RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 NME8Q8N427 588 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 KREMEN2Q8NCW0 462 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 ATP8B4Q8TF62 1192 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 NOC3LQ8WTT2 800 aaKnown RBP11.18□□□□□ -0.62
SS18-207ENST00000577636 DHTKD1Q96HY7 919 aaPredicted RBP11.18□□□□□ -0.62
SS18-207ENST00000577636 CCDC43Q96MW1 224 aaKnown RBP11.18□□□□□ -0.62
SS18-207ENST00000577636 NACC1Q96RE7 527 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 MTRQ99707 1265 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 TCF25Q9BQ70 676 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 EIF2AK1Q9BQI3 630 aaKnown RBP11.18□□□□□ -0.62
SS18-207ENST00000577636 S1PR5Q9H228 398 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 ATP6V0A4Q9HBG4 840 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 ERVK-5Q9HDB9 667 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 BLOC1S4Q9NUP1 217 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 FANCLQ9NW38 375 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 CDH22Q9UJ99 828 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 VAV3Q9UKW4 847 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 ST3GAL5Q9UNP4 418 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 CTNND2Q9UQB3 1225 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 SAMM50Q9Y512 469 aa11.18□□□□□ -0.62
SS18-207ENST00000577636 SMIM35A0A1B0GVV1 85 aa11.17□□□□□ -0.62
SS18-207ENST00000577636 PPP1R3GB7ZBB8 358 aa11.17□□□□□ -0.62
SS18-207ENST00000577636 BACH1O14867 736 aa11.17□□□□□ -0.62
SS18-207ENST00000577636 DKC1O60832 514 aaKnown RBP eCLIP11.17□□□□□ -0.62
SS18-207ENST00000577636 MED24O75448 989 aa11.17□□□□□ -0.62
SS18-207ENST00000577636 TPM2P07951 284 aa11.17□□□□□ -0.62
SS18-207ENST00000577636 ARP10275 920 aa11.17□□□□□ -0.62
SS18-207ENST00000577636 SFNP31947 248 aa11.17□□□□□ -0.62
SS18-207ENST00000577636 JAK3P52333 1124 aa11.17□□□□□ -0.62
SS18-207ENST00000577636 UBASH3AP57075 661 aa11.17□□□□□ -0.62
SS18-207ENST00000577636 ACTR2P61160 394 aa11.17□□□□□ -0.62
SS18-207ENST00000577636 FANCCQ00597 558 aa11.17□□□□□ -0.62
SS18-207ENST00000577636 NCAPHQ15003 741 aa11.17□□□□□ -0.62
SS18-207ENST00000577636 PDE12Q6L8Q7 609 aaKnown RBP11.17□□□□□ -0.62
SS18-207ENST00000577636 SYCE2Q6PIF2 218 aa11.17□□□□□ -0.62
SS18-207ENST00000577636 SLC24A5Q71RS6 500 aa11.17□□□□□ -0.62
SS18-207ENST00000577636 ASCL5Q7RTU5 278 aa11.17□□□□□ -0.62
SS18-207ENST00000577636 TMC7Q7Z402 723 aa11.17□□□□□ -0.62
SS18-207ENST00000577636 TPH2Q8IWU9 490 aa11.17□□□□□ -0.62
SS18-207ENST00000577636 ADSSL1Q8N142 457 aa11.17□□□□□ -0.62
SS18-207ENST00000577636 SPC24Q8NBT2 197 aa11.17□□□□□ -0.62
SS18-207ENST00000577636 NELFBQ8WX92 580 aa11.17□□□□□ -0.62
SS18-207ENST00000577636 DDX12PQ92771 950 aa11.17□□□□□ -0.62
SS18-207ENST00000577636 AGO4Q9HCK5 861 aaKnown RBP11.17□□□□□ -0.62
SS18-207ENST00000577636 RGS18Q9NS28 235 aa11.17□□□□□ -0.62
SS18-207ENST00000577636 MAGEC2Q9UBF1 373 aaPredicted RBP11.17□□□□□ -0.62
SS18-207ENST00000577636 MYMKA6NI61 221 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 HIDE1A8MVS5 230 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 E9PMD0 336 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 GPR182O15218 404 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 GALR2O43603 387 aaPredicted RBP11.16□□□□□ -0.62
SS18-207ENST00000577636 TBCAO75347 108 aaKnown RBP11.16□□□□□ -0.62
SS18-207ENST00000577636 FGFR1OPO95684 399 aaKnown RBP11.16□□□□□ -0.62
SS18-207ENST00000577636 WEE2P0C1S8 567 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 LAG3P18627 525 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 PBX3P40426 434 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 STX17P56962 302 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 GSDMDP57764 484 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 CYP4A11Q02928 519 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 KIZQ2M2Z5 673 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 ODR4Q5SWX8 454 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 POTEGQ6S5H5 508 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 DYMQ7RTS9 669 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 PLPPR4Q7Z2D5 763 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 ZSCAN30Q86W11 494 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 FAM114A1Q8IWE2 563 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 SMYD4Q8IYR2 804 aaPredicted RBP11.16□□□□□ -0.62
SS18-207ENST00000577636 RNF169Q8NCN4 708 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 TMEM40Q8WWA1 233 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 OSMRQ99650 979 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 TSG101Q99816 390 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 SMOC2Q9H3U7 446 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 CWH43Q9H720 699 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 C1orf112Q9NSG2 853 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 PANK4Q9NVE7 773 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 IFNKQ9P0W0 207 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 IMPACTQ9P2X3 320 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 NR2E1Q9Y466 385 aa11.16□□□□□ -0.62
SS18-207ENST00000577636 TRIOO75962 3097 aa11.15□□□□□ -0.62
SS18-207ENST00000577636 ESPNB1AK53 854 aa11.15□□□□□ -0.62
SS18-207ENST00000577636 C2CD4DB7Z1M9 353 aa11.15□□□□□ -0.62
SS18-207ENST00000577636 C9IYK1 514 aa11.15□□□□□ -0.62
SS18-207ENST00000577636 FSCN2O14926 492 aa11.15□□□□□ -0.62
SS18-207ENST00000577636 AP5Z1O43299 807 aa11.15□□□□□ -0.62
SS18-207ENST00000577636 KLRC4O43908 158 aa11.15□□□□□ -0.62
SS18-207ENST00000577636 HBP1O60381 514 aa11.15□□□□□ -0.62
SS18-207ENST00000577636 P4HBP07237 508 aaKnown RBP11.15□□□□□ -0.62
SS18-207ENST00000577636 PRCPP42785 496 aa11.15□□□□□ -0.62
SS18-207ENST00000577636 KRT17Q04695 432 aa11.15□□□□□ -0.62
SS18-207ENST00000577636 COBLL1Q53SF7 1204 aa11.15□□□□□ -0.62
SS18-207ENST00000577636 CES5AQ6NT32 575 aa11.15□□□□□ -0.62
SS18-207ENST00000577636 KIAA0319LQ8IZA0 1049 aa11.15□□□□□ -0.62
SS18-207ENST00000577636 ABI1Q8IZP0 508 aa11.15□□□□□ -0.62
SS18-207ENST00000577636 METTL13Q8N6R0 699 aa11.15□□□□□ -0.62
SS18-207ENST00000577636 TMEM105Q8N8V8 129 aa11.15□□□□□ -0.62
SS18-207ENST00000577636 SYT2Q8N9I0 419 aaPredicted RBP11.15□□□□□ -0.62
SS18-207ENST00000577636 RDM1Q8NG50 284 aa11.15□□□□□ -0.62
SS18-207ENST00000577636 DYDC2Q96IM9 177 aa11.15□□□□□ -0.62
SS18-207ENST00000577636 HSD17B14Q9BPX1 270 aa11.15□□□□□ -0.62
SS18-207ENST00000577636 XPO4Q9C0E2 1151 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms