CDCA2Q69YH5 1023 aaPredicted RBP8.8□□□□□ -1
COPS3-215ENST00000578317 ZNF410Q86VK4 478 aa8.8□□□□□ -1
COPS3-215ENST00000578317 ASAP3Q8TDY4 903 aa8.8□□□□□ -1
COPS3-215ENST00000578317 CTAGE1Q96RT6 745 aa8.8□□□□□ -1
COPS3-215ENST00000578317 DNAJC25Q9H1X3 360 aa8.8□□□□□ -1
COPS3-215ENST00000578317 C2orf40Q9H1Z8 148 aa8.8□□□□□ -1
COPS3-215ENST00000578317 IFT122Q9HBG6 1241 aa8.8□□□□□ -1
COPS3-215ENST00000578317 TOR4AQ9NXH8 423 aa8.8□□□□□ -1
COPS3-215ENST00000578317 CGNQ9P2M7 1197 aaKnown RBP8.8□□□□□ -1
COPS3-215ENST00000578317 RWDD2AQ9UIY3 292 aa8.8□□□□□ -1
COPS3-215ENST00000578317 DCTN4Q9UJW0 460 aa8.8□□□□□ -1
COPS3-215ENST00000578317 DENND3A2RUS2 1198 aa8.79□□□□□ -1
COPS3-215ENST00000578317 CCDC169A6NNP5 214 aa8.79□□□□□ -1
COPS3-215ENST00000578317 K7ERI5 159 aa8.79□□□□□ -1
COPS3-215ENST00000578317 PDXKO00764 312 aa8.79□□□□□ -1
COPS3-215ENST00000578317 CAND2O75155 1236 aa8.79□□□□□ -1
COPS3-215ENST00000578317 GPR32O75388 356 aa8.79□□□□□ -1
COPS3-215ENST00000578317 GCNT3O95395 438 aa8.79□□□□□ -1
COPS3-215ENST00000578317 CCNE1P24864 410 aa8.79□□□□□ -1
COPS3-215ENST00000578317 NMT1P30419 496 aaKnown RBP8.79□□□□□ -1
COPS3-215ENST00000578317 HOXD13P35453 343 aa8.79□□□□□ -1
COPS3-215ENST00000578317 GPC3P51654 580 aa8.79□□□□□ -1
COPS3-215ENST00000578317 CASP5P51878 434 aa8.79□□□□□ -1
COPS3-215ENST00000578317 GDF10P55107 478 aa8.79□□□□□ -1
COPS3-215ENST00000578317 CHMP4BP1P59074 171 aa8.79□□□□□ -1
COPS3-215ENST00000578317 LRRC63Q05C16 580 aa8.79□□□□□ -1
COPS3-215ENST00000578317 MYBPC2Q14324 1141 aa8.79□□□□□ -1
COPS3-215ENST00000578317 IQCB1Q15051 598 aa8.79□□□□□ -1
COPS3-215ENST00000578317 PTGISQ16647 500 aa8.79□□□□□ -1
COPS3-215ENST00000578317 NFIL3Q16649 462 aa8.79□□□□□ -1
COPS3-215ENST00000578317 FAM187BQ17R55 369 aa8.79□□□□□ -1
COPS3-215ENST00000578317 FAM47CQ5HY64 1035 aa8.79□□□□□ -1
COPS3-215ENST00000578317 L1TD1Q5T7N2 865 aaKnown RBP8.79□□□□□ -1
COPS3-215ENST00000578317 CAPN12Q6ZSI9 719 aa8.79□□□□□ -1
COPS3-215ENST00000578317 FAM43BQ6ZT52 329 aaPredicted RBP8.79□□□□□ -1
COPS3-215ENST00000578317 ANKRD33Q7Z3H0 272 aa8.79□□□□□ -1
COPS3-215ENST00000578317 RSPH3Q86UC2 560 aa8.79□□□□□ -1
COPS3-215ENST00000578317 RHPN2Q8IUC4 686 aa8.79□□□□□ -1
COPS3-215ENST00000578317 MAP4K3Q8IVH8 894 aa8.79□□□□□ -1
COPS3-215ENST00000578317 SMYD4Q8IYR2 804 aaPredicted RBP8.79□□□□□ -1
COPS3-215ENST00000578317 RNF149Q8NC42 400 aa8.79□□□□□ -1
COPS3-215ENST00000578317 GLIS3Q8NEA6 775 aa8.79□□□□□ -1
COPS3-215ENST00000578317 DEPTORQ8TB45 409 aa8.79□□□□□ -1
COPS3-215ENST00000578317 GOLGA5Q8TBA6 731 aa8.79□□□□□ -1
COPS3-215ENST00000578317 ZBTB10Q96DT7 871 aa8.79□□□□□ -1
COPS3-215ENST00000578317 TOX2Q96NM4 488 aa8.79□□□□□ -1
COPS3-215ENST00000578317 FGFBP2Q9BYJ0 223 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms