RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 CASP5P51878 434 aa13.07□□□□□ -0.32
TRIM25-205ENST00000572021 ERVK-21P61565 698 aa13.07□□□□□ -0.32
TRIM25-205ENST00000572021 COASYQ13057 564 aa13.07□□□□□ -0.32
TRIM25-205ENST00000572021 EPC2Q52LR7 807 aa13.07□□□□□ -0.32
TRIM25-205ENST00000572021 SPOUT1Q5T280 376 aaKnown RBP13.07□□□□□ -0.32
TRIM25-205ENST00000572021 FAM43BQ6ZT52 329 aaPredicted RBP13.07□□□□□ -0.32
TRIM25-205ENST00000572021 TMEM192Q8IY95 271 aa13.07□□□□□ -0.32
TRIM25-205ENST00000572021 GLIS3Q8NEA6 775 aa13.07□□□□□ -0.32
TRIM25-205ENST00000572021 BICD1Q96G01 975 aa13.07□□□□□ -0.32
TRIM25-205ENST00000572021 ZFP42Q96MM3 310 aa13.07□□□□□ -0.32
TRIM25-205ENST00000572021 MRPL4Q9BYD3 311 aaKnown RBP13.07□□□□□ -0.32
TRIM25-205ENST00000572021 TMEM117Q9H0C3 514 aa13.07□□□□□ -0.32
TRIM25-205ENST00000572021 GBP3Q9H0R5 595 aa13.07□□□□□ -0.32
TRIM25-205ENST00000572021 CXCL16Q9H2A7 254 aa13.07□□□□□ -0.32
TRIM25-205ENST00000572021 MRPL44Q9H9J2 332 aaKnown RBP13.07□□□□□ -0.32
TRIM25-205ENST00000572021 RNF216Q9NWF9 866 aaPredicted RBP13.07□□□□□ -0.32
TRIM25-205ENST00000572021 ANKFY1Q9P2R3 1169 aa13.07□□□□□ -0.32
TRIM25-205ENST00000572021 PARP2Q9UGN5 583 aa13.07□□□□□ -0.32
TRIM25-205ENST00000572021 TBX20Q9UMR3 447 aa13.07□□□□□ -0.32
TRIM25-205ENST00000572021 GDAQ9Y2T3 454 aa13.07□□□□□ -0.32
TRIM25-205ENST00000572021 RALGAPA2Q2PPJ7 1873 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 FAM237AA0A1B0GTK4 181 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 FRMD3A2A2Y4 597 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 TISP43B9A030 160 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 PRR29P0C7W0 189 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 MYBP10242 640 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 GAP43P17677 238 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 MLH1P40692 756 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 OSTNP61366 133 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 AMPD3Q01432 767 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 KCNA1Q09470 495 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 ADGRE1Q14246 886 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 ZNF568Q3ZCX4 644 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 SEZ6Q53EL9 994 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 GLB1LQ6UWU2 654 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 CCDC65Q8IXS2 484 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 CEP120Q8N960 986 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 FBXO22Q8NEZ5 403 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 PGBD4Q96DM1 585 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 GAD1Q99259 594 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 C7orf25Q9BPX7 421 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 ADPGKQ9BRR6 497 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 TCHPQ9BT92 498 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 CDT1Q9H211 546 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 TSPY26PQ9H489 355 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 CWH43Q9H720 699 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 RSAD1Q9HA92 442 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 SNTG2Q9NY99 539 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 TNFSF13BQ9Y275 285 aa13.06□□□□□ -0.32
TRIM25-205ENST00000572021 COL6A3P12111 3177 aa13.05□□□□□ -0.32
TRIM25-205ENST00000572021 ARL5CA6NH57 179 aa13.05□□□□□ -0.32
TRIM25-205ENST00000572021 ABLIM1O14639 778 aa13.05□□□□□ -0.32
TRIM25-205ENST00000572021 HOXA2O43364 376 aa13.05□□□□□ -0.32
TRIM25-205ENST00000572021 B4GALT3O60512 393 aa13.05□□□□□ -0.32
TRIM25-205ENST00000572021 ZNF202O95125 648 aa13.05□□□□□ -0.32
TRIM25-205ENST00000572021 GCNT3O95395 438 aa13.05□□□□□ -0.32
TRIM25-205ENST00000572021 POMCP01189 267 aa13.05□□□□□ -0.32
TRIM25-205ENST00000572021 IGFBP4P22692 258 aa13.05□□□□□ -0.32
TRIM25-205ENST00000572021 MATR3P43243 847 aaKnown RBP eCLIP13.05□□□□□ -0.325e-7■■□□□ 14.4
TRIM25-205ENST00000572021 NOMO2Q5JPE7 1267 aa13.05□□□□□ -0.32
TRIM25-205ENST00000572021 ZNF720Q7Z2F6 126 aa13.05□□□□□ -0.32
TRIM25-205ENST00000572021 CLP1Q92989 425 aaKnown RBP13.05□□□□□ -0.32
TRIM25-205ENST00000572021 PYM1Q9BRP8 204 aaKnown RBP13.05□□□□□ -0.32
TRIM25-205ENST00000572021 LRRC27Q9C0I9 530 aa13.05□□□□□ -0.32
TRIM25-205ENST00000572021 HAPLN2Q9GZV7 340 aa13.05□□□□□ -0.32
TRIM25-205ENST00000572021 RBSNQ9H1K0 784 aa13.05□□□□□ -0.32
TRIM25-205ENST00000572021 MAGEF1Q9HAY2 307 aa13.05□□□□□ -0.32
TRIM25-205ENST00000572021 PTPRHQ9HD43 1115 aa13.05□□□□□ -0.32
TRIM25-205ENST00000572021 TBC1D13Q9NVG8 400 aa13.05□□□□□ -0.32
TRIM25-205ENST00000572021 MIOSQ9NXC5 875 aa13.05□□□□□ -0.32
TRIM25-205ENST00000572021 KCNG1Q9UIX4 513 aa13.05□□□□□ -0.32
TRIM25-205ENST00000572021 ANKRD63C9JTQ0 380 aa13.04□□□□□ -0.32
TRIM25-205ENST00000572021 H0YCG3 227 aa13.04□□□□□ -0.32
TRIM25-205ENST00000572021 HNRNPDLO14979 420 aaKnown RBP13.04□□□□□ -0.32
TRIM25-205ENST00000572021 BMPR1AP36894 532 aa13.04□□□□□ -0.32
TRIM25-205ENST00000572021 LIG4P49917 911 aa13.04□□□□□ -0.32
TRIM25-205ENST00000572021 SCNN1GP51170 649 aa13.04□□□□□ -0.32
TRIM25-205ENST00000572021 GTF2BQ00403 316 aa13.04□□□□□ -0.32
TRIM25-205ENST00000572021 RNASELQ05823 741 aaKnown RBP13.04□□□□□ -0.32
TRIM25-205ENST00000572021 CCDC173Q0VFZ6 552 aa13.04□□□□□ -0.32
TRIM25-205ENST00000572021 SLC39A4Q6P5W5 647 aa13.04□□□□□ -0.32
TRIM25-205ENST00000572021 MPZL3Q6UWV2 235 aa13.04□□□□□ -0.32
TRIM25-205ENST00000572021 KRBA2Q6ZNG9 492 aa13.04□□□□□ -0.32
TRIM25-205ENST00000572021 ZNF280BQ86YH2 543 aa13.04□□□□□ -0.32
TRIM25-205ENST00000572021 THNSL1Q8IYQ7 743 aa13.04□□□□□ -0.32
TRIM25-205ENST00000572021 FMR1NBQ8N0W7 255 aaPredicted RBP13.04□□□□□ -0.32
TRIM25-205ENST00000572021 LRRC43Q8N309 656 aa13.04□□□□□ -0.32
TRIM25-205ENST00000572021 CNNM3Q8NE01 707 aa13.04□□□□□ -0.32
TRIM25-205ENST00000572021 ANP32BQ92688 251 aaKnown RBP13.04□□□□□ -0.32
TRIM25-205ENST00000572021 SEL1LQ9UBV2 794 aa13.04□□□□□ -0.32
TRIM25-205ENST00000572021 DNAJB4Q9UDY4 337 aa13.04□□□□□ -0.32
TRIM25-205ENST00000572021 PLXNA4Q9HCM2 1894 aa13.04□□□□□ -0.32
TRIM25-205ENST00000572021 TDRD15B5MCY1 1934 aaKnown RBP13.04□□□□□ -0.32
TRIM25-205ENST00000572021 TRIP11Q15643 1979 aa13.04□□□□□ -0.32
TRIM25-205ENST00000572021 NT5C1B-RDH14C9J2C7 533 aa13.03□□□□□ -0.32
TRIM25-205ENST00000572021 LPXNO60711 386 aa13.03□□□□□ -0.32
TRIM25-205ENST00000572021 ZC3H11AO75152 810 aaKnown RBP eCLIP13.03□□□□□ -0.32
TRIM25-205ENST00000572021 PPP1R37O75864 691 aa13.03□□□□□ -0.32
TRIM25-205ENST00000572021 RECQL4O94761 1208 aa13.03□□□□□ -0.32
TRIM25-205ENST00000572021 DDHD2O94830 711 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms