RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 TXLNAP40222 546 aa30.52■■■□□ 2.48
SCARF1-207ENST00000573867 ALDH7A1P49419 539 aaKnown RBP30.52■■■□□ 2.48
SCARF1-207ENST00000573867 NCKAP1LP55160 1127 aa30.52■■■□□ 2.48
SCARF1-207ENST00000573867 AXDND1Q5T1B0 1012 aaPredicted RBP30.52■■■□□ 2.48
SCARF1-207ENST00000573867 ASB2Q96Q27 587 aa30.52■■■□□ 2.48
SCARF1-207ENST00000573867 PTPRHQ9HD43 1115 aa30.52■■■□□ 2.48
SCARF1-207ENST00000573867 KANSL3Q9P2N6 904 aa30.52■■■□□ 2.48
SCARF1-207ENST00000573867 PARP2Q9UGN5 583 aa30.52■■■□□ 2.48
SCARF1-207ENST00000573867 COG5Q9UP83 839 aa30.52■■■□□ 2.48
SCARF1-207ENST00000573867 TNFSF13BQ9Y275 285 aa30.52■■■□□ 2.48
SCARF1-207ENST00000573867 ABLIM1O14639 778 aa30.51■■■□□ 2.47
SCARF1-207ENST00000573867 SHC4Q6S5L8 630 aa30.51■■■□□ 2.47
SCARF1-207ENST00000573867 HACE1Q8IYU2 909 aa30.51■■■□□ 2.47
SCARF1-207ENST00000573867 FIZ1Q96SL8 496 aa30.51■■■□□ 2.47
SCARF1-207ENST00000573867 MRPL4Q9BYD3 311 aaKnown RBP30.51■■■□□ 2.47
SCARF1-207ENST00000573867 MYH11P35749 1972 aa30.5■■■□□ 2.47
SCARF1-207ENST00000573867 RECQL4O94761 1208 aa30.5■■■□□ 2.47
SCARF1-207ENST00000573867 KCNQ1P51787 676 aa30.5■■■□□ 2.47
SCARF1-207ENST00000573867 MRPS5P82675 430 aaKnown RBP30.5■■■□□ 2.47
SCARF1-207ENST00000573867 DSC1Q08554 894 aa30.5■■■□□ 2.47
SCARF1-207ENST00000573867 IGSF21Q96ID5 467 aa30.5■■■□□ 2.47
SCARF1-207ENST00000573867 ADPGKQ9BRR6 497 aa30.5■■■□□ 2.47
SCARF1-207ENST00000573867 VN1R3Q9BXE9 311 aa30.5■■■□□ 2.47
SCARF1-207ENST00000573867 CDT1Q9H211 546 aa30.5■■■□□ 2.47
SCARF1-207ENST00000573867 LARSQ9P2J5 1176 aaKnown RBP30.5■■■□□ 2.47
SCARF1-207ENST00000573867 BRWD1Q9NSI6 2320 aa30.49■■■□□ 2.47
SCARF1-207ENST00000573867 MYMKA6NI61 221 aa30.49■■■□□ 2.47
SCARF1-207ENST00000573867 CUTAO60888 179 aa30.49■■■□□ 2.47
SCARF1-207ENST00000573867 FAM13AO94988 1023 aa30.49■■■□□ 2.47
SCARF1-207ENST00000573867 PROZP22891 400 aa30.49■■■□□ 2.47
SCARF1-207ENST00000573867 DCAF4L1Q3SXM0 396 aa30.49■■■□□ 2.47
SCARF1-207ENST00000573867 COLGALT2Q8IYK4 626 aa30.49■■■□□ 2.47
SCARF1-207ENST00000573867 PDILTQ8N807 584 aa30.49■■■□□ 2.47
SCARF1-207ENST00000573867 CEP120Q8N960 986 aa30.49■■■□□ 2.47
SCARF1-207ENST00000573867 PABPC5Q96DU9 382 aaKnown RBP30.49■■■□□ 2.47
SCARF1-207ENST00000573867 PARVGQ9HBI0 331 aa30.49■■■□□ 2.47
SCARF1-207ENST00000573867 ZMYM2Q9UBW7 1377 aa30.49■■■□□ 2.47
SCARF1-207ENST00000573867 LINC01565O15544 149 aa30.48■■■□□ 2.47
SCARF1-207ENST00000573867 KRT18P05783 430 aaKnown RBP30.48■■■□□ 2.47
SCARF1-207ENST00000573867 SMTNP53814 917 aa30.48■■■□□ 2.47
SCARF1-207ENST00000573867 CTC1Q2NKJ3 1217 aa30.48■■■□□ 2.47
SCARF1-207ENST00000573867 TJAP1Q5JTD0 557 aa30.48■■■□□ 2.47
SCARF1-207ENST00000573867 PLPP4Q5VZY2 271 aa30.48■■■□□ 2.47
SCARF1-207ENST00000573867 ATL3Q6DD88 541 aa30.48■■■□□ 2.47
SCARF1-207ENST00000573867 CCDC73Q6ZRK6 1079 aa30.48■■■□□ 2.47
SCARF1-207ENST00000573867 DYMQ7RTS9 669 aa30.48■■■□□ 2.47
SCARF1-207ENST00000573867 MYCT1Q8N699 235 aa30.48■■■□□ 2.47
SCARF1-207ENST00000573867 MICAL1Q8TDZ2 1067 aa30.48■■■□□ 2.47
SCARF1-207ENST00000573867 KCNN1Q92952 543 aa30.48■■■□□ 2.47
SCARF1-207ENST00000573867 ZBTB45Q96K62 511 aaPredicted RBP30.48■■■□□ 2.47
SCARF1-207ENST00000573867 TCF25Q9BQ70 676 aa30.48■■■□□ 2.47
SCARF1-207ENST00000573867 TMEM175Q9BSA9 504 aa30.48■■■□□ 2.47
SCARF1-207ENST00000573867 IGFLR1Q9H665 355 aa30.48■■■□□ 2.47
SCARF1-207ENST00000573867 F8W810 466 aa30.47■■■□□ 2.47
SCARF1-207ENST00000573867 PTGESO14684 152 aa30.47■■■□□ 2.47
SCARF1-207ENST00000573867 NRP1O14786 923 aa30.47■■■□□ 2.47
SCARF1-207ENST00000573867 KCNA5P22460 613 aa30.47■■■□□ 2.47
SCARF1-207ENST00000573867 LTBRP36941 435 aa30.47■■■□□ 2.47
SCARF1-207ENST00000573867 STAT6P42226 847 aa30.47■■■□□ 2.47
SCARF1-207ENST00000573867 KRT17Q04695 432 aa30.47■■■□□ 2.47
SCARF1-207ENST00000573867 HAUS6Q7Z4H7 955 aa30.47■■■□□ 2.47
SCARF1-207ENST00000573867 RBM23Q86U06 439 aaKnown RBP30.47■■■□□ 2.47
SCARF1-207ENST00000573867 KCNG4Q8TDN1 519 aa30.47■■■□□ 2.47
SCARF1-207ENST00000573867 DNAJC19Q96DA6 116 aa30.47■■■□□ 2.47
SCARF1-207ENST00000573867 TMEM169Q96HH4 297 aa30.47■■■□□ 2.47
SCARF1-207ENST00000573867 MARCH5Q9NX47 278 aa30.47■■■□□ 2.47
SCARF1-207ENST00000573867 PUF60Q9UHX1 559 aaKnown RBP30.47■■■□□ 2.47
SCARF1-207ENST00000573867 RCOR1Q9UKL0 485 aa30.47■■■□□ 2.47
SCARF1-207ENST00000573867 PCDHA7Q9UN72 937 aa30.47■■■□□ 2.47
SCARF1-207ENST00000573867 GDAQ9Y2T3 454 aa30.47■■■□□ 2.47
SCARF1-207ENST00000573867 HIDE1A8MVS5 230 aa30.46■■■□□ 2.47
SCARF1-207ENST00000573867 NRIP1P48552 1158 aa30.46■■■□□ 2.47
SCARF1-207ENST00000573867 DLX2Q07687 328 aaPredicted RBP30.46■■■□□ 2.47
SCARF1-207ENST00000573867 E2F4Q16254 413 aa30.46■■■□□ 2.47
SCARF1-207ENST00000573867 ZNF568Q3ZCX4 644 aa30.46■■■□□ 2.47
SCARF1-207ENST00000573867 SV2BQ7L1I2 683 aa30.46■■■□□ 2.47
SCARF1-207ENST00000573867 ZBTB33Q86T24 672 aa30.46■■■□□ 2.47
SCARF1-207ENST00000573867 DDX12PQ92771 950 aa30.46■■■□□ 2.47
SCARF1-207ENST00000573867 FAM193BQ96PV7 902 aaPredicted RBP30.46■■■□□ 2.47
SCARF1-207ENST00000573867 COL25A1Q9BXS0 654 aaPredicted RBP30.46■■■□□ 2.47
SCARF1-207ENST00000573867 ZHX3Q9H4I2 956 aa30.46■■■□□ 2.47
SCARF1-207ENST00000573867 ENTPD7Q9NQZ7 604 aa30.46■■■□□ 2.47
SCARF1-207ENST00000573867 CLDND1Q9NY35 253 aa30.46■■■□□ 2.47
SCARF1-207ENST00000573867 CACNG4Q9UBN1 327 aa30.46■■■□□ 2.47
SCARF1-207ENST00000573867 PRG3Q9Y2Y8 225 aaPredicted RBP30.46■■■□□ 2.47
SCARF1-207ENST00000573867 PER2O15055 1255 aa30.45■■■□□ 2.47
SCARF1-207ENST00000573867 TBCAO75347 108 aaKnown RBP30.45■■■□□ 2.47
SCARF1-207ENST00000573867 GRIK3Q13003 919 aa30.45■■■□□ 2.47
SCARF1-207ENST00000573867 BECN1Q14457 450 aa30.45■■■□□ 2.47
SCARF1-207ENST00000573867 HAPLN2Q9GZV7 340 aa30.45■■■□□ 2.47
SCARF1-207ENST00000573867 KCNG1Q9UIX4 513 aa30.45■■■□□ 2.47
SCARF1-207ENST00000573867 FAN1Q9Y2M0 1017 aa30.45■■■□□ 2.47
SCARF1-207ENST00000573867 TDRD15B5MCY1 1934 aaKnown RBP30.44■■■□□ 2.46
SCARF1-207ENST00000573867 H3BQ06 376 aaPredicted RBP30.44■■■□□ 2.46
SCARF1-207ENST00000573867 K7ENM7 598 aa30.44■■■□□ 2.46
SCARF1-207ENST00000573867 TRAK2O60296 914 aa30.44■■■□□ 2.46
SCARF1-207ENST00000573867 ALDH2P05091 517 aa30.44■■■□□ 2.46
SCARF1-207ENST00000573867 BMP1P13497 986 aa30.44■■■□□ 2.46
SCARF1-207ENST00000573867 NMT1P30419 496 aaKnown RBP30.44■■■□□ 2.46
SCARF1-207ENST00000573867 OR1G1P47890 313 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms