RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.02□□□□□ -0.64
PTPRM-205ENST00000577827 PPIP5K2O43314 1243 aa11.02□□□□□ -0.65
PTPRM-205ENST00000577827 RPS6KA4O75676 772 aa11.02□□□□□ -0.65
PTPRM-205ENST00000577827 SCP2P22307 547 aa11.02□□□□□ -0.65
PTPRM-205ENST00000577827 STAT3P40763 770 aa11.02□□□□□ -0.65
PTPRM-205ENST00000577827 HIF1AQ16665 826 aa11.02□□□□□ -0.65
PTPRM-205ENST00000577827 RPS6KC1Q96S38 1066 aa11.02□□□□□ -0.65
PTPRM-205ENST00000577827 REEP2Q9BRK0 252 aa11.02□□□□□ -0.65
PTPRM-205ENST00000577827 UPF3AQ9H1J1 476 aaKnown RBP11.02□□□□□ -0.65
PTPRM-205ENST00000577827 GDF3Q9NR23 364 aa11.02□□□□□ -0.65
PTPRM-205ENST00000577827 PSMC3IPQ9P2W1 217 aaPredicted RBP11.02□□□□□ -0.65
PTPRM-205ENST00000577827 SUGT1Q9Y2Z0 365 aa11.02□□□□□ -0.65
PTPRM-205ENST00000577827 UBE2Q2LH0YL09 131 aa11.02□□□□□ -0.65
PTPRM-205ENST00000577827 SRGAP2BP0DMP2 458 aa11.02□□□□□ -0.65
PTPRM-205ENST00000577827 RPA1P27694 616 aa11.02□□□□□ -0.65
PTPRM-205ENST00000577827 CASP7P55210 303 aa11.02□□□□□ -0.65
PTPRM-205ENST00000577827 SWT1Q5T5J6 900 aaKnown RBP11.02□□□□□ -0.65
PTPRM-205ENST00000577827 LONP2Q86WA8 852 aa11.02□□□□□ -0.65
PTPRM-205ENST00000577827 CNOT7Q9UIV1 285 aaKnown RBP11.02□□□□□ -0.65
PTPRM-205ENST00000577827 TTC7AQ9ULT0 858 aaPredicted RBP11.02□□□□□ -0.65
PTPRM-205ENST00000577827 WDR64B1ANS9 1081 aa11.02□□□□□ -0.65
PTPRM-205ENST00000577827 K7ERI5 159 aa11.02□□□□□ -0.65
PTPRM-205ENST00000577827 SYF2O95926 243 aaKnown RBP11.02□□□□□ -0.65
PTPRM-205ENST00000577827 MX2P20592 715 aa11.02□□□□□ -0.65
PTPRM-205ENST00000577827 COILP38432 576 aaPredicted RBP11.02□□□□□ -0.65
PTPRM-205ENST00000577827 QARSP47897 775 aaKnown RBP11.02□□□□□ -0.65
PTPRM-205ENST00000577827 SNRPFP62306 86 aaKnown RBP11.02□□□□□ -0.65
PTPRM-205ENST00000577827 KRT76Q01546 638 aa11.02□□□□□ -0.65
PTPRM-205ENST00000577827 RAPH1Q70E73 1250 aa11.02□□□□□ -0.65
PTPRM-205ENST00000577827 CATSPER1Q8NEC5 780 aa11.02□□□□□ -0.65
PTPRM-205ENST00000577827 DIP2BQ9P265 1576 aa11.02□□□□□ -0.65
PTPRM-205ENST00000577827 SERPINB2P05120 415 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 CNGA1P29973 690 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 CCND2P30279 289 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 SFNP31947 248 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 PKN1Q16512 942 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 RCOR2Q8IZ40 523 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 MREGQ8N565 214 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 HAUS8Q9BT25 410 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 TLR10Q9BXR5 811 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 SEMA6BQ9H3T3 888 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 UBN1Q9NPG3 1134 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 PARVAQ9NVD7 372 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 TRIM33Q9UPN9 1127 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 MTO1Q9Y2Z2 717 aaKnown RBP11.01□□□□□ -0.65
PTPRM-205ENST00000577827 KPNA7A9QM74 516 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 CAPN9O14815 690 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 TRPA1O75762 1119 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 ACADSP16219 412 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 ARSEP51690 589 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 MRPS9P82933 396 aaKnown RBP11.01□□□□□ -0.65
PTPRM-205ENST00000577827 GRB10Q13322 594 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 BIRC2Q13490 618 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 DCAF15Q66K64 600 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 NUDCD3Q8IVD9 361 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 FLAD1Q8NFF5 587 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 MDM1Q8TC05 714 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 TTC1Q99614 292 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 DDX20Q9UHI6 824 aaKnown RBP11.01□□□□□ -0.65
PTPRM-205ENST00000577827 GGT7Q9UJ14 662 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 TCP10L2B9ZVM9 353 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 KIAA0391O15091 583 aaKnown RBP11.01□□□□□ -0.65
PTPRM-205ENST00000577827 COMTP21964 271 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 SATB1Q01826 763 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 CUL3Q13618 768 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 TEDDM1Q5T9Z0 273 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 FOXR1Q6PIV2 292 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 C16orf86Q6ZW13 317 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 ICA1LQ8NDH6 482 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 RIOK1Q9BRS2 568 aaKnown RBP11.01□□□□□ -0.65
PTPRM-205ENST00000577827 MSTO1Q9BUK6 570 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 GCOM2Q9BZD3 368 aaPredicted RBP11.01□□□□□ -0.65
PTPRM-205ENST00000577827 ASNSD1Q9NWL6 643 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 AIPL1Q9NZN9 384 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 IPO11Q9UI26 975 aaKnown RBP11.01□□□□□ -0.65
PTPRM-205ENST00000577827 TMEM131LA2VDJ0 1609 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 CLDN3O15551 220 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 ANP32DO95626 131 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 HSPA4LO95757 839 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 GSTA2P09210 222 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 HSPA8P11142 646 aaKnown RBP11.01□□□□□ -0.65
PTPRM-205ENST00000577827 RASA1P20936 1047 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 TFAMQ00059 246 aaKnown RBP11.01□□□□□ -0.65
PTPRM-205ENST00000577827 DAB2IPQ5VWQ8 1189 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 SLC13A5Q86YT5 568 aaPredicted RBP11.01□□□□□ -0.65
PTPRM-205ENST00000577827 NLGN1Q8N2Q7 840 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 MTMR8Q96EF0 704 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 TRIM56Q9BRZ2 755 aaKnown RBP11.01□□□□□ -0.65
PTPRM-205ENST00000577827 LXNQ9BS40 222 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 FAM217BQ9NTX9 383 aaPredicted RBP11.01□□□□□ -0.65
PTPRM-205ENST00000577827 SEPT10Q9P0V9 454 aa11.01□□□□□ -0.65
PTPRM-205ENST00000577827 CLTCQ00610 1675 aaKnown RBP11□□□□□ -0.65
PTPRM-205ENST00000577827 NMT1P30419 496 aaKnown RBP11□□□□□ -0.65
PTPRM-205ENST00000577827 VHLP40337 213 aa11□□□□□ -0.65
PTPRM-205ENST00000577827 TMEM270Q6UE05 265 aa11□□□□□ -0.65
PTPRM-205ENST00000577827 FBXO33Q7Z6M2 555 aa11□□□□□ -0.65
PTPRM-205ENST00000577827 NRBF2Q96F24 287 aa11□□□□□ -0.65
PTPRM-205ENST00000577827 ZSWIM1Q9BR11 485 aa11□□□□□ -0.65
PTPRM-205ENST00000577827 TSSK1BQ9BXA7 367 aa11□□□□□ -0.65
PTPRM-205ENST00000577827 GTF3C4Q9UKN8 822 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms