RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 HOOK1Q9UJC3 728 aaKnown RBP17.82■□□□□ 0.44
PFN1-203ENST00000574872 INPP5FQ9Y2H2 1132 aa17.82■□□□□ 0.44
PFN1-203ENST00000574872 COL4A6Q14031 1691 aa17.81■□□□□ 0.44
PFN1-203ENST00000574872 ANKRD63C9JTQ0 380 aa17.81■□□□□ 0.44
PFN1-203ENST00000574872 ABLIM1O14639 778 aa17.81■□□□□ 0.44
PFN1-203ENST00000574872 HOXA2O43364 376 aa17.81■□□□□ 0.44
PFN1-203ENST00000574872 TOM1L1O75674 476 aa17.81■□□□□ 0.44
PFN1-203ENST00000574872 PROZP22891 400 aa17.81■□□□□ 0.44
PFN1-203ENST00000574872 OSTNP61366 133 aa17.81■□□□□ 0.44
PFN1-203ENST00000574872 STK4Q13043 487 aa17.81■□□□□ 0.44
PFN1-203ENST00000574872 NOLC1Q14978 699 aaKnown RBP eCLIP17.81■□□□□ 0.44
PFN1-203ENST00000574872 PPP2R2DQ66LE6 453 aa17.81■□□□□ 0.44
PFN1-203ENST00000574872 SLC39A4Q6P5W5 647 aa17.81■□□□□ 0.44
PFN1-203ENST00000574872 STXBP4Q6ZWJ1 553 aa17.81■□□□□ 0.44
PFN1-203ENST00000574872 SPRED2Q7Z698 418 aa17.81■□□□□ 0.44
PFN1-203ENST00000574872 MRPL10Q7Z7H8 261 aaKnown RBP17.81■□□□□ 0.44
PFN1-203ENST00000574872 NELFCDQ8IXH7 590 aa17.81■□□□□ 0.44
PFN1-203ENST00000574872 HACE1Q8IYU2 909 aa17.81■□□□□ 0.44
PFN1-203ENST00000574872 SYCP3Q8IZU3 236 aa17.81■□□□□ 0.44
PFN1-203ENST00000574872 CEP120Q8N960 986 aa17.81■□□□□ 0.44
PFN1-203ENST00000574872 KIAA0895Q8NCT3 520 aa17.81■□□□□ 0.44
PFN1-203ENST00000574872 CCDC47Q96A33 483 aaKnown RBP17.81■□□□□ 0.44
PFN1-203ENST00000574872 ZNF689Q96CS4 500 aaPredicted RBP17.81■□□□□ 0.44
PFN1-203ENST00000574872 HAPLN2Q9GZV7 340 aa17.81■□□□□ 0.44
PFN1-203ENST00000574872 SNTG2Q9NY99 539 aa17.81■□□□□ 0.44
PFN1-203ENST00000574872 HCSTQ9UBK5 93 aa17.81■□□□□ 0.44
PFN1-203ENST00000574872 PARP2Q9UGN5 583 aa17.81■□□□□ 0.44
PFN1-203ENST00000574872 GDAQ9Y2T3 454 aa17.81■□□□□ 0.44
PFN1-203ENST00000574872 LINC01553A4QN01 128 aa17.8■□□□□ 0.44
PFN1-203ENST00000574872 CLDN3O15551 220 aa17.8■□□□□ 0.44
PFN1-203ENST00000574872 PIGRP01833 764 aa17.8■□□□□ 0.44
PFN1-203ENST00000574872 MLH1P40692 756 aa17.8■□□□□ 0.44
PFN1-203ENST00000574872 CAMK4Q16566 473 aa17.8■□□□□ 0.44
PFN1-203ENST00000574872 SEZ6Q53EL9 994 aa17.8■□□□□ 0.44
PFN1-203ENST00000574872 GLB1LQ6UWU2 654 aa17.8■□□□□ 0.44
PFN1-203ENST00000574872 EPM2AIP1Q7L775 607 aaPredicted RBP17.8■□□□□ 0.44
PFN1-203ENST00000574872 APBB1IPQ7Z5R6 666 aaPredicted RBP17.8■□□□□ 0.44
PFN1-203ENST00000574872 THNSL1Q8IYQ7 743 aa17.8■□□□□ 0.44
PFN1-203ENST00000574872 SP7Q8TDD2 431 aaPredicted RBP17.8■□□□□ 0.44
PFN1-203ENST00000574872 SCFD1Q8WVM8 642 aa17.8■□□□□ 0.44
PFN1-203ENST00000574872 CASD1Q96PB1 797 aa17.8■□□□□ 0.44
PFN1-203ENST00000574872 TMEM117Q9H0C3 514 aa17.8■□□□□ 0.44
PFN1-203ENST00000574872 RSAD1Q9HA92 442 aa17.8■□□□□ 0.44
PFN1-203ENST00000574872 SLC28A3Q9HAS3 691 aa17.8■□□□□ 0.44
PFN1-203ENST00000574872 KLK14Q9P0G3 267 aa17.8■□□□□ 0.44
PFN1-203ENST00000574872 MTUS1Q9ULD2 1270 aa17.8■□□□□ 0.44
PFN1-203ENST00000574872 EXOC7Q9UPT5 735 aa17.8■□□□□ 0.44
PFN1-203ENST00000574872 EIF3DO15371 548 aaKnown RBP eCLIP17.79■□□□□ 0.44
PFN1-203ENST00000574872 OFD1O75665 1012 aa17.79■□□□□ 0.44
PFN1-203ENST00000574872 RECQL4O94761 1208 aa17.79■□□□□ 0.44
PFN1-203ENST00000574872 SMC2O95347 1197 aa17.79■□□□□ 0.44
PFN1-203ENST00000574872 MCF2P10911 925 aa17.79■□□□□ 0.44
PFN1-203ENST00000574872 HOXD13P35453 343 aa17.79■□□□□ 0.44
PFN1-203ENST00000574872 FXR1P51114 621 aaKnown RBP eCLIP17.79■□□□□ 0.44
PFN1-203ENST00000574872 AFF1P51825 1210 aaKnown RBP17.79■□□□□ 0.44
PFN1-203ENST00000574872 TAP1Q03518 808 aa17.79■□□□□ 0.44
PFN1-203ENST00000574872 MCL1Q07820 350 aa17.79■□□□□ 0.44
PFN1-203ENST00000574872 TMEM192Q8IY95 271 aa17.79■□□□□ 0.44
PFN1-203ENST00000574872 CMTR2Q8IYT2 770 aaKnown RBP17.79■□□□□ 0.44
PFN1-203ENST00000574872 FIBCD1Q8N539 461 aa17.79■□□□□ 0.44
PFN1-203ENST00000574872 SMARCE1Q969G3 411 aa17.79■□□□□ 0.44
PFN1-203ENST00000574872 ZFP42Q96MM3 310 aa17.79■□□□□ 0.44
PFN1-203ENST00000574872 GAD1Q99259 594 aa17.79■□□□□ 0.44
PFN1-203ENST00000574872 CERS4Q9HA82 394 aa17.79■□□□□ 0.44
PFN1-203ENST00000574872 PCDHA5Q9Y5H7 936 aa17.79■□□□□ 0.44
PFN1-203ENST00000574872 MRPL42Q9Y6G3 142 aaKnown RBP17.79■□□□□ 0.44
PFN1-203ENST00000574872 ZMYM2Q9UBW7 1377 aa17.79■□□□□ 0.44
PFN1-203ENST00000574872 RHOBTB3O94955 611 aa17.78■□□□□ 0.44
PFN1-203ENST00000574872 PSMD2Q13200 908 aa17.78■□□□□ 0.44
PFN1-203ENST00000574872 KCNB1Q14721 858 aa17.78■□□□□ 0.44
PFN1-203ENST00000574872 NOMO2Q5JPE7 1267 aa17.78■□□□□ 0.44
PFN1-203ENST00000574872 GPT2Q8TD30 523 aa17.78■□□□□ 0.44
PFN1-203ENST00000574872 FAM161BQ96MY7 647 aa17.78■□□□□ 0.44
PFN1-203ENST00000574872 MSTO1Q9BUK6 570 aa17.78■□□□□ 0.44
PFN1-203ENST00000574872 TMEM206Q9H813 350 aa17.78■□□□□ 0.44
PFN1-203ENST00000574872 FNDC1Q4ZHG4 1894 aaPredicted RBP17.78■□□□□ 0.44
PFN1-203ENST00000574872 UBE4BO95155 1302 aa17.77■□□□□ 0.44
PFN1-203ENST00000574872 CHD9Q3L8U1 2897 aa17.77■□□□□ 0.44
PFN1-203ENST00000574872 ARL5CA6NH57 179 aa17.77■□□□□ 0.44
PFN1-203ENST00000574872 POMCP01189 267 aa17.77■□□□□ 0.44
PFN1-203ENST00000574872 GRM5P41594 1212 aa17.77■□□□□ 0.44
PFN1-203ENST00000574872 SCNN1GP51170 649 aa17.77■□□□□ 0.44
PFN1-203ENST00000574872 ZBTB41Q5SVQ8 909 aa17.77■□□□□ 0.44
PFN1-203ENST00000574872 SPOUT1Q5T280 376 aaKnown RBP17.77■□□□□ 0.44
PFN1-203ENST00000574872 ISM2Q6H9L7 571 aa17.77■□□□□ 0.44
PFN1-203ENST00000574872 LRRC55Q6ZSA7 311 aa17.77■□□□□ 0.44
PFN1-203ENST00000574872 ELOA2Q8IYF1 753 aaPredicted RBP17.77■□□□□ 0.44
PFN1-203ENST00000574872 SMYD4Q8IYR2 804 aaPredicted RBP17.77■□□□□ 0.44
PFN1-203ENST00000574872 LRRC43Q8N309 656 aa17.77■□□□□ 0.44
PFN1-203ENST00000574872 ZNF507Q8TCN5 953 aa17.77■□□□□ 0.44
PFN1-203ENST00000574872 URGCPQ8TCY9 931 aa17.77■□□□□ 0.44
PFN1-203ENST00000574872 POMGNT1Q8WZA1 660 aa17.77■□□□□ 0.44
PFN1-203ENST00000574872 C17orf80Q9BSJ5 609 aa17.77■□□□□ 0.44
PFN1-203ENST00000574872 CCDC94Q9BW85 323 aaPredicted RBP17.77■□□□□ 0.44
PFN1-203ENST00000574872 CXCL16Q9H2A7 254 aa17.77■□□□□ 0.44
PFN1-203ENST00000574872 TTYH1Q9H313 450 aaPredicted RBP17.77■□□□□ 0.44
PFN1-203ENST00000574872 UBN1Q9NPG3 1134 aa17.77■□□□□ 0.44
PFN1-203ENST00000574872 TYW1Q9NV66 732 aaKnown RBP17.77■□□□□ 0.44
PFN1-203ENST00000574872 RMND1Q9NWS8 449 aa17.77■□□□□ 0.44
PFN1-203ENST00000574872 MAPK8IP1Q9UQF2 711 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms