RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 APOL6Q9BWW8 343 aa21.23■□□□□ 0.99
SS18-208ENST00000577751 REV3LO60673 3130 aa21.23■□□□□ 0.99
SS18-208ENST00000577751 CARNS1A5YM72 827 aa21.22■□□□□ 0.99
SS18-208ENST00000577751 B4GALT3O60512 393 aa21.22■□□□□ 0.99
SS18-208ENST00000577751 TBCAO75347 108 aaKnown RBP21.22■□□□□ 0.99
SS18-208ENST00000577751 DDHD2O94830 711 aa21.22■□□□□ 0.99
SS18-208ENST00000577751 PPM1AP35813 382 aa21.22■□□□□ 0.99
SS18-208ENST00000577751 PBX3P40426 434 aa21.22■□□□□ 0.99
SS18-208ENST00000577751 MLH1P40692 756 aa21.22■□□□□ 0.99
SS18-208ENST00000577751 RNASELQ05823 741 aaKnown RBP21.22■□□□□ 0.99
SS18-208ENST00000577751 ADALQ6DHV7 355 aa21.22■□□□□ 0.99
SS18-208ENST00000577751 ZPBP2Q6X784 338 aa21.22■□□□□ 0.99
SS18-208ENST00000577751 THNSL1Q8IYQ7 743 aa21.22■□□□□ 0.99
SS18-208ENST00000577751 SLC39A11Q8N1S5 342 aa21.22■□□□□ 0.99
SS18-208ENST00000577751 ZFP42Q96MM3 310 aa21.22■□□□□ 0.99
SS18-208ENST00000577751 SCAND2PQ9GZW5 306 aaPredicted RBP21.22■□□□□ 0.99
SS18-208ENST00000577751 TNMDQ9H2S6 317 aa21.22■□□□□ 0.99
SS18-208ENST00000577751 FAM13BQ9NYF5 915 aa21.22■□□□□ 0.99
SS18-208ENST00000577751 LZTS1Q9Y250 596 aa21.22■□□□□ 0.99
SS18-208ENST00000577751 PRUNE2Q8WUY3 3088 aa21.21■□□□□ 0.99
SS18-208ENST00000577751 FRMD3A2A2Y4 597 aa21.21■□□□□ 0.99
SS18-208ENST00000577751 POMCP01189 267 aa21.21■□□□□ 0.99
SS18-208ENST00000577751 GALTP07902 379 aa21.21■□□□□ 0.99
SS18-208ENST00000577751 ALDH7A1P49419 539 aaKnown RBP21.21■□□□□ 0.99
SS18-208ENST00000577751 GTF2BQ00403 316 aa21.21■□□□□ 0.99
SS18-208ENST00000577751 TIGD5Q53EQ6 642 aa21.21■□□□□ 0.99
SS18-208ENST00000577751 APBB1IPQ7Z5R6 666 aaPredicted RBP21.21■□□□□ 0.99
SS18-208ENST00000577751 FAM178BQ8IXR5 827 aa21.21■□□□□ 0.99
SS18-208ENST00000577751 DHX58Q96C10 678 aa21.21■□□□□ 0.99
SS18-208ENST00000577751 CDT1Q9H211 546 aa21.21■□□□□ 0.99
SS18-208ENST00000577751 ST6GALNAC4Q9H4F1 302 aa21.21■□□□□ 0.99
SS18-208ENST00000577751 ZHX3Q9H4I2 956 aa21.21■□□□□ 0.99
SS18-208ENST00000577751 SNTG2Q9NY99 539 aa21.21■□□□□ 0.99
SS18-208ENST00000577751 SPG21Q9NZD8 308 aa21.21■□□□□ 0.99
SS18-208ENST00000577751 DNAJB4Q9UDY4 337 aa21.21■□□□□ 0.99
SS18-208ENST00000577751 PARP2Q9UGN5 583 aa21.21■□□□□ 0.99
SS18-208ENST00000577751 K7ENM7 598 aa21.2■□□□□ 0.98
SS18-208ENST00000577751 POLR2DO15514 142 aaKnown RBP21.2■□□□□ 0.98
SS18-208ENST00000577751 ZC3H11AO75152 810 aaKnown RBP eCLIP21.2■□□□□ 0.98
SS18-208ENST00000577751 TOM1L1O75674 476 aa21.2■□□□□ 0.98
SS18-208ENST00000577751 ABCD1P33897 745 aa21.2■□□□□ 0.98
SS18-208ENST00000577751 SCNN1GP51170 649 aa21.2■□□□□ 0.98
SS18-208ENST00000577751 DSC1Q08554 894 aa21.2■□□□□ 0.98
SS18-208ENST00000577751 MPZL3Q6UWV2 235 aa21.2■□□□□ 0.98
SS18-208ENST00000577751 SLC17A8Q8NDX2 589 aa21.2■□□□□ 0.98
SS18-208ENST00000577751 MRPS27Q92552 414 aaKnown RBP21.2■□□□□ 0.98
SS18-208ENST00000577751 TMEM175Q9BSA9 504 aa21.2■□□□□ 0.98
SS18-208ENST00000577751 NSUN3Q9H649 340 aaKnown RBP21.2■□□□□ 0.98
SS18-208ENST00000577751 SEL1LQ9UBV2 794 aa21.2■□□□□ 0.98
SS18-208ENST00000577751 TBX20Q9UMR3 447 aa21.2■□□□□ 0.98
SS18-208ENST00000577751 NT5C1B-RDH14C9J2C7 533 aa21.19■□□□□ 0.98
SS18-208ENST00000577751 RECQL4O94761 1208 aa21.19■□□□□ 0.98
SS18-208ENST00000577751 PIGRP01833 764 aa21.19■□□□□ 0.98
SS18-208ENST00000577751 MCF2P10911 925 aa21.19■□□□□ 0.98
SS18-208ENST00000577751 GAP43P17677 238 aa21.19■□□□□ 0.98
SS18-208ENST00000577751 CMA1P23946 247 aa21.19■□□□□ 0.98
SS18-208ENST00000577751 NMT1P30419 496 aaKnown RBP21.19■□□□□ 0.98
SS18-208ENST00000577751 IRS1P35568 1242 aa21.19■□□□□ 0.98
SS18-208ENST00000577751 KRT17Q04695 432 aa21.19■□□□□ 0.98
SS18-208ENST00000577751 ZNF568Q3ZCX4 644 aa21.19■□□□□ 0.98
SS18-208ENST00000577751 CNNM4Q6P4Q7 775 aa21.19■□□□□ 0.98
SS18-208ENST00000577751 ZNF720Q7Z2F6 126 aa21.19■□□□□ 0.98
SS18-208ENST00000577751 SFR1Q86XK3 245 aa21.19■□□□□ 0.98
SS18-208ENST00000577751 COLGALT2Q8IYK4 626 aa21.19■□□□□ 0.98
SS18-208ENST00000577751 STAMQ92783 540 aa21.19■□□□□ 0.98
SS18-208ENST00000577751 ZBTB45Q96K62 511 aaPredicted RBP21.19■□□□□ 0.98
SS18-208ENST00000577751 LRRC27Q9C0I9 530 aa21.19■□□□□ 0.98
SS18-208ENST00000577751 GBP3Q9H0R5 595 aa21.19■□□□□ 0.98
SS18-208ENST00000577751 PRDM6Q9NQX0 595 aa21.19■□□□□ 0.98
SS18-208ENST00000577751 KLK14Q9P0G3 267 aa21.19■□□□□ 0.98
SS18-208ENST00000577751 KCNH3Q9ULD8 1083 aa21.19■□□□□ 0.98
SS18-208ENST00000577751 MYO7AQ13402 2215 aa21.19■□□□□ 0.98
SS18-208ENST00000577751 PPP1R37O75864 691 aa21.18■□□□□ 0.98
SS18-208ENST00000577751 ALDH2P05091 517 aa21.18■□□□□ 0.98
SS18-208ENST00000577751 GRM5P41594 1212 aa21.18■□□□□ 0.98
SS18-208ENST00000577751 SLC11A1P49279 550 aa21.18■□□□□ 0.98
SS18-208ENST00000577751 TCEAL5Q5H9L2 206 aa21.18■□□□□ 0.98
SS18-208ENST00000577751 TMEM173Q86WV6 379 aaPredicted RBP21.18■□□□□ 0.98
SS18-208ENST00000577751 FAM193BQ96PV7 902 aaPredicted RBP21.18■□□□□ 0.98
SS18-208ENST00000577751 PYM1Q9BRP8 204 aaKnown RBP21.18■□□□□ 0.98
SS18-208ENST00000577751 STRA6Q9BX79 667 aa21.18■□□□□ 0.98
SS18-208ENST00000577751 TRIM9Q9C026 710 aa21.18■□□□□ 0.98
SS18-208ENST00000577751 MAGEF1Q9HAY2 307 aa21.18■□□□□ 0.98
SS18-208ENST00000577751 OLFML3Q9NRN5 406 aa21.18■□□□□ 0.98
SS18-208ENST00000577751 PUF60Q9UHX1 559 aaKnown RBP21.18■□□□□ 0.98
SS18-208ENST00000577751 TRIP11Q15643 1979 aa21.17■□□□□ 0.98
SS18-208ENST00000577751 FAM237AA0A1B0GTK4 181 aa21.17■□□□□ 0.98
SS18-208ENST00000577751 PTGESO14684 152 aa21.17■□□□□ 0.98
SS18-208ENST00000577751 FSCN2O14926 492 aa21.17■□□□□ 0.98
SS18-208ENST00000577751 ERVFC1P60507 584 aa21.17■□□□□ 0.98
SS18-208ENST00000577751 AMPD3Q01432 767 aa21.17■□□□□ 0.98
SS18-208ENST00000577751 MCL1Q07820 350 aa21.17■□□□□ 0.98
SS18-208ENST00000577751 GRIK3Q13003 919 aa21.17■□□□□ 0.98
SS18-208ENST00000577751 COL19A1Q14993 1142 aa21.17■□□□□ 0.98
SS18-208ENST00000577751 ZC2HC1CQ53FD0 456 aaPredicted RBP21.17■□□□□ 0.98
SS18-208ENST00000577751 PDE12Q6L8Q7 609 aaKnown RBP21.17■□□□□ 0.98
SS18-208ENST00000577751 MAP4K3Q8IVH8 894 aa21.17■□□□□ 0.98
SS18-208ENST00000577751 CEP120Q8N960 986 aa21.17■□□□□ 0.98
SS18-208ENST00000577751 IGSF21Q96ID5 467 aa21.17■□□□□ 0.98
SS18-208ENST00000577751 TCHPQ9BT92 498 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms