RNA–Protein interactions for RNA: ENST00000573992.5

EDC4-207, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 1 (best)

Gene EDC4, Length 3,934 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-207ENST00000573992 ZMYND8Q9ULU4 1186 aaPredicted RBP12.26□□□□□ -0.45
EDC4-207ENST00000573992 PCDH11YQ9BZA8 1340 aa12.26□□□□□ -0.45
EDC4-207ENST00000573992 ALADP13716 330 aa12.26□□□□□ -0.45
EDC4-207ENST00000573992 ITGA8P53708 1063 aa12.26□□□□□ -0.45
EDC4-207ENST00000573992 USP46P62068 366 aa12.26□□□□□ -0.45
EDC4-207ENST00000573992 CCDC15Q0P6D6 951 aa12.26□□□□□ -0.45
EDC4-207ENST00000573992 OVGP1Q12889 678 aa12.26□□□□□ -0.45
EDC4-207ENST00000573992 DNAL1Q4LDG9 190 aa12.26□□□□□ -0.45
EDC4-207ENST00000573992 ZC3H12AQ5D1E8 599 aaKnown RBP12.26□□□□□ -0.45
EDC4-207ENST00000573992 IZUMO3Q5VZ72 239 aa12.26□□□□□ -0.45
EDC4-207ENST00000573992 LVRNQ6Q4G3 990 aa12.26□□□□□ -0.45
EDC4-207ENST00000573992 BRIP1Q9BX63 1249 aa12.26□□□□□ -0.45
EDC4-207ENST00000573992 TSSK1BQ9BXA7 367 aa12.26□□□□□ -0.45
EDC4-207ENST00000573992 CCDC134Q9H6E4 229 aa12.26□□□□□ -0.45
EDC4-207ENST00000573992 PREBQ9HCU5 417 aa12.26□□□□□ -0.45
EDC4-207ENST00000573992 DDX18Q9NVP1 670 aaKnown RBP12.26□□□□□ -0.45
EDC4-207ENST00000573992 MTO1Q9Y2Z2 717 aaKnown RBP12.26□□□□□ -0.45
EDC4-207ENST00000573992 STARD13Q9Y3M8 1113 aa12.26□□□□□ -0.45
EDC4-207ENST00000573992 SCINQ9Y6U3 715 aa12.26□□□□□ -0.45
EDC4-207ENST00000573992 INHBAP08476 426 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 RGS2P41220 211 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 CASP7P55210 303 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 LIN52Q52LA3 116 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 DGKHQ86XP1 1220 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 TEKT1Q969V4 418 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 RBM15Q96T37 977 aaKnown RBP eCLIP12.25□□□□□ -0.454e-7■■■■■ 33.2
EDC4-207ENST00000573992 GPCPD1Q9NPB8 672 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 ATP8A2Q9NTI2 1148 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 CLIC5Q9NZA1 410 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 MYO5BQ9ULV0 1848 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 XRN1Q8IZH2 1706 aaKnown RBP12.25□□□□□ -0.45
EDC4-207ENST00000573992 NR3C1P04150 777 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 GYG1P46976 350 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 TMED10P49755 219 aaKnown RBP12.25□□□□□ -0.45
EDC4-207ENST00000573992 HIC1Q14526 733 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 LIN9Q5TKA1 542 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 CENPUQ71F23 418 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 RBM12BQ8IXT5 1001 aaKnown RBP12.25□□□□□ -0.45
EDC4-207ENST00000573992 PPM1KQ8N3J5 372 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 SUPT20HQ8NEM7 779 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 LENG1Q96BZ8 264 aaPredicted RBP12.25□□□□□ -0.45
EDC4-207ENST00000573992 CCDC124Q96CT7 223 aaKnown RBP12.25□□□□□ -0.45
EDC4-207ENST00000573992 LRGUKQ96M69 825 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 UBE2TQ9NPD8 197 aaPredicted RBP12.25□□□□□ -0.45
EDC4-207ENST00000573992 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.25□□□□□ -0.452e-6■■■□□ 16.5
EDC4-207ENST00000573992 BTNL10A8MVZ5 291 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 NBPF26B4DH59 902 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 ATP6V1B1P15313 513 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 ATF7P17544 494 aaPredicted RBP12.25□□□□□ -0.45
EDC4-207ENST00000573992 KNOP1Q1ED39 458 aaKnown RBP12.25□□□□□ -0.45
EDC4-207ENST00000573992 P3H1Q32P28 736 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 NSMFQ6X4W1 530 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 NBPF15Q8N660 670 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 JAG2Q9Y219 1238 aa12.25□□□□□ -0.45
EDC4-207ENST00000573992 A8MXQ7 604 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 E9PMD0 336 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 STRNO43815 780 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 ATF3P18847 181 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 BTKQ06187 659 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 AP1B1Q10567 949 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 RRP1BQ14684 758 aaKnown RBP12.24□□□□□ -0.45
EDC4-207ENST00000573992 SLC45A4Q5BKX6 768 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 USP37Q86T82 979 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 SLC13A5Q86YT5 568 aaPredicted RBP12.24□□□□□ -0.45
EDC4-207ENST00000573992 ZNF333Q96JL9 665 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 HEMGNQ9BXL5 484 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 IFT122Q9HBG6 1241 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 CLDN3O15551 220 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 TLR2O60603 784 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 CLPTM1O96005 669 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 LYNP07948 512 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 COMTP21964 271 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 PIK3CAP42336 1068 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 SERPINB8P50452 374 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 KAZNQ674X7 775 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.24□□□□□ -0.45
EDC4-207ENST00000573992 MIGA2Q7L4E1 593 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 VTI1AQ96AJ9 217 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 CCDC28BQ9BUN5 200 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 TMPRSS15P98073 1019 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 OCRLQ01968 901 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 DCTN2Q13561 401 aaKnown RBP12.24□□□□□ -0.45
EDC4-207ENST00000573992 EDRF1Q3B7T1 1238 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 CC2D2BQ6DHV5 1058 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 MFSD5Q6N075 450 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 ZNF746Q6NUN9 644 aaPredicted RBP12.24□□□□□ -0.45
EDC4-207ENST00000573992 SYDE1Q6ZW31 735 aaPredicted RBP12.24□□□□□ -0.45
EDC4-207ENST00000573992 DNAJC10Q8IXB1 793 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 SYNE4Q8N205 404 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 ATL2Q8NHH9 583 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 PYROXD1Q8WU10 500 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 LMCD1Q9NZU5 365 aa12.24□□□□□ -0.45
EDC4-207ENST00000573992 FAM205AQ6ZU69 1335 aa12.23□□□□□ -0.45
EDC4-207ENST00000573992 SMIM31A0A1B0GVY4 71 aa12.23□□□□□ -0.45
EDC4-207ENST00000573992 GH1P01241 217 aa12.23□□□□□ -0.45
EDC4-207ENST00000573992 VAV1P15498 845 aa12.23□□□□□ -0.45
EDC4-207ENST00000573992 BFSP1Q12934 665 aa12.23□□□□□ -0.45
EDC4-207ENST00000573992 ORC2Q13416 577 aaPredicted RBP12.23□□□□□ -0.45
EDC4-207ENST00000573992 KHDC1Q4VXA5 237 aaKnown RBP12.23□□□□□ -0.45
EDC4-207ENST00000573992 MDH1BQ5I0G3 518 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms