RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 TRIM29Q14134 588 aa16.4■□□□□ 0.22
NDE1-203ENST00000570727 C15orf39Q6ZRI6 1047 aa16.4■□□□□ 0.22
NDE1-203ENST00000570727 GPR62Q9BZJ7 368 aa16.4■□□□□ 0.22
NDE1-203ENST00000570727 CHST7Q9NS84 486 aa16.4■□□□□ 0.22
NDE1-203ENST00000570727 SSX2IPQ9Y2D8 614 aa16.4■□□□□ 0.22
NDE1-203ENST00000570727 USO1O60763 962 aaKnown RBP16.39■□□□□ 0.21
NDE1-203ENST00000570727 MED24O75448 989 aa16.39■□□□□ 0.21
NDE1-203ENST00000570727 NPTXRO95502 500 aa16.39■□□□□ 0.21
NDE1-203ENST00000570727 URODP06132 367 aa16.39■□□□□ 0.21
NDE1-203ENST00000570727 ATP2B1P20020 1258 aa16.39■□□□□ 0.21
NDE1-203ENST00000570727 MCM7P33993 719 aa16.39■□□□□ 0.21
NDE1-203ENST00000570727 GLUD2P49448 558 aa16.39■□□□□ 0.21
NDE1-203ENST00000570727 GUCY1B3Q02153 619 aa16.39■□□□□ 0.21
NDE1-203ENST00000570727 DSG1Q02413 1049 aa16.39■□□□□ 0.21
NDE1-203ENST00000570727 SLC27A1Q6PCB7 646 aa16.39■□□□□ 0.21
NDE1-203ENST00000570727 MAEAQ7L5Y9 396 aa16.39■□□□□ 0.21
NDE1-203ENST00000570727 CMASQ8NFW8 434 aaPredicted RBP16.39■□□□□ 0.21
NDE1-203ENST00000570727 COLEC11Q9BWP8 271 aa16.39■□□□□ 0.21
NDE1-203ENST00000570727 TRIM6Q9C030 488 aaPredicted RBP16.39■□□□□ 0.21
NDE1-203ENST00000570727 TUFT1Q9NNX1 390 aa16.39■□□□□ 0.21
NDE1-203ENST00000570727 MAN1C1Q9NR34 630 aa16.39■□□□□ 0.21
NDE1-203ENST00000570727 KLK14Q9P0G3 267 aa16.39■□□□□ 0.21
NDE1-203ENST00000570727 ZFHX2Q9C0A1 2572 aaPredicted RBP16.39■□□□□ 0.21
NDE1-203ENST00000570727 CCDC195A0A1B0GUA6 201 aa16.38■□□□□ 0.21
NDE1-203ENST00000570727 SPDYE4A6NLX3 237 aa16.38■□□□□ 0.21
NDE1-203ENST00000570727 TTLL13PA6NNM8 815 aa16.38■□□□□ 0.21
NDE1-203ENST00000570727 N4BP1O75113 896 aaKnown RBP16.38■□□□□ 0.21
NDE1-203ENST00000570727 ADH1AP07327 375 aa16.38■□□□□ 0.21
NDE1-203ENST00000570727 MYBP10242 640 aa16.38■□□□□ 0.21
NDE1-203ENST00000570727 NUBP1P53384 320 aa16.38■□□□□ 0.21
NDE1-203ENST00000570727 PPP4R3CPQ6ZMV5 832 aa16.38■□□□□ 0.21
NDE1-203ENST00000570727 CCDC149Q6ZUS6 474 aa16.38■□□□□ 0.21
NDE1-203ENST00000570727 OTOP3Q7RTS5 596 aa16.38■□□□□ 0.21
NDE1-203ENST00000570727 TMEM105Q8N8V8 129 aa16.38■□□□□ 0.21
NDE1-203ENST00000570727 RABGGTAQ92696 567 aa16.38■□□□□ 0.21
NDE1-203ENST00000570727 ACSF2Q96CM8 615 aaPredicted RBP16.38■□□□□ 0.21
NDE1-203ENST00000570727 B3GALT6Q96L58 329 aa16.38■□□□□ 0.21
NDE1-203ENST00000570727 CCDC43Q96MW1 224 aaKnown RBP16.38■□□□□ 0.21
NDE1-203ENST00000570727 POLR3CQ9BUI4 534 aaPredicted RBP16.38■□□□□ 0.21
NDE1-203ENST00000570727 FZD8Q9H461 694 aa16.38■□□□□ 0.21
NDE1-203ENST00000570727 FAM86C1Q9NVL1 165 aa16.38■□□□□ 0.21
NDE1-203ENST00000570727 DOCK6Q96HP0 2047 aa16.38■□□□□ 0.21
NDE1-203ENST00000570727 DOCK8Q8NF50 2099 aa16.38■□□□□ 0.21
NDE1-203ENST00000570727 LRRIQ4A6NIV6 560 aa16.37■□□□□ 0.21
NDE1-203ENST00000570727 H0Y858 1186 aa16.37■□□□□ 0.21
NDE1-203ENST00000570727 NR1I2O75469 434 aa16.37■□□□□ 0.21
NDE1-203ENST00000570727 PAPLNO95428 1278 aa16.37■□□□□ 0.21
NDE1-203ENST00000570727 SPATA31D3P0C874 917 aa16.37■□□□□ 0.21
NDE1-203ENST00000570727 FAM187BQ17R55 369 aa16.37■□□□□ 0.21
NDE1-203ENST00000570727 CDCA2Q69YH5 1023 aaPredicted RBP16.37■□□□□ 0.21
NDE1-203ENST00000570727 FUT10Q6P4F1 479 aa16.37■□□□□ 0.21
NDE1-203ENST00000570727 LILRA6Q6PI73 481 aa16.37■□□□□ 0.21
NDE1-203ENST00000570727 SPATA31D4Q6ZUB0 917 aa16.37■□□□□ 0.21
NDE1-203ENST00000570727 HACE1Q8IYU2 909 aa16.37■□□□□ 0.21
NDE1-203ENST00000570727 BSNDQ8WZ55 320 aa16.37■□□□□ 0.21
NDE1-203ENST00000570727 NACC1Q96RE7 527 aa16.37■□□□□ 0.21
NDE1-203ENST00000570727 RHOBTB2Q9BYZ6 727 aa16.37■□□□□ 0.21
NDE1-203ENST00000570727 KCNK12Q9HB15 430 aa16.37■□□□□ 0.21
NDE1-203ENST00000570727 CACNG4Q9UBN1 327 aa16.37■□□□□ 0.21
NDE1-203ENST00000570727 PARP2Q9UGN5 583 aa16.37■□□□□ 0.21
NDE1-203ENST00000570727 WDR87Q6ZQQ6 2873 aa16.36■□□□□ 0.21
NDE1-203ENST00000570727 GALR2O43603 387 aaPredicted RBP16.36■□□□□ 0.21
NDE1-203ENST00000570727 RFPL2O75678 378 aa16.36■□□□□ 0.21
NDE1-203ENST00000570727 GLUD1P00367 558 aa16.36■□□□□ 0.21
NDE1-203ENST00000570727 C1RP00736 705 aa16.36■□□□□ 0.21
NDE1-203ENST00000570727 RPA1P27694 616 aa16.36■□□□□ 0.21
NDE1-203ENST00000570727 TDGQ13569 410 aa16.36■□□□□ 0.21
NDE1-203ENST00000570727 ZNF174Q15697 407 aa16.36■□□□□ 0.21
NDE1-203ENST00000570727 USP41Q3LFD5 358 aa16.36■□□□□ 0.21
NDE1-203ENST00000570727 ASTLQ6HA08 431 aaPredicted RBP16.36■□□□□ 0.21
NDE1-203ENST00000570727 CYP26C1Q6V0L0 522 aa16.36■□□□□ 0.21
NDE1-203ENST00000570727 PALB2Q86YC2 1186 aa16.36■□□□□ 0.21
NDE1-203ENST00000570727 GPR65Q8IYL9 337 aa16.36■□□□□ 0.21
NDE1-203ENST00000570727 MCPH1Q8NEM0 835 aa16.36■□□□□ 0.21
NDE1-203ENST00000570727 HDAC7Q8WUI4 952 aa16.36■□□□□ 0.21
NDE1-203ENST00000570727 ZNF707Q96C28 371 aaPredicted RBP16.36■□□□□ 0.21
NDE1-203ENST00000570727 PRIMPOLQ96LW4 560 aa16.36■□□□□ 0.21
NDE1-203ENST00000570727 PAAF1Q9BRP4 392 aa16.36■□□□□ 0.21
NDE1-203ENST00000570727 CXCL16Q9H2A7 254 aa16.36■□□□□ 0.21
NDE1-203ENST00000570727 WDR6Q9NNW5 1121 aaKnown RBP16.36■□□□□ 0.21
NDE1-203ENST00000570727 PRMT7Q9NVM4 692 aaPredicted RBP16.36■□□□□ 0.21
NDE1-203ENST00000570727 FNIP2Q9P278 1114 aa16.36■□□□□ 0.21
NDE1-203ENST00000570727 ADAM28Q9UKQ2 775 aa16.36■□□□□ 0.21
NDE1-203ENST00000570727 LIMCH1Q9UPQ0 1083 aa16.36■□□□□ 0.21
NDE1-203ENST00000570727 USP20Q9Y2K6 914 aa16.36■□□□□ 0.21
NDE1-203ENST00000570727 ZMYM2Q9UBW7 1377 aa16.36■□□□□ 0.21
NDE1-203ENST00000570727 TRIP11Q15643 1979 aa16.35■□□□□ 0.21
NDE1-203ENST00000570727 TGM5O43548 720 aa16.35■□□□□ 0.21
NDE1-203ENST00000570727 NPR3P17342 541 aa16.35■□□□□ 0.21
NDE1-203ENST00000570727 CYP11B2P19099 503 aa16.35■□□□□ 0.21
NDE1-203ENST00000570727 CLCN5P51795 746 aa16.35■□□□□ 0.21
NDE1-203ENST00000570727 GRIK3Q13003 919 aa16.35■□□□□ 0.21
NDE1-203ENST00000570727 SAFBQ15424 915 aaKnown RBP eCLIP16.35■□□□□ 0.21
NDE1-203ENST00000570727 ECM1Q16610 540 aa16.35■□□□□ 0.21
NDE1-203ENST00000570727 POTEGQ6S5H5 508 aa16.35■□□□□ 0.21
NDE1-203ENST00000570727 PADI6Q6TGC4 694 aa16.35■□□□□ 0.21
NDE1-203ENST00000570727 CCDC83Q8IWF9 413 aa16.35■□□□□ 0.21
NDE1-203ENST00000570727 C4orf32Q8N8J7 132 aa16.35■□□□□ 0.21
NDE1-203ENST00000570727 ATOH1Q92858 354 aaPredicted RBP16.35■□□□□ 0.21
NDE1-203ENST00000570727 NT5C3AQ9H0P0 336 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms