RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 ADPGKQ9BRR6 497 aa16.52■□□□□ 0.24
MKS1-205ENST00000577315 APOL6Q9BWW8 343 aa16.52■□□□□ 0.24
MKS1-205ENST00000577315 VN1R3Q9BXE9 311 aa16.52■□□□□ 0.24
MKS1-205ENST00000577315 SFXN1Q9H9B4 322 aa16.52■□□□□ 0.24
MKS1-205ENST00000577315 GPRC5CQ9NQ84 441 aa16.52■□□□□ 0.24
MKS1-205ENST00000577315 HES2Q9Y543 173 aa16.52■□□□□ 0.24
MKS1-205ENST00000577315 PLXNA3P51805 1871 aa16.52■□□□□ 0.23
MKS1-205ENST00000577315 TMEM221A6NGB7 291 aa16.51■□□□□ 0.23
MKS1-205ENST00000577315 SPDYE4A6NLX3 237 aa16.51■□□□□ 0.23
MKS1-205ENST00000577315 M0R296 226 aa16.51■□□□□ 0.23
MKS1-205ENST00000577315 B4GALT5O43286 388 aa16.51■□□□□ 0.23
MKS1-205ENST00000577315 LILRB3O75022 631 aa16.51■□□□□ 0.23
MKS1-205ENST00000577315 C1RP00736 705 aa16.51■□□□□ 0.23
MKS1-205ENST00000577315 ADH1AP07327 375 aa16.51■□□□□ 0.23
MKS1-205ENST00000577315 CCT6AP40227 531 aaKnown RBP16.51■□□□□ 0.23
MKS1-205ENST00000577315 PTPN21Q16825 1174 aa16.51■□□□□ 0.23
MKS1-205ENST00000577315 TMEM132AQ24JP5 1023 aa16.51■□□□□ 0.23
MKS1-205ENST00000577315 RARS2Q5T160 578 aaKnown RBP16.51■□□□□ 0.23
MKS1-205ENST00000577315 RNF168Q8IYW5 571 aaPredicted RBP16.51■□□□□ 0.23
MKS1-205ENST00000577315 PLCD3Q8N3E9 789 aa16.51■□□□□ 0.23
MKS1-205ENST00000577315 C4orf32Q8N8J7 132 aa16.51■□□□□ 0.23
MKS1-205ENST00000577315 IFT74Q96LB3 600 aa16.51■□□□□ 0.23
MKS1-205ENST00000577315 FBXL18Q96ME1 805 aa16.51■□□□□ 0.23
MKS1-205ENST00000577315 NXF3Q9H4D5 531 aaKnown RBP16.51■□□□□ 0.23
MKS1-205ENST00000577315 POMKQ9H5K3 350 aa16.51■□□□□ 0.23
MKS1-205ENST00000577315 MARCH5Q9NX47 278 aa16.51■□□□□ 0.23
MKS1-205ENST00000577315 PARP2Q9UGN5 583 aa16.51■□□□□ 0.23
MKS1-205ENST00000577315 USTQ9Y2C2 406 aa16.51■□□□□ 0.23
MKS1-205ENST00000577315 PRG3Q9Y2Y8 225 aaPredicted RBP16.51■□□□□ 0.23
MKS1-205ENST00000577315 CITO14578 2027 aa16.51■□□□□ 0.23
MKS1-205ENST00000577315 ACKR2O00590 384 aa16.5■□□□□ 0.23
MKS1-205ENST00000577315 SSBP05455 408 aaKnown RBP eCLIP16.5■□□□□ 0.23
MKS1-205ENST00000577315 CNPP09543 421 aaKnown RBP16.5■□□□□ 0.23
MKS1-205ENST00000577315 PRPHP41219 470 aa16.5■□□□□ 0.23
MKS1-205ENST00000577315 GLUD2P49448 558 aa16.5■□□□□ 0.23
MKS1-205ENST00000577315 CLCN4P51793 760 aa16.5■□□□□ 0.23
MKS1-205ENST00000577315 EFNA5P52803 228 aa16.5■□□□□ 0.23
MKS1-205ENST00000577315 PRPF4BQ13523 1007 aaKnown RBP16.5■□□□□ 0.23
MKS1-205ENST00000577315 APBB1IPQ7Z5R6 666 aaPredicted RBP16.5■□□□□ 0.23
MKS1-205ENST00000577315 ZBTB33Q86T24 672 aa16.5■□□□□ 0.23
MKS1-205ENST00000577315 IGSF22Q8N9C0 903 aa16.5■□□□□ 0.23
MKS1-205ENST00000577315 DEPTORQ8TB45 409 aa16.5■□□□□ 0.23
MKS1-205ENST00000577315 KIFAP3Q92845 792 aa16.5■□□□□ 0.23
MKS1-205ENST00000577315 PBXIP1Q96AQ6 731 aa16.5■□□□□ 0.23
MKS1-205ENST00000577315 ZFP42Q96MM3 310 aa16.5■□□□□ 0.23
MKS1-205ENST00000577315 PRRX2Q99811 253 aa16.5■□□□□ 0.23
MKS1-205ENST00000577315 UPF2Q9HAU5 1272 aaKnown RBP16.5■□□□□ 0.23
MKS1-205ENST00000577315 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.5■□□□□ 0.23
MKS1-205ENST00000577315 MIOSQ9NXC5 875 aa16.5■□□□□ 0.23
MKS1-205ENST00000577315 EFEMP2O95967 443 aa16.49■□□□□ 0.23
MKS1-205ENST00000577315 PRKCBP05771 671 aa16.49■□□□□ 0.23
MKS1-205ENST00000577315 AKAP5P24588 427 aa16.49■□□□□ 0.23
MKS1-205ENST00000577315 PTGDRQ13258 359 aa16.49■□□□□ 0.23
MKS1-205ENST00000577315 KRT79Q5XKE5 535 aa16.49■□□□□ 0.23
MKS1-205ENST00000577315 CYP26C1Q6V0L0 522 aa16.49■□□□□ 0.23
MKS1-205ENST00000577315 C15orf39Q6ZRI6 1047 aa16.49■□□□□ 0.23
MKS1-205ENST00000577315 GPR149Q86SP6 731 aa16.49■□□□□ 0.23
MKS1-205ENST00000577315 SUGP1Q8IWZ8 645 aaKnown RBP16.49■□□□□ 0.23
MKS1-205ENST00000577315 ZDHHC14Q8IZN3 488 aa16.49■□□□□ 0.23
MKS1-205ENST00000577315 GSTCDQ8NEC7 633 aa16.49■□□□□ 0.23
MKS1-205ENST00000577315 SNX29Q8TEQ0 813 aa16.49■□□□□ 0.23
MKS1-205ENST00000577315 BHMT2Q9H2M3 363 aa16.49■□□□□ 0.23
MKS1-205ENST00000577315 RXFP1Q9HBX9 757 aa16.49■□□□□ 0.23
MKS1-205ENST00000577315 TSHZ2Q9NRE2 1034 aa16.49■□□□□ 0.23
MKS1-205ENST00000577315 SORCS3Q9UPU3 1222 aa16.49■□□□□ 0.23
MKS1-205ENST00000577315 ZDBF2Q9HCK1 2354 aa16.49■□□□□ 0.23
MKS1-205ENST00000577315 PHLPP2Q6ZVD8 1323 aa16.48■□□□□ 0.23
MKS1-205ENST00000577315 MCM2P49736 904 aa16.48■□□□□ 0.23
MKS1-205ENST00000577315 DSG1Q02413 1049 aa16.48■□□□□ 0.23
MKS1-205ENST00000577315 CREMQ03060 361 aa16.48■□□□□ 0.23
MKS1-205ENST00000577315 TUSC3Q13454 348 aa16.48■□□□□ 0.23
MKS1-205ENST00000577315 USP41Q3LFD5 358 aa16.48■□□□□ 0.23
MKS1-205ENST00000577315 DCAF4L1Q3SXM0 396 aa16.48■□□□□ 0.23
MKS1-205ENST00000577315 RILPL1Q5EBL4 403 aa16.48■□□□□ 0.23
MKS1-205ENST00000577315 KIAA0319Q5VV43 1072 aa16.48■□□□□ 0.23
MKS1-205ENST00000577315 FUT10Q6P4F1 479 aa16.48■□□□□ 0.23
MKS1-205ENST00000577315 DTHD1Q6ZMT9 781 aa16.48■□□□□ 0.23
MKS1-205ENST00000577315 CDR2LQ86X02 465 aaPredicted RBP16.48■□□□□ 0.23
MKS1-205ENST00000577315 UBALD2Q8IYN6 164 aa16.48■□□□□ 0.23
MKS1-205ENST00000577315 KCTD17Q8N5Z5 321 aa16.48■□□□□ 0.23
MKS1-205ENST00000577315 C12orf76Q8N812 135 aaPredicted RBP16.48■□□□□ 0.23
MKS1-205ENST00000577315 TDRD5Q8NAT2 981 aaKnown RBP16.48■□□□□ 0.23
MKS1-205ENST00000577315 CMASQ8NFW8 434 aaPredicted RBP16.48■□□□□ 0.23
MKS1-205ENST00000577315 HDAC7Q8WUI4 952 aa16.48■□□□□ 0.23
MKS1-205ENST00000577315 ACSF2Q96CM8 615 aaPredicted RBP16.48■□□□□ 0.23
MKS1-205ENST00000577315 RHOBTB2Q9BYZ6 727 aa16.48■□□□□ 0.23
MKS1-205ENST00000577315 PDZD7Q9H5P4 517 aa16.48■□□□□ 0.23
MKS1-205ENST00000577315 DDX19AQ9NUU7 478 aaKnown RBP16.48■□□□□ 0.23
MKS1-205ENST00000577315 ADAM28Q9UKQ2 775 aa16.48■□□□□ 0.23
MKS1-205ENST00000577315 KIAA1024Q9UPX6 916 aa16.48■□□□□ 0.23
MKS1-205ENST00000577315 DNM3Q9UQ16 869 aa16.48■□□□□ 0.23
MKS1-205ENST00000577315 TRIOO75962 3097 aa16.48■□□□□ 0.23
MKS1-205ENST00000577315 C2CD4DB7Z1M9 353 aa16.47■□□□□ 0.23
MKS1-205ENST00000577315 C2CD2LO14523 706 aa16.47■□□□□ 0.23
MKS1-205ENST00000577315 GLUD1P00367 558 aa16.47■□□□□ 0.23
MKS1-205ENST00000577315 HOXD11P31277 338 aaPredicted RBP16.47■□□□□ 0.23
MKS1-205ENST00000577315 TOB1P50616 345 aaPredicted RBP16.47■□□□□ 0.23
MKS1-205ENST00000577315 MTMR3Q13615 1198 aa16.47■□□□□ 0.23
MKS1-205ENST00000577315 TMC5Q6UXY8 1006 aa16.47■□□□□ 0.23
MKS1-205ENST00000577315 FBXL6Q8N531 539 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms