RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 CAND2O75155 1236 aa26.21■■□□□ 1.79
ATPAF1-213ENST00000574428 ADRB2P07550 413 aa26.21■■□□□ 1.79
ATPAF1-213ENST00000574428 PCBP1Q15365 356 aaKnown RBP eCLIP26.21■■□□□ 1.79
ATPAF1-213ENST00000574428 TRIM60Q495X7 471 aa26.21■■□□□ 1.79
ATPAF1-213ENST00000574428 SEZ6Q53EL9 994 aa26.21■■□□□ 1.79
ATPAF1-213ENST00000574428 TRIM59Q8IWR1 403 aa26.21■■□□□ 1.79
ATPAF1-213ENST00000574428 FBXL18Q96ME1 805 aa26.21■■□□□ 1.79
ATPAF1-213ENST00000574428 NOC4LQ9BVI4 516 aaKnown RBP26.21■■□□□ 1.79
ATPAF1-213ENST00000574428 AGPAT5Q9NUQ2 364 aa26.21■■□□□ 1.79
ATPAF1-213ENST00000574428 A0A1B0GTH6 734 aa26.2■■□□□ 1.79
ATPAF1-213ENST00000574428 PES1O00541 588 aaKnown RBP26.2■■□□□ 1.79
ATPAF1-213ENST00000574428 N4BP3O15049 544 aa26.2■■□□□ 1.79
ATPAF1-213ENST00000574428 EXTL3O43909 919 aa26.2■■□□□ 1.79
ATPAF1-213ENST00000574428 HOXA11P31270 313 aaPredicted RBP26.2■■□□□ 1.79
ATPAF1-213ENST00000574428 ACOT2P49753 483 aa26.2■■□□□ 1.79
ATPAF1-213ENST00000574428 FAM26DQ5JW98 314 aa26.2■■□□□ 1.79
ATPAF1-213ENST00000574428 MIIPQ5JXC2 388 aa26.2■■□□□ 1.79
ATPAF1-213ENST00000574428 ANKRD33Q7Z3H0 272 aa26.2■■□□□ 1.79
ATPAF1-213ENST00000574428 CDT1Q9H211 546 aa26.2■■□□□ 1.79
ATPAF1-213ENST00000574428 METTL14Q9HCE5 456 aaKnown RBP26.2■■□□□ 1.79
ATPAF1-213ENST00000574428 KIAA0100Q14667 2235 aaKnown RBP26.2■■□□□ 1.78
ATPAF1-213ENST00000574428 A0A1B0GUA9 196 aa26.2■■□□□ 1.78
ATPAF1-213ENST00000574428 KIAA0391O15091 583 aaKnown RBP26.2■■□□□ 1.78
ATPAF1-213ENST00000574428 NCBP1Q09161 790 aaKnown RBP26.2■■□□□ 1.78
ATPAF1-213ENST00000574428 MAN2A1Q16706 1144 aa26.2■■□□□ 1.78
ATPAF1-213ENST00000574428 PTPN21Q16825 1174 aa26.2■■□□□ 1.78
ATPAF1-213ENST00000574428 PIN4Q9Y237 131 aaKnown RBP26.2■■□□□ 1.78
ATPAF1-213ENST00000574428 TLR3O15455 904 aaKnown RBP26.19■■□□□ 1.78
ATPAF1-213ENST00000574428 CBFA2T2O43439 604 aa26.19■■□□□ 1.78
ATPAF1-213ENST00000574428 RPS6KA5O75582 802 aa26.19■■□□□ 1.78
ATPAF1-213ENST00000574428 GHRP10912 638 aa26.19■■□□□ 1.78
ATPAF1-213ENST00000574428 FILIP1LQ4L180 1135 aa26.19■■□□□ 1.78
ATPAF1-213ENST00000574428 DCAF17Q5H9S7 520 aaPredicted RBP26.19■■□□□ 1.78
ATPAF1-213ENST00000574428 FBXO47Q5MNV8 452 aa26.19■■□□□ 1.78
ATPAF1-213ENST00000574428 TRAF7Q6Q0C0 670 aa26.19■■□□□ 1.78
ATPAF1-213ENST00000574428 RTN4Q9NQC3 1192 aaKnown RBP26.19■■□□□ 1.78
ATPAF1-213ENST00000574428 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.19■■□□□ 1.78
ATPAF1-213ENST00000574428 TULP1O00294 542 aaPredicted RBP26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 TEX33O43247 280 aa26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 FAM189A1O60320 539 aa26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 TPM2P07951 284 aa26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 TLE2Q04725 743 aa26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 NR1I3Q14994 352 aa26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 VWA3BQ502W6 1294 aa26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 CRELD2Q6UXH1 353 aaPredicted RBP26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 CAGE1Q8TC20 777 aa26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 AGO3Q9H9G7 860 aaKnown RBP26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 LGALS16A8MUM7 142 aa26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 MAPK13O15264 365 aa26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 OGTO15294 1046 aa26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 TNFSF9P41273 254 aa26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 LPIN1Q14693 890 aa26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 C1orf53Q5VUE5 145 aa26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 TCERG1LQ5VWI1 586 aa26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 NOTUMQ6P988 496 aa26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 CCDC155Q8N6L0 562 aa26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 CEP120Q8N960 986 aa26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 MRFAP1L1Q96HT8 127 aa26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 KIAA1586Q9HCI6 787 aa26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 ST3GAL5Q9UNP4 418 aa26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 ATP11BQ9Y2G3 1177 aa26.18■■□□□ 1.78
ATPAF1-213ENST00000574428 ZNF233A6NK53 670 aa26.17■■□□□ 1.78
ATPAF1-213ENST00000574428 DCDC2CA8MYV0 355 aa26.17■■□□□ 1.78
ATPAF1-213ENST00000574428 TRIM49P0CI25 452 aa26.17■■□□□ 1.78
ATPAF1-213ENST00000574428 TRIM49CP0CI26 452 aa26.17■■□□□ 1.78
ATPAF1-213ENST00000574428 MCF2P10911 925 aa26.17■■□□□ 1.78
ATPAF1-213ENST00000574428 KRT13P13646 458 aa26.17■■□□□ 1.78
ATPAF1-213ENST00000574428 RBL2Q08999 1139 aa26.17■■□□□ 1.78
ATPAF1-213ENST00000574428 BFSP1Q12934 665 aa26.17■■□□□ 1.78
ATPAF1-213ENST00000574428 NFX1Q12986 1120 aaKnown RBP26.17■■□□□ 1.78
ATPAF1-213ENST00000574428 INTS8Q75QN2 995 aaKnown RBP26.17■■□□□ 1.78
ATPAF1-213ENST00000574428 NECAB2Q7Z6G3 386 aa26.17■■□□□ 1.78
ATPAF1-213ENST00000574428 THNSL1Q8IYQ7 743 aa26.17■■□□□ 1.78
ATPAF1-213ENST00000574428 PLEKHO2Q8TD55 490 aa26.17■■□□□ 1.78
ATPAF1-213ENST00000574428 NDST4Q9H3R1 872 aa26.17■■□□□ 1.78
ATPAF1-213ENST00000574428 LDHAP00338 332 aaKnown RBP26.16■■□□□ 1.78
ATPAF1-213ENST00000574428 TPM3P06753 285 aa26.16■■□□□ 1.78
ATPAF1-213ENST00000574428 EN2P19622 333 aaPredicted RBP26.16■■□□□ 1.78
ATPAF1-213ENST00000574428 AXLP30530 894 aa26.16■■□□□ 1.78
ATPAF1-213ENST00000574428 CD52P31358 61 aa26.16■■□□□ 1.78
ATPAF1-213ENST00000574428 OSTNP61366 133 aa26.16■■□□□ 1.78
ATPAF1-213ENST00000574428 CYP24A1Q07973 514 aa26.16■■□□□ 1.78
ATPAF1-213ENST00000574428 FAAP100Q0VG06 881 aa26.16■■□□□ 1.78
ATPAF1-213ENST00000574428 BFSP2Q13515 415 aa26.16■■□□□ 1.78
ATPAF1-213ENST00000574428 LRRC26Q2I0M4 334 aa26.16■■□□□ 1.78
ATPAF1-213ENST00000574428 SLC35C1Q96A29 364 aa26.16■■□□□ 1.78
ATPAF1-213ENST00000574428 TRIM44Q96DX7 344 aaPredicted RBP26.16■■□□□ 1.78
ATPAF1-213ENST00000574428 ADPGKQ9BRR6 497 aa26.16■■□□□ 1.78
ATPAF1-213ENST00000574428 NPTXRO95502 500 aa26.15■■□□□ 1.78
ATPAF1-213ENST00000574428 VAMP7P51809 220 aa26.15■■□□□ 1.78
ATPAF1-213ENST00000574428 DLG4P78352 724 aa26.15■■□□□ 1.78
ATPAF1-213ENST00000574428 UBXN1Q04323 297 aa26.15■■□□□ 1.78
ATPAF1-213ENST00000574428 MBTPS1Q14703 1052 aa26.15■■□□□ 1.78
ATPAF1-213ENST00000574428 SLC27A1Q6PCB7 646 aa26.15■■□□□ 1.78
ATPAF1-213ENST00000574428 LRRC8DQ7L1W4 858 aa26.15■■□□□ 1.78
ATPAF1-213ENST00000574428 CCDC127Q96BQ5 260 aa26.15■■□□□ 1.78
ATPAF1-213ENST00000574428 MFSD14AQ96MC6 490 aa26.15■■□□□ 1.78
ATPAF1-213ENST00000574428 TOX2Q96NM4 488 aa26.15■■□□□ 1.78
ATPAF1-213ENST00000574428 EIF2AQ9BY44 585 aaKnown RBP26.15■■□□□ 1.78
ATPAF1-213ENST00000574428 RBAKQ9NYW8 714 aaPredicted RBP26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms