RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 ITGA4P13612 1032 aa17.19■□□□□ 0.34
CCNE1-204ENST00000574121 PPP1R2P41236 205 aa17.19■□□□□ 0.34
CCNE1-204ENST00000574121 KCNA1Q09470 495 aa17.19■□□□□ 0.34
CCNE1-204ENST00000574121 KNOP1Q1ED39 458 aaKnown RBP17.19■□□□□ 0.34
CCNE1-204ENST00000574121 ZNF658Q5TYW1 1059 aaPredicted RBP17.19■□□□□ 0.34
CCNE1-204ENST00000574121 SLC39A4Q6P5W5 647 aa17.19■□□□□ 0.34
CCNE1-204ENST00000574121 ABI1Q8IZP0 508 aa17.19■□□□□ 0.34
CCNE1-204ENST00000574121 GUF1Q8N442 669 aaKnown RBP17.19■□□□□ 0.34
CCNE1-204ENST00000574121 ZNF689Q96CS4 500 aaPredicted RBP17.19■□□□□ 0.34
CCNE1-204ENST00000574121 YME1L1Q96TA2 773 aa17.19■□□□□ 0.34
CCNE1-204ENST00000574121 TMEM117Q9H0C3 514 aa17.19■□□□□ 0.34
CCNE1-204ENST00000574121 NXF3Q9H4D5 531 aaKnown RBP17.19■□□□□ 0.34
CCNE1-204ENST00000574121 RC3H2Q9HBD1 1191 aaKnown RBP17.19■□□□□ 0.34
CCNE1-204ENST00000574121 KIAA1468Q9P260 1216 aa17.19■□□□□ 0.34
CCNE1-204ENST00000574121 GIT1Q9Y2X7 761 aa17.19■□□□□ 0.34
CCNE1-204ENST00000574121 COL4A6Q14031 1691 aa17.18■□□□□ 0.34
CCNE1-204ENST00000574121 A0A0B4J269 797 aa17.18■□□□□ 0.34
CCNE1-204ENST00000574121 KIAA0391O15091 583 aaKnown RBP17.18■□□□□ 0.34
CCNE1-204ENST00000574121 INPPL1O15357 1258 aa17.18■□□□□ 0.34
CCNE1-204ENST00000574121 GARTP22102 1010 aa17.18■□□□□ 0.34
CCNE1-204ENST00000574121 GRM5P41594 1212 aa17.18■□□□□ 0.34
CCNE1-204ENST00000574121 POU5F1Q01860 360 aaKnown RBP17.18■□□□□ 0.34
CCNE1-204ENST00000574121 HSP90AA2PQ14568 343 aaPredicted RBP17.18■□□□□ 0.34
CCNE1-204ENST00000574121 CAMK4Q16566 473 aa17.18■□□□□ 0.34
CCNE1-204ENST00000574121 FAM109BQ6ICB4 259 aaPredicted RBP17.18■□□□□ 0.34
CCNE1-204ENST00000574121 GLB1LQ6UWU2 654 aa17.18■□□□□ 0.34
CCNE1-204ENST00000574121 AGMOQ6ZNB7 445 aa17.18■□□□□ 0.34
CCNE1-204ENST00000574121 HS2ST1Q7LGA3 356 aa17.18■□□□□ 0.34
CCNE1-204ENST00000574121 CMTR2Q8IYT2 770 aaKnown RBP17.18■□□□□ 0.34
CCNE1-204ENST00000574121 RNF169Q8NCN4 708 aa17.18■□□□□ 0.34
CCNE1-204ENST00000574121 GOLGA5Q8TBA6 731 aa17.18■□□□□ 0.34
CCNE1-204ENST00000574121 SP7Q8TDD2 431 aaPredicted RBP17.18■□□□□ 0.34
CCNE1-204ENST00000574121 CCDC94Q9BW85 323 aaPredicted RBP17.18■□□□□ 0.34
CCNE1-204ENST00000574121 RSAD1Q9HA92 442 aa17.18■□□□□ 0.34
CCNE1-204ENST00000574121 MSRAQ9UJ68 235 aa17.18■□□□□ 0.34
CCNE1-204ENST00000574121 ANKRD63C9JTQ0 380 aa17.17■□□□□ 0.34
CCNE1-204ENST00000574121 OGTO15294 1046 aa17.17■□□□□ 0.34
CCNE1-204ENST00000574121 FGFR1P11362 822 aa17.17■□□□□ 0.34
CCNE1-204ENST00000574121 HOXD13P35453 343 aa17.17■□□□□ 0.34
CCNE1-204ENST00000574121 MATR3P43243 847 aaKnown RBP eCLIP17.17■□□□□ 0.34
CCNE1-204ENST00000574121 TMCO2Q7Z6W1 182 aaPredicted RBP17.17■□□□□ 0.34
CCNE1-204ENST00000574121 ZBTB33Q86T24 672 aa17.17■□□□□ 0.34
CCNE1-204ENST00000574121 TMEM174Q8WUU8 243 aa17.17■□□□□ 0.34
CCNE1-204ENST00000574121 ERCC4Q92889 916 aaPredicted RBP17.17■□□□□ 0.34
CCNE1-204ENST00000574121 ZBTB45Q96K62 511 aaPredicted RBP17.17■□□□□ 0.34
CCNE1-204ENST00000574121 MSTO1Q9BUK6 570 aa17.17■□□□□ 0.34
CCNE1-204ENST00000574121 MRPL9Q9BYD2 267 aaKnown RBP17.17■□□□□ 0.34
CCNE1-204ENST00000574121 PBX4Q9BYU1 374 aa17.17■□□□□ 0.34
CCNE1-204ENST00000574121 TOPORSQ9NS56 1045 aaPredicted RBP17.17■□□□□ 0.34
CCNE1-204ENST00000574121 RNF19AQ9NV58 838 aa17.17■□□□□ 0.34
CCNE1-204ENST00000574121 KANSL3Q9P2N6 904 aa17.17■□□□□ 0.34
CCNE1-204ENST00000574121 MAN1B1Q9UKM7 699 aa17.17■□□□□ 0.34
CCNE1-204ENST00000574121 HES2Q9Y543 173 aa17.17■□□□□ 0.34
CCNE1-204ENST00000574121 GRXCR1A8MXD5 290 aa17.16■□□□□ 0.34
CCNE1-204ENST00000574121 PDXKO00764 312 aa17.16■□□□□ 0.34
CCNE1-204ENST00000574121 LDHAP00338 332 aaKnown RBP17.16■□□□□ 0.34
CCNE1-204ENST00000574121 CLTAP09496 248 aa17.16■□□□□ 0.34
CCNE1-204ENST00000574121 ADSSP30520 456 aa17.16■□□□□ 0.34
CCNE1-204ENST00000574121 YARSP54577 528 aaKnown RBP17.16■□□□□ 0.34
CCNE1-204ENST00000574121 MORC3Q14149 939 aa17.16■□□□□ 0.34
CCNE1-204ENST00000574121 CLLU1OSQ5K130 101 aa17.16■□□□□ 0.34
CCNE1-204ENST00000574121 FAM117BQ6P1L5 589 aa17.16■□□□□ 0.34
CCNE1-204ENST00000574121 NELFCDQ8IXH7 590 aa17.16■□□□□ 0.34
CCNE1-204ENST00000574121 C12orf56Q8IXR9 622 aa17.16■□□□□ 0.34
CCNE1-204ENST00000574121 POMGNT1Q8WZA1 660 aa17.16■□□□□ 0.34
CCNE1-204ENST00000574121 LPPQ93052 612 aa17.16■□□□□ 0.34
CCNE1-204ENST00000574121 CASD1Q96PB1 797 aa17.16■□□□□ 0.34
CCNE1-204ENST00000574121 AGPAT3Q9NRZ7 376 aa17.16■□□□□ 0.34
CCNE1-204ENST00000574121 TYW1Q9NV66 732 aaKnown RBP17.16■□□□□ 0.34
CCNE1-204ENST00000574121 GDAQ9Y2T3 454 aa17.16■□□□□ 0.34
CCNE1-204ENST00000574121 TMEM265A0A087WTH1 108 aa17.15■□□□□ 0.34
CCNE1-204ENST00000574121 CARNS1A5YM72 827 aa17.15■□□□□ 0.34
CCNE1-204ENST00000574121 TGFB1I1O43294 461 aa17.15■□□□□ 0.34
CCNE1-204ENST00000574121 FAM189A1O60320 539 aa17.15■□□□□ 0.34
CCNE1-204ENST00000574121 OFD1O75665 1012 aa17.15■□□□□ 0.34
CCNE1-204ENST00000574121 RECQL4O94761 1208 aa17.15■□□□□ 0.34
CCNE1-204ENST00000574121 IBSPP21815 317 aaPredicted RBP17.15■□□□□ 0.34
CCNE1-204ENST00000574121 RABGGTBP53611 331 aa17.15■□□□□ 0.34
CCNE1-204ENST00000574121 STIM1Q13586 685 aa17.15■□□□□ 0.34
CCNE1-204ENST00000574121 BTG3Q14201 252 aaPredicted RBP17.15■□□□□ 0.34
CCNE1-204ENST00000574121 NOMO2Q5JPE7 1267 aa17.15■□□□□ 0.34
CCNE1-204ENST00000574121 ARMCX5Q6P1M9 558 aa17.15■□□□□ 0.34
CCNE1-204ENST00000574121 RBM43Q6ZSC3 357 aaKnown RBP17.15■□□□□ 0.34
CCNE1-204ENST00000574121 THNSL1Q8IYQ7 743 aa17.15■□□□□ 0.34
CCNE1-204ENST00000574121 LRRC43Q8N309 656 aa17.15■□□□□ 0.34
CCNE1-204ENST00000574121 URGCPQ8TCY9 931 aa17.15■□□□□ 0.34
CCNE1-204ENST00000574121 SYAP1Q96A49 352 aaPredicted RBP17.15■□□□□ 0.34
CCNE1-204ENST00000574121 ACAP3Q96P50 834 aa17.15■□□□□ 0.34
CCNE1-204ENST00000574121 HAPLN2Q9GZV7 340 aa17.15■□□□□ 0.34
CCNE1-204ENST00000574121 RNF39Q9H2S5 420 aa17.15■□□□□ 0.34
CCNE1-204ENST00000574121 KCTD10Q9H3F6 313 aa17.15■□□□□ 0.34
CCNE1-204ENST00000574121 PLEKHA5Q9HAU0 1116 aa17.15■□□□□ 0.34
CCNE1-204ENST00000574121 SNTG2Q9NY99 539 aa17.15■□□□□ 0.34
CCNE1-204ENST00000574121 PARP2Q9UGN5 583 aa17.15■□□□□ 0.34
CCNE1-204ENST00000574121 AGO2Q9UKV8 859 aaKnown RBP17.15■□□□□ 0.34
CCNE1-204ENST00000574121 TRAF3IP3Q9Y228 551 aa17.15■□□□□ 0.34
CCNE1-204ENST00000574121 ARL5CA6NH57 179 aa17.14■□□□□ 0.33
CCNE1-204ENST00000574121 TBKBP1A7MCY6 615 aa17.14■□□□□ 0.33
CCNE1-204ENST00000574121 MEIS3P2A8K0S8 358 aa17.14■□□□□ 0.33
CCNE1-204ENST00000574121 TISP43B9A030 160 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms