RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 STARD13Q9Y3M8 1113 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 STK24Q9Y6E0 443 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 USH1CQ9Y6N9 552 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 ARFGEF1Q9Y6D6 1849 aa16.51■□□□□ 0.23
SMG6-207ENST00000570756 DDX60LQ5H9U9 1706 aaKnown RBP16.5■□□□□ 0.23
SMG6-207ENST00000570756 GPC5P78333 572 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 PABPC4Q13310 644 aaKnown RBP eCLIP16.5■□□□□ 0.23
SMG6-207ENST00000570756 CTTNQ14247 550 aaKnown RBP16.5■□□□□ 0.23
SMG6-207ENST00000570756 CNBD1Q8NA66 436 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 ASAP3Q8TDY4 903 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 SLCO2A1Q92959 643 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 MKNK1Q9BUB5 465 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 GPR88Q9GZN0 384 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 GLT8D2Q9H1C3 349 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 LGALS13Q9UHV8 139 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 CDH16O75309 829 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 TAC1P20366 129 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 COMTP21964 271 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 CAV1Q03135 178 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 MPP2Q14168 576 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 PDCD2Q16342 344 aaPredicted RBP16.5■□□□□ 0.23
SMG6-207ENST00000570756 MAEAQ7L5Y9 396 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 CATSPER3Q86XQ3 398 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 ANKRD35Q8N283 1001 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 FAM13CQ8NE31 585 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 CFAP61Q8NHU2 1237 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 ZFAND2BQ8WV99 257 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 TEKT4Q8WW24 435 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 DNAJC9Q8WXX5 260 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 CCDC77Q9BR77 488 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 LRRC19Q9H756 370 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 AAASQ9NRG9 546 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 MYO3BQ8WXR4 1341 aa16.5■□□□□ 0.23
SMG6-207ENST00000570756 THAP12O43422 761 aa16.49■□□□□ 0.23
SMG6-207ENST00000570756 PYGMP11217 842 aa16.49■□□□□ 0.23
SMG6-207ENST00000570756 STAT3P40763 770 aa16.49■□□□□ 0.23
SMG6-207ENST00000570756 GCLCP48506 637 aaPredicted RBP16.49■□□□□ 0.23
SMG6-207ENST00000570756 NFIL3Q16649 462 aa16.49■□□□□ 0.23
SMG6-207ENST00000570756 RNF207Q6ZRF8 634 aa16.49■□□□□ 0.23
SMG6-207ENST00000570756 GALNT15Q8N3T1 639 aa16.49■□□□□ 0.23
SMG6-207ENST00000570756 SLC17A8Q8NDX2 589 aa16.49■□□□□ 0.23
SMG6-207ENST00000570756 NLRP3Q96P20 1036 aa16.49■□□□□ 0.23
SMG6-207ENST00000570756 PLVAPQ9BX97 442 aa16.49■□□□□ 0.23
SMG6-207ENST00000570756 INTS2Q9H0H0 1204 aaKnown RBP16.49■□□□□ 0.23
SMG6-207ENST00000570756 GPCPD1Q9NPB8 672 aa16.49■□□□□ 0.23
SMG6-207ENST00000570756 ZMYND8Q9ULU4 1186 aaPredicted RBP16.49■□□□□ 0.23
SMG6-207ENST00000570756 TNRC6CQ9HCJ0 1690 aaKnown RBP16.49■□□□□ 0.23
SMG6-207ENST00000570756 EIF4E1BA6NMX2 242 aaKnown RBP16.49■□□□□ 0.23
SMG6-207ENST00000570756 FTLP02792 175 aaPredicted RBP16.49■□□□□ 0.23
SMG6-207ENST00000570756 PDHA1P08559 390 aa16.49■□□□□ 0.23
SMG6-207ENST00000570756 RPA1P27694 616 aa16.49■□□□□ 0.23
SMG6-207ENST00000570756 MESDQ14696 234 aa16.49■□□□□ 0.23
SMG6-207ENST00000570756 PALB2Q86YC2 1186 aa16.49■□□□□ 0.23
SMG6-207ENST00000570756 SNF8Q96H20 258 aa16.49■□□□□ 0.23
SMG6-207ENST00000570756 JMJD4Q9H9V9 463 aa16.49■□□□□ 0.23
SMG6-207ENST00000570756 ASIC3Q9UHC3 531 aa16.49■□□□□ 0.23
SMG6-207ENST00000570756 GPR75-ASB3A0A0A6YYF3 556 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 EIF3DO15371 548 aaKnown RBP eCLIP16.48■□□□□ 0.23
SMG6-207ENST00000570756 SNHG28P0DPA3 235 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 BCRP11274 1271 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 GAP43P17677 238 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 TARSP26639 723 aaKnown RBP16.48■□□□□ 0.23
SMG6-207ENST00000570756 KCNJ1P48048 391 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 PTDSS1P48651 473 aaKnown RBP16.48■□□□□ 0.23
SMG6-207ENST00000570756 RPS6KA3P51812 740 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 KRT17Q04695 432 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 MUM1Q2TAK8 710 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 SYDE1Q6ZW31 735 aaPredicted RBP16.48■□□□□ 0.23
SMG6-207ENST00000570756 SRRM1Q8IYB3 904 aaKnown RBP16.48■□□□□ 0.23
SMG6-207ENST00000570756 ADGRF4Q8IZF3 695 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 VTI1AQ96AJ9 217 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 CRAMP1Q96RY5 1269 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 OLFML3Q9NRN5 406 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 HAO1Q9UJM8 370 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 ATF5Q9Y2D1 282 aaPredicted RBP16.48■□□□□ 0.23
SMG6-207ENST00000570756 ASB3Q9Y575 518 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 SPOPO43791 374 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 RTN3O95197 1032 aaPredicted RBP16.48■□□□□ 0.23
SMG6-207ENST00000570756 MAN1A1P33908 653 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 ARHGAP44Q17R89 818 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 SPDYAQ5MJ70 313 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 TMEM154Q6P9G4 183 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 RHBDF2Q6PJF5 856 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 FAM47EQ6ZV65 393 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 TXNRD3Q86VQ6 643 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 LONP2Q86WA8 852 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 RBBP8NLQ8NC74 664 aaPredicted RBP16.48■□□□□ 0.23
SMG6-207ENST00000570756 UIMC1Q96RL1 719 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 DCLRE1BQ9H816 532 aa16.48■□□□□ 0.23
SMG6-207ENST00000570756 CYP3A7-CYP3A51PA0A087WV96 503 aa16.47■□□□□ 0.23
SMG6-207ENST00000570756 TCRBV7S2A1N4TA0A589 114 aa16.47■□□□□ 0.23
SMG6-207ENST00000570756 FAM47DPA6NHR8 397 aa16.47■□□□□ 0.23
SMG6-207ENST00000570756 MAGEB2O15479 319 aa16.47■□□□□ 0.23
SMG6-207ENST00000570756 TGFB1I1O43294 461 aa16.47■□□□□ 0.23
SMG6-207ENST00000570756 MTA2O94776 668 aa16.47■□□□□ 0.23
SMG6-207ENST00000570756 CYP3A7P24462 503 aa16.47■□□□□ 0.23
SMG6-207ENST00000570756 PSMC6P62333 389 aa16.47■□□□□ 0.23
SMG6-207ENST00000570756 MYL7Q01449 175 aa16.47■□□□□ 0.23
SMG6-207ENST00000570756 SIX1Q15475 284 aaPredicted RBP16.47■□□□□ 0.23
SMG6-207ENST00000570756 SLC10A5Q5PT55 438 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms