RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 ASTLQ6HA08 431 aaPredicted RBP13.38□□□□□ -0.27
PRPF8-215ENST00000576958 CCDC149Q6ZUS6 474 aa13.38□□□□□ -0.27
PRPF8-215ENST00000576958 TMEM130Q8N3G9 435 aa13.38□□□□□ -0.27
PRPF8-215ENST00000576958 GTF3C6Q969F1 213 aa13.38□□□□□ -0.27
PRPF8-215ENST00000576958 MTMR9Q96QG7 549 aa13.38□□□□□ -0.27
PRPF8-215ENST00000576958 JPH2Q9BR39 696 aaPredicted RBP13.38□□□□□ -0.27
PRPF8-215ENST00000576958 TMEM175Q9BSA9 504 aa13.38□□□□□ -0.27
PRPF8-215ENST00000576958 RPP25Q9BUL9 199 aaKnown RBP13.38□□□□□ -0.27
PRPF8-215ENST00000576958 EMILIN2Q9BXX0 1053 aa13.38□□□□□ -0.27
PRPF8-215ENST00000576958 TTC12Q9H892 705 aaPredicted RBP13.38□□□□□ -0.27
PRPF8-215ENST00000576958 CNTNAP2Q9UHC6 1331 aa13.38□□□□□ -0.27
PRPF8-215ENST00000576958 KRBA1A5PL33 1030 aa13.37□□□□□ -0.27
PRPF8-215ENST00000576958 CASTOR2A6NHX0 329 aa13.37□□□□□ -0.27
PRPF8-215ENST00000576958 TGM5O43548 720 aa13.37□□□□□ -0.27
PRPF8-215ENST00000576958 CDKL5O76039 1030 aa13.37□□□□□ -0.27
PRPF8-215ENST00000576958 URODP06132 367 aa13.37□□□□□ -0.27
PRPF8-215ENST00000576958 NBR1Q14596 966 aa13.37□□□□□ -0.27
PRPF8-215ENST00000576958 RTP2Q5QGT7 225 aa13.37□□□□□ -0.27
PRPF8-215ENST00000576958 NOTUMQ6P988 496 aa13.37□□□□□ -0.27
PRPF8-215ENST00000576958 OTUD6AQ7L8S5 288 aa13.37□□□□□ -0.27
PRPF8-215ENST00000576958 DIS3L2Q8IYB7 885 aaKnown RBP13.37□□□□□ -0.27
PRPF8-215ENST00000576958 SIX5Q8N196 739 aa13.37□□□□□ -0.27
PRPF8-215ENST00000576958 TCP11Q8WWU5 503 aa13.37□□□□□ -0.27
PRPF8-215ENST00000576958 KIFC3Q9BVG8 833 aa13.37□□□□□ -0.27
PRPF8-215ENST00000576958 PARP2Q9UGN5 583 aa13.37□□□□□ -0.27
PRPF8-215ENST00000576958 VWA8A3KMH1 1905 aa13.37□□□□□ -0.27
PRPF8-215ENST00000576958 FRYLO94915 3013 aa13.37□□□□□ -0.27
PRPF8-215ENST00000576958 RIF1Q5UIP0 2472 aaKnown RBP13.36□□□□□ -0.27
PRPF8-215ENST00000576958 PTGESO14684 152 aa13.36□□□□□ -0.27
PRPF8-215ENST00000576958 LIG1P18858 919 aa13.36□□□□□ -0.27
PRPF8-215ENST00000576958 GBP2P32456 591 aaPredicted RBP13.36□□□□□ -0.27
PRPF8-215ENST00000576958 DSG1Q02413 1049 aa13.36□□□□□ -0.27
PRPF8-215ENST00000576958 TDGQ13569 410 aa13.36□□□□□ -0.27
PRPF8-215ENST00000576958 GIT2Q14161 759 aa13.36□□□□□ -0.27
PRPF8-215ENST00000576958 BMS1Q14692 1282 aaKnown RBP13.36□□□□□ -0.27
PRPF8-215ENST00000576958 ECM1Q16610 540 aa13.36□□□□□ -0.27
PRPF8-215ENST00000576958 EEF1DP3Q658K8 133 aa13.36□□□□□ -0.27
PRPF8-215ENST00000576958 FUT10Q6P4F1 479 aa13.36□□□□□ -0.27
PRPF8-215ENST00000576958 IFNLR1Q8IU57 520 aaPredicted RBP13.36□□□□□ -0.27
PRPF8-215ENST00000576958 RIN2Q8WYP3 895 aaPredicted RBP13.36□□□□□ -0.27
PRPF8-215ENST00000576958 SMG7Q92540 1137 aaKnown RBP13.36□□□□□ -0.27
PRPF8-215ENST00000576958 MFSD1Q9H3U5 465 aa13.36□□□□□ -0.27
PRPF8-215ENST00000576958 RXFP1Q9HBX9 757 aa13.36□□□□□ -0.27
PRPF8-215ENST00000576958 CHST7Q9NS84 486 aa13.36□□□□□ -0.27
PRPF8-215ENST00000576958 CA14Q9ULX7 337 aa13.36□□□□□ -0.27
PRPF8-215ENST00000576958 PCDHA12Q9UN75 941 aa13.36□□□□□ -0.27
PRPF8-215ENST00000576958 USTQ9Y2C2 406 aa13.36□□□□□ -0.27
PRPF8-215ENST00000576958 CLUHO75153 1309 aa13.36□□□□□ -0.27
PRPF8-215ENST00000576958 PRR23AA6NEV1 266 aa13.35□□□□□ -0.27
PRPF8-215ENST00000576958 LRRIQ4A6NIV6 560 aa13.35□□□□□ -0.27
PRPF8-215ENST00000576958 EPB41L2O43491 1005 aaKnown RBP13.35□□□□□ -0.27
PRPF8-215ENST00000576958 NEMFO60524 1076 aa13.35□□□□□ -0.27
PRPF8-215ENST00000576958 LRRN2O75325 713 aa13.35□□□□□ -0.27
PRPF8-215ENST00000576958 KIF4AO95239 1232 aa13.35□□□□□ -0.27
PRPF8-215ENST00000576958 LYPLA2O95372 231 aa13.35□□□□□ -0.27
PRPF8-215ENST00000576958 GLUD1P00367 558 aa13.35□□□□□ -0.27
PRPF8-215ENST00000576958 MCM7P33993 719 aa13.35□□□□□ -0.27
PRPF8-215ENST00000576958 POTEHQ6S545 545 aa13.35□□□□□ -0.27
PRPF8-215ENST00000576958 GET4Q7L5D6 327 aaPredicted RBP13.35□□□□□ -0.27
PRPF8-215ENST00000576958 OTOP3Q7RTS5 596 aa13.35□□□□□ -0.27
PRPF8-215ENST00000576958 PPFIBP1Q86W92 1011 aa13.35□□□□□ -0.27
PRPF8-215ENST00000576958 CATSPER3Q86XQ3 398 aa13.35□□□□□ -0.27
PRPF8-215ENST00000576958 NOSTRINQ8IVI9 506 aa13.35□□□□□ -0.27
PRPF8-215ENST00000576958 SLFN12Q8IYM2 578 aa13.35□□□□□ -0.27
PRPF8-215ENST00000576958 FAM177A1Q8N128 213 aaPredicted RBP13.35□□□□□ -0.27
PRPF8-215ENST00000576958 PDZD7Q9H5P4 517 aa13.35□□□□□ -0.27
PRPF8-215ENST00000576958 WDR6Q9NNW5 1121 aaKnown RBP13.35□□□□□ -0.27
PRPF8-215ENST00000576958 SNTG2Q9NY99 539 aa13.35□□□□□ -0.27
PRPF8-215ENST00000576958 KANSL3Q9P2N6 904 aa13.35□□□□□ -0.27
PRPF8-215ENST00000576958 DUSP12Q9UNI6 340 aa13.35□□□□□ -0.27
PRPF8-215ENST00000576958 DMXL1Q9Y485 3027 aa13.35□□□□□ -0.27
PRPF8-215ENST00000576958 PTPRZ1P23471 2315 aaPredicted RBP13.35□□□□□ -0.27
PRPF8-215ENST00000576958 MTCL1Q9Y4B5 1905 aaKnown RBP13.35□□□□□ -0.27
PRPF8-215ENST00000576958 A0A1B0GUA9 196 aa13.34□□□□□ -0.27
PRPF8-215ENST00000576958 ASAP2O43150 1006 aa13.34□□□□□ -0.27
PRPF8-215ENST00000576958 ST18O60284 1047 aa13.34□□□□□ -0.27
PRPF8-215ENST00000576958 DKC1O60832 514 aaKnown RBP eCLIP13.34□□□□□ -0.27
PRPF8-215ENST00000576958 DGAT1O75907 488 aa13.34□□□□□ -0.27
PRPF8-215ENST00000576958 BAG4O95429 457 aaKnown RBP13.34□□□□□ -0.27
PRPF8-215ENST00000576958 ADH1AP07327 375 aa13.34□□□□□ -0.27
PRPF8-215ENST00000576958 MXD4Q14582 209 aaPredicted RBP13.34□□□□□ -0.27
PRPF8-215ENST00000576958 ZNF174Q15697 407 aa13.34□□□□□ -0.27
PRPF8-215ENST00000576958 NAB2Q15742 525 aa13.34□□□□□ -0.27
PRPF8-215ENST00000576958 GLRA4Q5JXX5 417 aa13.34□□□□□ -0.27
PRPF8-215ENST00000576958 SLC27A1Q6PCB7 646 aa13.34□□□□□ -0.27
PRPF8-215ENST00000576958 LILRA6Q6PI73 481 aa13.34□□□□□ -0.27
PRPF8-215ENST00000576958 RSPO2Q6UXX9 243 aaPredicted RBP13.34□□□□□ -0.27
PRPF8-215ENST00000576958 C15orf39Q6ZRI6 1047 aa13.34□□□□□ -0.27
PRPF8-215ENST00000576958 PLCD3Q8N3E9 789 aa13.34□□□□□ -0.27
PRPF8-215ENST00000576958 PRRX2Q99811 253 aa13.34□□□□□ -0.27
PRPF8-215ENST00000576958 TRIM6Q9C030 488 aaPredicted RBP13.34□□□□□ -0.27
PRPF8-215ENST00000576958 NT5C3AQ9H0P0 336 aa13.34□□□□□ -0.27
PRPF8-215ENST00000576958 ANKEF1Q9NU02 776 aa13.34□□□□□ -0.27
PRPF8-215ENST00000576958 ADAM28Q9UKQ2 775 aa13.34□□□□□ -0.27
PRPF8-215ENST00000576958 FBXL21Q9UKT6 434 aa13.34□□□□□ -0.27
PRPF8-215ENST00000576958 PPME1Q9Y570 386 aa13.34□□□□□ -0.27
PRPF8-215ENST00000576958 GVINP1Q7Z2Y8 2422 aa13.33□□□□□ -0.27
PRPF8-215ENST00000576958 TRIP11Q15643 1979 aa13.33□□□□□ -0.28
PRPF8-215ENST00000576958 I3L4J1 428 aa13.33□□□□□ -0.28
PRPF8-215ENST00000576958 NRG2O14511 850 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms