RNA–Protein interactions for RNA: ENST00000570300.1

NPLOC4-203, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-203ENST00000570300 BAP1Q92560 729 aa11.96□□□□□ -0.49
NPLOC4-203ENST00000570300 VTI1AQ96AJ9 217 aa11.96□□□□□ -0.49
NPLOC4-203ENST00000570300 GANQ9H2C0 597 aa11.96□□□□□ -0.49
NPLOC4-203ENST00000570300 MMRN2Q9H8L6 949 aa11.96□□□□□ -0.49
NPLOC4-203ENST00000570300 DDX20Q9UHI6 824 aaKnown RBP11.96□□□□□ -0.49
NPLOC4-203ENST00000570300 AKT3Q9Y243 479 aa11.96□□□□□ -0.49
NPLOC4-203ENST00000570300 A0A087WZ62 844 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 C17orf102A2RUQ5 167 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 MYADML2A6NDP7 307 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 OGTO15294 1046 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 GPR32O75388 356 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 CCND3P30281 292 aaPredicted RBP11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 KLK7P49862 253 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 AP3M2P53677 418 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 IRX5P78411 483 aaPredicted RBP11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 PTPN11Q06124 597 aaPredicted RBP11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 PRPF4BQ13523 1007 aaKnown RBP11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 SURF1Q15526 300 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 TSR1Q2NL82 804 aaKnown RBP11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 KLHDC7AQ5VTJ3 777 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 TCERG1LQ5VWI1 586 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 MPZL3Q6UWV2 235 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 CYP26C1Q6V0L0 522 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 C15orf39Q6ZRI6 1047 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 CCDC155Q8N6L0 562 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 C7orf31Q8N865 590 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 LMO3Q8TAP4 145 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 PCMTD1Q96MG8 357 aaPredicted RBP11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 NLRP4Q96MN2 994 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 FDXACB1Q9BRP7 624 aaPredicted RBP11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 TSEN34Q9BSV6 310 aaKnown RBP11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 MSTO1Q9BUK6 570 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 INO80BQ9C086 356 aaPredicted RBP11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 HAPLN2Q9GZV7 340 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 MINDY3Q9H8M7 445 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 TMEM8AQ9HCN3 771 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 SIX2Q9NPC8 291 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 FAM207AQ9NSI2 230 aaPredicted RBP11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 HDAC6Q9UBN7 1215 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 GTF2IRD1Q9UHL9 959 aa11.95□□□□□ -0.5
NPLOC4-203ENST00000570300 A0A1B0GUA9 196 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 MOXD2PA6NHM9 499 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 INO80B-WBP1J3KQ70 363 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 EPHB6O15197 1021 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 CCP110O43303 1012 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 VTNP04004 478 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 GJB1P08034 283 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 IQCF3P0C7M6 154 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 MCF2P10911 925 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 CYP2C9P11712 490 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 UCHL3P15374 230 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 NLRP11P59045 1033 aaKnown RBP11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 PPP3CAQ08209 521 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 HIC1Q14526 733 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 NOLC1Q14978 699 aaKnown RBP eCLIP11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 CBWD6Q4V339 395 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 EPC2Q52LR7 807 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 CBWD3Q5JTY5 395 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 CBWD5Q5RIA9 395 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 ATF7IP2Q5U623 682 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 KRT39Q6A163 491 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 TRIM65Q6PJ69 517 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 WDR59Q6PJI9 974 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 RNF180Q86T96 592 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 BRSK2Q8IWQ3 736 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 CCDC170Q8IYT3 715 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 EHBP1Q8NDI1 1231 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 ZSWIM2Q8NEG5 633 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 CPLX3Q8WVH0 158 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 ZBTB10Q96DT7 871 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 SAAL1Q96ER3 474 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 FAM213AQ9BRX8 229 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 LSM14BQ9BX40 385 aaKnown RBP11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 SEZ6LQ9BYH1 1024 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 GCOM2Q9BZD3 368 aaPredicted RBP11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 AGPAT5Q9NUQ2 364 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 ZNHIT6Q9NWK9 470 aaKnown RBP11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 AIPL1Q9NZN9 384 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 GCNT4Q9P109 453 aa11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 CPSF3Q9UKF6 684 aaKnown RBP11.94□□□□□ -0.5
NPLOC4-203ENST00000570300 GOLGA8IPA6NC78 632 aa11.93□□□□□ -0.5
NPLOC4-203ENST00000570300 GOLGA8JA6NMD2 632 aa11.93□□□□□ -0.5
NPLOC4-203ENST00000570300 TTLL13PA6NNM8 815 aa11.93□□□□□ -0.5
NPLOC4-203ENST00000570300 LRRIQ3A6PVS8 624 aaPredicted RBP11.93□□□□□ -0.5
NPLOC4-203ENST00000570300 TREHO43280 583 aa11.93□□□□□ -0.5
NPLOC4-203ENST00000570300 ZC3H11AO75152 810 aaKnown RBP eCLIP11.93□□□□□ -0.5
NPLOC4-203ENST00000570300 PGK1P00558 417 aa11.93□□□□□ -0.5
NPLOC4-203ENST00000570300 TRIM49P0CI25 452 aa11.93□□□□□ -0.5
NPLOC4-203ENST00000570300 TRIM49CP0CI26 452 aa11.93□□□□□ -0.5
NPLOC4-203ENST00000570300 DARSP14868 501 aaKnown RBP11.93□□□□□ -0.5
NPLOC4-203ENST00000570300 SLC9A1P19634 815 aa11.93□□□□□ -0.5
NPLOC4-203ENST00000570300 ANXA13P27216 316 aa11.93□□□□□ -0.5
NPLOC4-203ENST00000570300 AXLP30530 894 aa11.93□□□□□ -0.5
NPLOC4-203ENST00000570300 GRK4P32298 578 aa11.93□□□□□ -0.5
NPLOC4-203ENST00000570300 CLCN1P35523 988 aa11.93□□□□□ -0.5
NPLOC4-203ENST00000570300 MXI1P50539 228 aa11.93□□□□□ -0.5
NPLOC4-203ENST00000570300 CRYBB1P53674 252 aaPredicted RBP11.93□□□□□ -0.5
NPLOC4-203ENST00000570300 JAM2P57087 298 aa11.93□□□□□ -0.5
NPLOC4-203ENST00000570300 DLG4P78352 724 aa11.93□□□□□ -0.5
NPLOC4-203ENST00000570300 MYL7Q01449 175 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms