RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 CCPG1Q9ULG6 757 aa13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 ENO1P06733 434 aaKnown RBP13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 UBTFL6P0CB48 400 aaPredicted RBP13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 ITGA4P13612 1032 aa13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 ITGA8P53708 1063 aa13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 ZBTB17Q13105 803 aa13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 TMC3Q7Z5M5 1100 aa13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 DEPDC1BQ8WUY9 529 aa13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 RNF34Q969K3 372 aa13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 CEP170P1Q96L14 293 aa13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 CCDC195A0A1B0GUA6 201 aa13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 TLR3O15455 904 aaKnown RBP13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 PJA2O43164 708 aa13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 FXR2P51116 673 aaKnown RBP eCLIP13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 KCNMA1Q12791 1236 aa13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 SEC23AQ15436 765 aa13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 WDR59Q6PJI9 974 aa13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 ADGRF4Q8IZF3 695 aa13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 SMYD2Q9NRG4 433 aa13.94□□□□□ -0.18
PCDHGB3-201ENST00000576222 TTC4O95801 387 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 CD58P19256 250 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 PAPOLAP51003 745 aaKnown RBP13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 ITGB3BPQ13352 177 aaPredicted RBP13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 HIC1Q14526 733 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 LRRC36Q1X8D7 754 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 PADI6Q6TGC4 694 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 RAPH1Q70E73 1250 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 RCCD1A6NED2 376 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 WDR64B1ANS9 1081 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 ZBED1O96006 694 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 TNFRSF8P28908 595 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 ECE1P42892 770 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 GRB10Q13322 594 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 HIF1AQ16665 826 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 DOK7Q18PE1 504 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 P3H1Q32P28 736 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 KRT39Q6A163 491 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 GJB7Q6PEY0 223 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 ERICH1Q86X53 443 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 CELF1Q92879 486 aaKnown RBP13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 C18orf8Q96DM3 657 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 REEP2Q9BRK0 252 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 FAM96AQ9H5X1 160 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 PDP2Q9P2J9 529 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 CHD1O14646 1710 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 A6NJR5 290 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 GDF11O95390 407 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 EYA4O95677 639 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 PSMA2P25787 234 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 MAGEA4P43358 317 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 FSCBQ5H9T9 825 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 ANKMY2Q8IV38 441 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 LRRC43Q8N309 656 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 ATP6V0A1Q93050 837 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 TATDN2Q93075 761 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 PFDN4Q9NQP4 134 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 NEU2Q9Y3R4 380 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 DDR1Q08345 913 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 SLC13A5Q86YT5 568 aaPredicted RBP13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 RIBC1Q8N443 379 aaPredicted RBP13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 MTBPQ96DY7 904 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 SLC13A1Q9BZW2 595 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 SEMA4AQ9H3S1 761 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 DCLRE1BQ9H816 532 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 RXFP1Q9HBX9 757 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 BCS1LQ9Y276 419 aa13.93□□□□□ -0.18
PCDHGB3-201ENST00000576222 MAGEA13PA6NCF6 341 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 B2RBV5 119 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 MYBP10242 640 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 CYP19A1P11511 503 aaPredicted RBP13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 SLC1A1P43005 524 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 PRELPP51888 382 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 RCN1Q15293 331 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 QRICH1Q2TAL8 776 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 ZBTB8OSQ8IWT0 167 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 ANKRD27Q96NW4 1050 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 EIF2AK1Q9BQI3 630 aaKnown RBP13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 FOXP3Q9BZS1 431 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 PHTF1Q9UMS5 762 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 YARSP54577 528 aaKnown RBP13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 NBPF20Q3BBV1 942 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 DAB2IPQ5VWQ8 1189 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 ZNF662Q6ZS27 426 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 ZNF571Q7Z3V5 609 aaPredicted RBP13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 MREGQ8N565 214 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 NSL1Q96IY1 281 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 HIC2Q96JB3 615 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 SLAIN2Q9P270 581 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 PSMC3IPQ9P2W1 217 aaPredicted RBP13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 HESX1Q9UBX0 185 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 NOP56O00567 594 aaKnown RBP13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 HSPA4LO95757 839 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 PBX1P40424 430 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 FNTAP49354 379 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 DNAL1Q4LDG9 190 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 LVRNQ6Q4G3 990 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 DAGLBQ8NCG7 672 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 ZNF507Q8TCN5 953 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 ALKBH8Q96BT7 664 aaKnown RBP13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 MAGEB18Q96M61 343 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms