RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 PIGRP01833 764 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 SKIP12755 728 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 BMP1P13497 986 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 AKAP5P24588 427 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 UBA7P41226 1012 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 CASP5P51878 434 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 EFNA5P52803 228 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 UBE3AQ05086 875 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 EHHADHQ08426 723 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 PRPF4BQ13523 1007 aaKnown RBP9.56□□□□□ -0.88
SMG6-216ENST00000575176 PPP2R5AQ15172 486 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 ZRSR1Q15695 479 aaKnown RBP9.56□□□□□ -0.88
SMG6-216ENST00000575176 MAPK6Q16659 721 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 GLB1LQ6UWU2 654 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 ALKAL1Q6UXT8 129 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 ZBTB8OSQ8IWT0 167 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 TMEM130Q8N3G9 435 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 PPM1EQ8WY54 764 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 MRPS27Q92552 414 aaKnown RBP9.56□□□□□ -0.88
SMG6-216ENST00000575176 IGSF21Q96ID5 467 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 ZBTB45Q96K62 511 aaPredicted RBP9.56□□□□□ -0.88
SMG6-216ENST00000575176 MSLNLQ96KJ4 702 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 ZNF558Q96NG5 402 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 PAAF1Q9BRP4 392 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 TARS2Q9BW92 718 aaKnown RBP9.56□□□□□ -0.88
SMG6-216ENST00000575176 COL25A1Q9BXS0 654 aaPredicted RBP9.56□□□□□ -0.88
SMG6-216ENST00000575176 UBE2ZQ9H832 354 aaPredicted RBP9.56□□□□□ -0.88
SMG6-216ENST00000575176 CLEC1BQ9P126 229 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 TFIP11Q9UBB9 837 aaKnown RBP9.56□□□□□ -0.88
SMG6-216ENST00000575176 STK17AQ9UEE5 414 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 TNFSF13BQ9Y275 285 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 FAM237AA0A1B0GTK4 181 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 TISP43B9A030 160 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 N4BP3O15049 544 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 LILRB3O75022 631 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 ZC3H11AO75152 810 aaKnown RBP eCLIP9.55□□□□□ -0.88
SMG6-216ENST00000575176 POMCP01189 267 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 SOX4Q06945 474 aaPredicted RBP9.55□□□□□ -0.88
SMG6-216ENST00000575176 DMP1Q13316 513 aaPredicted RBP9.55□□□□□ -0.88
SMG6-216ENST00000575176 ZBTB41Q5SVQ8 909 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 ATF7IP2Q5U623 682 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 RESP18Q5W5W9 173 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 CNNM4Q6P4Q7 775 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 MAP4K3Q8IVH8 894 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 C3orf58Q8NDZ4 430 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 CNNM3Q8NE01 707 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 GLIS3Q8NEA6 775 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.55□□□□□ -0.88
SMG6-216ENST00000575176 DEPTORQ8TB45 409 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 PABPC5Q96DU9 382 aaKnown RBP9.55□□□□□ -0.88
SMG6-216ENST00000575176 ZMAT2Q96NC0 199 aaKnown RBP9.55□□□□□ -0.88
SMG6-216ENST00000575176 ASB2Q96Q27 587 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 PPP1R10Q96QC0 940 aaKnown RBP9.55□□□□□ -0.88
SMG6-216ENST00000575176 ST6GALNAC4Q9H4F1 302 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 TLR9Q9NR96 1032 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 KBTBD4Q9NVX7 518 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 RNF216Q9NWF9 866 aaPredicted RBP9.55□□□□□ -0.88
SMG6-216ENST00000575176 SNTG2Q9NY99 539 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 RCOR1Q9UKL0 485 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 PCDHA7Q9UN72 937 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 HPSEQ9Y251 543 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 INPP5FQ9Y2H2 1132 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 GIT1Q9Y2X7 761 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 IRAK3Q9Y616 596 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 WDFY4Q6ZS81 3184 aa9.55□□□□□ -0.88
SMG6-216ENST00000575176 OBSL1O75147 1896 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 C2orf71A6NGG8 1288 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 CSPG5O95196 566 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 ITGA4P13612 1032 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 NMT1P30419 496 aaKnown RBP9.54□□□□□ -0.88
SMG6-216ENST00000575176 HOXD13P35453 343 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 PPM1AP35813 382 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 GRM5P41594 1212 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 GTF2BQ00403 316 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 MCL1Q07820 350 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 KCNA1Q09470 495 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 GRIK3Q13003 919 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 PTPN14Q15678 1187 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 PTPROQ16827 1216 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 DUSP6Q16828 381 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 CSPP1Q1MSJ5 1256 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 DCAF4L1Q3SXM0 396 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 FOXD4L6Q3SYB3 417 aaPredicted RBP9.54□□□□□ -0.88
SMG6-216ENST00000575176 FOXD4L3Q6VB84 417 aaPredicted RBP9.54□□□□□ -0.88
SMG6-216ENST00000575176 ZPBP2Q6X784 338 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 SFR1Q86XK3 245 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 SLC17A8Q8NDX2 589 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 LEO1Q8WVC0 666 aaPredicted RBP9.54□□□□□ -0.88
SMG6-216ENST00000575176 ATXN2LQ8WWM7 1075 aaKnown RBP9.54□□□□□ -0.88
SMG6-216ENST00000575176 DDX12PQ92771 950 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 PGBD4Q96DM1 585 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 CALML4Q96GE6 196 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 SNX27Q96L92 541 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 IFT74Q96LB3 600 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 TMEM175Q9BSA9 504 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 KMT5AQ9NQR1 393 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 SPG21Q9NZD8 308 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 KLK14Q9P0G3 267 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 PTPRDP23468 1912 aa9.54□□□□□ -0.88
SMG6-216ENST00000575176 CCDC169A6NNP5 214 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms