RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 N4BP3O15049 544 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 B4GALT5O43286 388 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 TSPAN1O60635 241 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 CUTAO60888 179 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 TBCAO75347 108 aaKnown RBP8.57□□□□□ -1.04
SMG6-211ENST00000572369 CSPG5O95196 566 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 ITGA4P13612 1032 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 ARF4P18085 180 aaPredicted RBP8.57□□□□□ -1.04
SMG6-211ENST00000572369 GUCY2CP25092 1073 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 DDIT3P35638 169 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 SLC12A3P55017 1021 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 KRT85P78386 507 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 FAM189BP81408 668 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 CACNB1Q02641 598 aaPredicted RBP8.57□□□□□ -1.04
SMG6-211ENST00000572369 RNASELQ05823 741 aaKnown RBP8.57□□□□□ -1.04
SMG6-211ENST00000572369 STRN3Q13033 797 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 PRPF4BQ13523 1007 aaKnown RBP8.57□□□□□ -1.04
SMG6-211ENST00000572369 PTPROQ16827 1216 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 TPRNQ4KMQ1 711 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 GLB1LQ6UWU2 654 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 CCDC73Q6ZRK6 1079 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 C1orf186Q6ZWK4 172 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 USP49Q70CQ1 688 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 SV2BQ7L1I2 683 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 CDR2LQ86X02 465 aaPredicted RBP8.57□□□□□ -1.04
SMG6-211ENST00000572369 RNF135Q8IUD6 432 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 LRRC43Q8N309 656 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 CNNM3Q8NE01 707 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 URGCPQ8TCY9 931 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 BSNDQ8WZ55 320 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 RAD54LQ92698 747 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 LPPQ93052 612 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 CCDC51Q96ER9 411 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 CHAMP1Q96JM3 812 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 SPATA32Q96LK8 384 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 PRIMPOLQ96LW4 560 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 C11orf84Q9BUA3 381 aaPredicted RBP8.57□□□□□ -1.04
SMG6-211ENST00000572369 KIFC3Q9BVG8 833 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 APOL6Q9BWW8 343 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 MRPL9Q9BYD2 267 aaKnown RBP8.57□□□□□ -1.04
SMG6-211ENST00000572369 C17orf75Q9HAS0 396 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 LMCD1Q9NZU5 365 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 LARSQ9P2J5 1176 aaKnown RBP8.57□□□□□ -1.04
SMG6-211ENST00000572369 STK17AQ9UEE5 414 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 KCNG1Q9UIX4 513 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 INPP5FQ9Y2H2 1132 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 RBM19Q9Y4C8 960 aaKnown RBP8.57□□□□□ -1.04
SMG6-211ENST00000572369 PCDHB2Q9Y5E7 798 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 PCDHB12Q9Y5F1 795 aa8.57□□□□□ -1.04
SMG6-211ENST00000572369 MRPL42Q9Y6G3 142 aaKnown RBP8.57□□□□□ -1.04
SMG6-211ENST00000572369 PHLPP2Q6ZVD8 1323 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 TCHHQ07283 1943 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 SPEGQ15772 3267 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 NPHP3-ACAD11A0A0J9YXS1 232 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 SLC16A4O15374 487 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 GALR2O43603 387 aaPredicted RBP8.56□□□□□ -1.04
SMG6-211ENST00000572369 NPTXRO95502 500 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 BRD1O95696 1058 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 RB1P06400 928 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 PLS3P13797 630 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 LAG3P18627 525 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 HOXA11P31270 313 aaPredicted RBP8.56□□□□□ -1.04
SMG6-211ENST00000572369 BMPR1AP36894 532 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 ANP32AP39687 249 aaKnown RBP8.56□□□□□ -1.04
SMG6-211ENST00000572369 MATR3P43243 847 aaKnown RBP eCLIP8.56□□□□□ -1.04
SMG6-211ENST00000572369 NPTX2P47972 431 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 NUCB2P80303 420 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 CDCA2Q69YH5 1023 aaPredicted RBP8.56□□□□□ -1.04
SMG6-211ENST00000572369 SLC27A1Q6PCB7 646 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 PPP4R3CPQ6ZMV5 832 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 DYMQ7RTS9 669 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 APBB1IPQ7Z5R6 666 aaPredicted RBP8.56□□□□□ -1.04
SMG6-211ENST00000572369 THNSL1Q8IYQ7 743 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 CRIPAKQ8N1N5 446 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 MYCT1Q8N699 235 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 BICD1Q96G01 975 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 CASD1Q96PB1 797 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 FAM193BQ96PV7 902 aaPredicted RBP8.56□□□□□ -1.04
SMG6-211ENST00000572369 REEP2Q9BRK0 252 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 TCHPQ9BT92 498 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 TRAIPQ9BWF2 469 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 EIF2AQ9BY44 585 aaKnown RBP8.56□□□□□ -1.04
SMG6-211ENST00000572369 GBP3Q9H0R5 595 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 RSAD1Q9HA92 442 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 RC3H2Q9HBD1 1191 aaKnown RBP8.56□□□□□ -1.04
SMG6-211ENST00000572369 TYW1Q9NV66 732 aaKnown RBP8.56□□□□□ -1.04
SMG6-211ENST00000572369 FAM13BQ9NYF5 915 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 PARP2Q9UGN5 583 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 ODF2LQ9ULJ1 636 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 IPPQ9Y573 584 aa8.56□□□□□ -1.04
SMG6-211ENST00000572369 MORC2Q9Y6X9 1032 aaPredicted RBP8.56□□□□□ -1.04
SMG6-211ENST00000572369 CNTNAP2Q9UHC6 1331 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 PLXNA4Q9HCM2 1894 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 H0YCG3 227 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 H3BNC9 293 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 H3BQ06 376 aaPredicted RBP8.55□□□□□ -1.04
SMG6-211ENST00000572369 K7ENM7 598 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 ACKR2O00590 384 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 ZNF623O75123 536 aa8.55□□□□□ -1.04
SMG6-211ENST00000572369 ZC3H11AO75152 810 aaKnown RBP eCLIP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms