RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 ARID4BQ4LE39 1312 aaPredicted RBP6.33□□□□□ -1.4
CDC27-215ENST00000573550 NRP1O14786 923 aa6.33□□□□□ -1.4
CDC27-215ENST00000573550 LTA4HP09960 611 aaKnown RBP6.33□□□□□ -1.4
CDC27-215ENST00000573550 CDK11BP21127 795 aaKnown RBP6.33□□□□□ -1.4
CDC27-215ENST00000573550 WNT3AP56704 352 aa6.33□□□□□ -1.4
CDC27-215ENST00000573550 SRSF2Q01130 221 aaKnown RBP6.33□□□□□ -1.4
CDC27-215ENST00000573550 DDX10Q13206 875 aaKnown RBP6.33□□□□□ -1.4
CDC27-215ENST00000573550 PRKD1Q15139 912 aaPredicted RBP6.33□□□□□ -1.4
CDC27-215ENST00000573550 UBE3CQ15386 1083 aa6.33□□□□□ -1.4
CDC27-215ENST00000573550 MUM1Q2TAK8 710 aa6.33□□□□□ -1.4
CDC27-215ENST00000573550 SPTY2D1Q68D10 685 aaPredicted RBP6.33□□□□□ -1.4
CDC27-215ENST00000573550 ABHD15Q6UXT9 468 aa6.33□□□□□ -1.4
CDC27-215ENST00000573550 CNTD1Q8N815 330 aa6.33□□□□□ -1.4
CDC27-215ENST00000573550 TLR9Q9NR96 1032 aa6.33□□□□□ -1.4
CDC27-215ENST00000573550 NCDNQ9UBB6 729 aa6.33□□□□□ -1.4
CDC27-215ENST00000573550 HECAQ9UBI9 543 aaPredicted RBP6.33□□□□□ -1.4
CDC27-215ENST00000573550 ZNF608Q9ULD9 1512 aaPredicted RBP6.33□□□□□ -1.4
CDC27-215ENST00000573550 UHRF1BP1Q6BDS2 1440 aa6.33□□□□□ -1.4
CDC27-215ENST00000573550 LAMC1P11047 1609 aa6.32□□□□□ -1.4
CDC27-215ENST00000573550 PREX2Q70Z35 1606 aa6.32□□□□□ -1.4
CDC27-215ENST00000573550 KDM5CP41229 1560 aa6.32□□□□□ -1.4
CDC27-215ENST00000573550 MAST1Q9Y2H9 1570 aa6.32□□□□□ -1.4
CDC27-215ENST00000573550 GPATCH8Q9UKJ3 1502 aaKnown RBP6.32□□□□□ -1.4
CDC27-215ENST00000573550 CFBP00751 764 aa6.32□□□□□ -1.4
CDC27-215ENST00000573550 CTSSP25774 331 aa6.32□□□□□ -1.4
CDC27-215ENST00000573550 CDK17Q00537 523 aa6.32□□□□□ -1.4
CDC27-215ENST00000573550 TOR2AQ5JU69 321 aa6.32□□□□□ -1.4
CDC27-215ENST00000573550 CBARPQ8N350 705 aaPredicted RBP6.32□□□□□ -1.4
CDC27-215ENST00000573550 PRPF38AQ8NAV1 312 aaKnown RBP6.32□□□□□ -1.4
CDC27-215ENST00000573550 MENTQ9BUN1 341 aa6.32□□□□□ -1.4
CDC27-215ENST00000573550 SCOCQ9UIL1 159 aa6.32□□□□□ -1.4
CDC27-215ENST00000573550 MYRFQ9Y2G1 1151 aa6.32□□□□□ -1.4
CDC27-215ENST00000573550 ABCC10Q5T3U5 1492 aa6.32□□□□□ -1.4
CDC27-215ENST00000573550 RALGAPBQ86X10 1494 aa6.32□□□□□ -1.4
CDC27-215ENST00000573550 PTPRGP23470 1445 aa6.32□□□□□ -1.4
CDC27-215ENST00000573550 KIAA1107Q9UPP5 1409 aa6.32□□□□□ -1.4
CDC27-215ENST00000573550 CCDC7Q96M83 1385 aa6.31□□□□□ -1.4
CDC27-215ENST00000573550 E9PCH4 1651 aa6.31□□□□□ -1.4
CDC27-215ENST00000573550 CAPN14A8MX76 684 aa6.31□□□□□ -1.4
CDC27-215ENST00000573550 STC2O76061 302 aa6.31□□□□□ -1.4
CDC27-215ENST00000573550 MTHFD2P13995 350 aa6.31□□□□□ -1.4
CDC27-215ENST00000573550 INSRRP14616 1297 aa6.31□□□□□ -1.4
CDC27-215ENST00000573550 MTNR1BP49286 362 aa6.31□□□□□ -1.4
CDC27-215ENST00000573550 NPEPPSP55786 919 aa6.31□□□□□ -1.4
CDC27-215ENST00000573550 CCT2P78371 535 aaKnown RBP6.31□□□□□ -1.4
CDC27-215ENST00000573550 KLF1Q13351 362 aaPredicted RBP6.31□□□□□ -1.4
CDC27-215ENST00000573550 ADRM1Q16186 407 aa6.31□□□□□ -1.4
CDC27-215ENST00000573550 INAVAQ3KP66 663 aa6.31□□□□□ -1.4
CDC27-215ENST00000573550 FKBP15Q5T1M5 1219 aa6.31□□□□□ -1.4
CDC27-215ENST00000573550 LCE5AQ5TCM9 118 aa6.31□□□□□ -1.4
CDC27-215ENST00000573550 GGNQ86UU5 652 aa6.31□□□□□ -1.4
CDC27-215ENST00000573550 LILRA3Q8N6C8 439 aaPredicted RBP6.31□□□□□ -1.4
CDC27-215ENST00000573550 GLB1L3Q8NCI6 653 aaPredicted RBP6.31□□□□□ -1.4
CDC27-215ENST00000573550 SNX33Q8WV41 574 aa6.31□□□□□ -1.4
CDC27-215ENST00000573550 ZNF512Q96ME7 567 aaPredicted RBP6.31□□□□□ -1.4
CDC27-215ENST00000573550 IFT122Q9HBG6 1241 aa6.31□□□□□ -1.4
CDC27-215ENST00000573550 PCDH12Q9NPG4 1184 aa6.31□□□□□ -1.4
CDC27-215ENST00000573550 COL4A3BPQ9Y5P4 624 aa6.31□□□□□ -1.4
CDC27-215ENST00000573550 PLXNC1O60486 1568 aa6.31□□□□□ -1.4
CDC27-215ENST00000573550 ROCK2O75116 1388 aaKnown RBP6.31□□□□□ -1.4
CDC27-215ENST00000573550 WASHC2AQ641Q2 1341 aa6.3□□□□□ -1.4
CDC27-215ENST00000573550 PRAMEF4O60810 478 aa6.3□□□□□ -1.4
CDC27-215ENST00000573550 ACRV1P26436 265 aa6.3□□□□□ -1.4
CDC27-215ENST00000573550 CASRP41180 1078 aa6.3□□□□□ -1.4
CDC27-215ENST00000573550 HHEXQ03014 270 aa6.3□□□□□ -1.4
CDC27-215ENST00000573550 DUSP2Q05923 314 aa6.3□□□□□ -1.4
CDC27-215ENST00000573550 MTMR1Q13613 665 aa6.3□□□□□ -1.4
CDC27-215ENST00000573550 ELAVL1Q15717 326 aaKnown RBP6.3□□□□□ -1.4
CDC27-215ENST00000573550 ZXDCQ2QGD7 858 aaPredicted RBP6.3□□□□□ -1.4
CDC27-215ENST00000573550 C19orf54Q5BKX5 351 aa6.3□□□□□ -1.4
CDC27-215ENST00000573550 SPRED1Q7Z699 444 aa6.3□□□□□ -1.4
CDC27-215ENST00000573550 SGMS1Q86VZ5 419 aa6.3□□□□□ -1.4
CDC27-215ENST00000573550 SH3RF3Q8TEJ3 882 aaPredicted RBP6.3□□□□□ -1.4
CDC27-215ENST00000573550 ARL8AQ96BM9 186 aa6.3□□□□□ -1.4
CDC27-215ENST00000573550 BORCS6Q96GS4 357 aa6.3□□□□□ -1.4
CDC27-215ENST00000573550 PAWRQ96IZ0 340 aaKnown RBP6.3□□□□□ -1.4
CDC27-215ENST00000573550 DNAJC28Q9NX36 388 aa6.3□□□□□ -1.4
CDC27-215ENST00000573550 UNC13BO14795 1591 aa6.3□□□□□ -1.4
CDC27-215ENST00000573550 KTN1Q86UP2 1357 aaKnown RBP6.3□□□□□ -1.4
CDC27-215ENST00000573550 ANKRD30AQ9BXX3 1397 aa6.3□□□□□ -1.4
CDC27-215ENST00000573550 ZMYM4Q5VZL5 1548 aa6.3□□□□□ -1.4
CDC27-215ENST00000573550 SHROOM2Q13796 1616 aa6.29□□□□□ -1.4
CDC27-215ENST00000573550 TRIM75PA6NK02 468 aa6.29□□□□□ -1.4
CDC27-215ENST00000573550 MATN3O15232 486 aa6.29□□□□□ -1.4
CDC27-215ENST00000573550 GYPEP15421 78 aa6.29□□□□□ -1.4
CDC27-215ENST00000573550 TNFRSF1AP19438 455 aa6.29□□□□□ -1.4
CDC27-215ENST00000573550 HIBADHP31937 336 aaKnown RBP6.29□□□□□ -1.4
CDC27-215ENST00000573550 IARSP41252 1262 aaKnown RBP6.29□□□□□ -1.4
CDC27-215ENST00000573550 GUCY2FP51841 1108 aa6.29□□□□□ -1.4
CDC27-215ENST00000573550 MST1LQ2TV78 715 aa6.29□□□□□ -1.4
CDC27-215ENST00000573550 ANO4Q32M45 955 aa6.29□□□□□ -1.4
CDC27-215ENST00000573550 FAM214AQ32MH5 1076 aa6.29□□□□□ -1.4
CDC27-215ENST00000573550 MFSD5Q6N075 450 aa6.29□□□□□ -1.4
CDC27-215ENST00000573550 BTNL9Q6UXG8 535 aa6.29□□□□□ -1.4
CDC27-215ENST00000573550 FAM177A1Q8N128 213 aaPredicted RBP6.29□□□□□ -1.4
CDC27-215ENST00000573550 MIEF2Q96C03 454 aa6.29□□□□□ -1.4
CDC27-215ENST00000573550 GPATCH3Q96I76 525 aa6.29□□□□□ -1.4
CDC27-215ENST00000573550 RPTORQ8N122 1335 aa6.28□□□□□ -1.4
CDC27-215ENST00000573550 KRTAP23-1A1A580 65 aa6.28□□□□□ -1.4
CDC27-215ENST00000573550 PLSCR1O15162 318 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms