RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 SKIP12755 728 aa12.99□□□□□ -0.33
CDRT1-206ENST00000571263 ARF4P18085 180 aaPredicted RBP12.99□□□□□ -0.33
CDRT1-206ENST00000571263 GTF2H1P32780 548 aa12.99□□□□□ -0.33
CDRT1-206ENST00000571263 ZNF75DP51815 510 aa12.99□□□□□ -0.33
CDRT1-206ENST00000571263 AP3M2P53677 418 aa12.99□□□□□ -0.33
CDRT1-206ENST00000571263 CCDC173Q0VFZ6 552 aa12.99□□□□□ -0.33
CDRT1-206ENST00000571263 CETN1Q12798 172 aa12.99□□□□□ -0.33
CDRT1-206ENST00000571263 BFSP1Q12934 665 aa12.99□□□□□ -0.33
CDRT1-206ENST00000571263 TRIM71Q2Q1W2 868 aaKnown RBP12.99□□□□□ -0.33
CDRT1-206ENST00000571263 ZNF568Q3ZCX4 644 aa12.99□□□□□ -0.33
CDRT1-206ENST00000571263 SLC27A1Q6PCB7 646 aa12.99□□□□□ -0.33
CDRT1-206ENST00000571263 CD302Q8IX05 232 aa12.99□□□□□ -0.33
CDRT1-206ENST00000571263 HACE1Q8IYU2 909 aa12.99□□□□□ -0.33
CDRT1-206ENST00000571263 PPP1R13LQ8WUF5 828 aa12.99□□□□□ -0.33
CDRT1-206ENST00000571263 BORCS6Q96GS4 357 aa12.99□□□□□ -0.33
CDRT1-206ENST00000571263 TSPAN18Q96SJ8 248 aa12.99□□□□□ -0.33
CDRT1-206ENST00000571263 XPO4Q9C0E2 1151 aaKnown RBP12.99□□□□□ -0.33
CDRT1-206ENST00000571263 TRPV6Q9H1D0 765 aa12.99□□□□□ -0.33
CDRT1-206ENST00000571263 NDST4Q9H3R1 872 aa12.99□□□□□ -0.33
CDRT1-206ENST00000571263 PCIF1Q9H4Z3 704 aa12.99□□□□□ -0.33
CDRT1-206ENST00000571263 RTN4Q9NQC3 1192 aaKnown RBP12.99□□□□□ -0.33
CDRT1-206ENST00000571263 ANKFY1Q9P2R3 1169 aa12.99□□□□□ -0.33
CDRT1-206ENST00000571263 A0A1W2PQC6 194 aa12.98□□□□□ -0.33
CDRT1-206ENST00000571263 LGALS16A8MUM7 142 aa12.98□□□□□ -0.33
CDRT1-206ENST00000571263 IQCF3P0C7M6 154 aa12.98□□□□□ -0.33
CDRT1-206ENST00000571263 CKBP12277 381 aa12.98□□□□□ -0.33
CDRT1-206ENST00000571263 SELPP16109 830 aa12.98□□□□□ -0.33
CDRT1-206ENST00000571263 ZSCAN20P17040 1043 aaPredicted RBP12.98□□□□□ -0.33
CDRT1-206ENST00000571263 CASP4P49662 377 aa12.98□□□□□ -0.33
CDRT1-206ENST00000571263 MNX1P50219 401 aaPredicted RBP12.98□□□□□ -0.33
CDRT1-206ENST00000571263 VAMP7P51809 220 aa12.98□□□□□ -0.33
CDRT1-206ENST00000571263 HSP90AA4PQ58FG1 418 aa12.98□□□□□ -0.33
CDRT1-206ENST00000571263 FBXO47Q5MNV8 452 aa12.98□□□□□ -0.33
CDRT1-206ENST00000571263 APTXQ7Z2E3 356 aaKnown RBP12.98□□□□□ -0.33
CDRT1-206ENST00000571263 ZNF668Q96K58 619 aaPredicted RBP12.98□□□□□ -0.33
CDRT1-206ENST00000571263 PPP1R16BQ96T49 567 aa12.98□□□□□ -0.33
CDRT1-206ENST00000571263 NUP58Q9BVL2 599 aa12.98□□□□□ -0.33
CDRT1-206ENST00000571263 VPS16Q9H269 839 aa12.98□□□□□ -0.33
CDRT1-206ENST00000571263 CDHR5Q9HBB8 845 aa12.98□□□□□ -0.33
CDRT1-206ENST00000571263 RNF216Q9NWF9 866 aaPredicted RBP12.98□□□□□ -0.33
CDRT1-206ENST00000571263 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.98□□□□□ -0.33
CDRT1-206ENST00000571263 GTPBP10A4D1E9 387 aaKnown RBP12.97□□□□□ -0.33
CDRT1-206ENST00000571263 PES1O00541 588 aaKnown RBP12.97□□□□□ -0.33
CDRT1-206ENST00000571263 ABLIM1O14639 778 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 PMM2O15305 246 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 IL18RAPO95256 599 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 AFPP02771 609 aaKnown RBP12.97□□□□□ -0.33
CDRT1-206ENST00000571263 CLTAP09496 248 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 UBXN1Q04323 297 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 KCNH2Q12809 1159 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 PAK2Q13177 524 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 PSMD6Q15008 389 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 ZNF618Q5T7W0 954 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 TCERG1LQ5VWI1 586 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 NT5DC4Q86YG4 428 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 RDH13Q8NBN7 331 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 DHX38Q92620 1227 aaKnown RBP12.97□□□□□ -0.33
CDRT1-206ENST00000571263 EEF2KMTQ96G04 330 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 ZBTB45Q96K62 511 aaPredicted RBP12.97□□□□□ -0.33
CDRT1-206ENST00000571263 NAP1L5Q96NT1 182 aaPredicted RBP12.97□□□□□ -0.33
CDRT1-206ENST00000571263 FNBP1Q96RU3 617 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 FAM213AQ9BRX8 229 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 CCDC94Q9BW85 323 aaPredicted RBP12.97□□□□□ -0.33
CDRT1-206ENST00000571263 TRAIPQ9BWF2 469 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 FTHL17Q9BXU8 183 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 TRIM6Q9C030 488 aaPredicted RBP12.97□□□□□ -0.33
CDRT1-206ENST00000571263 CDT1Q9H211 546 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 PDZD7Q9H5P4 517 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 PLEKHA5Q9HAU0 1116 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 TAB2Q9NYJ8 693 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 IMPACTQ9P2X3 320 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 CPSF3Q9UKF6 684 aaKnown RBP12.97□□□□□ -0.33
CDRT1-206ENST00000571263 ST3GAL5Q9UNP4 418 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 NOC2LQ9Y3T9 749 aaKnown RBP12.97□□□□□ -0.33
CDRT1-206ENST00000571263 DAAM1Q9Y4D1 1078 aa12.97□□□□□ -0.33
CDRT1-206ENST00000571263 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDRT1-206ENST00000571263 ITIH6Q6UXX5 1313 aa12.96□□□□□ -0.33
CDRT1-206ENST00000571263 TISP43B9A030 160 aa12.96□□□□□ -0.33
CDRT1-206ENST00000571263 B4GALT5O43286 388 aa12.96□□□□□ -0.33
CDRT1-206ENST00000571263 TPM1P09493 284 aa12.96□□□□□ -0.33
CDRT1-206ENST00000571263 CTSHP09668 335 aa12.96□□□□□ -0.33
CDRT1-206ENST00000571263 HOXA11P31270 313 aaPredicted RBP12.96□□□□□ -0.33
CDRT1-206ENST00000571263 GRM5P41594 1212 aa12.96□□□□□ -0.33
CDRT1-206ENST00000571263 RAB27AP51159 221 aa12.96□□□□□ -0.33
CDRT1-206ENST00000571263 YARSP54577 528 aaKnown RBP12.96□□□□□ -0.33
CDRT1-206ENST00000571263 CLDN10P78369 228 aa12.96□□□□□ -0.33
CDRT1-206ENST00000571263 CYP24A1Q07973 514 aa12.96□□□□□ -0.33
CDRT1-206ENST00000571263 TRIM14Q14142 442 aa12.96□□□□□ -0.33
CDRT1-206ENST00000571263 MIIPQ5JXC2 388 aa12.96□□□□□ -0.33
CDRT1-206ENST00000571263 LRRC8DQ7L1W4 858 aa12.96□□□□□ -0.33
CDRT1-206ENST00000571263 ZBTB33Q86T24 672 aa12.96□□□□□ -0.33
CDRT1-206ENST00000571263 FAM228AQ86W67 206 aa12.96□□□□□ -0.33
CDRT1-206ENST00000571263 CBWD2Q8IUF1 395 aa12.96□□□□□ -0.33
CDRT1-206ENST00000571263 BRSK2Q8IWQ3 736 aa12.96□□□□□ -0.33
CDRT1-206ENST00000571263 DRC7Q8IY82 874 aa12.96□□□□□ -0.33
CDRT1-206ENST00000571263 PARD3BQ8TEW8 1205 aa12.96□□□□□ -0.33
CDRT1-206ENST00000571263 TMEM40Q8WWA1 233 aa12.96□□□□□ -0.33
CDRT1-206ENST00000571263 APBB2Q92870 758 aa12.96□□□□□ -0.33
CDRT1-206ENST00000571263 WNT8BQ93098 351 aa12.96□□□□□ -0.33
CDRT1-206ENST00000571263 SLC35C1Q96A29 364 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms