RNA–Protein interactions for RNA: ENST00000569341.1

CFDP1-208, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-208ENST00000569341 HSPA4P34932 840 aa4.93□□□□□ -1.62
CFDP1-208ENST00000569341 USP6P35125 1406 aa4.93□□□□□ -1.62
CFDP1-208ENST00000569341 ADCY8P40145 1251 aa4.93□□□□□ -1.62
CFDP1-208ENST00000569341 FAM193AP78312 1265 aa4.93□□□□□ -1.62
CFDP1-208ENST00000569341 PCOLCEQ15113 449 aa4.93□□□□□ -1.62
CFDP1-208ENST00000569341 STILQ15468 1287 aa4.93□□□□□ -1.62
CFDP1-208ENST00000569341 EP400NLQ6ZTU2 488 aa4.93□□□□□ -1.62
CFDP1-208ENST00000569341 TMPRSS6Q8IU80 811 aa4.93□□□□□ -1.62
CFDP1-208ENST00000569341 UBR1Q8IWV7 1749 aa4.93□□□□□ -1.62
CFDP1-208ENST00000569341 ULK2Q8IYT8 1036 aa4.93□□□□□ -1.62
CFDP1-208ENST00000569341 FAM177A1Q8N128 213 aaPredicted RBP4.93□□□□□ -1.62
CFDP1-208ENST00000569341 RUFY2Q8WXA3 655 aa4.93□□□□□ -1.62
CFDP1-208ENST00000569341 CLIP3Q96DZ5 547 aa4.93□□□□□ -1.62
CFDP1-208ENST00000569341 ZSCAN31Q96LW9 406 aaPredicted RBP4.93□□□□□ -1.62
CFDP1-208ENST00000569341 MEIS3Q99687 375 aa4.93□□□□□ -1.62
CFDP1-208ENST00000569341 TSPY26PQ9H489 355 aa4.93□□□□□ -1.62
CFDP1-208ENST00000569341 AGO3Q9H9G7 860 aaKnown RBP4.93□□□□□ -1.62
CFDP1-208ENST00000569341 MSL2Q9HCI7 577 aa4.93□□□□□ -1.62
CFDP1-208ENST00000569341 SLC2A4RGQ9NR83 387 aa4.93□□□□□ -1.62
CFDP1-208ENST00000569341 CDC42EP3Q9UKI2 254 aa4.93□□□□□ -1.62
CFDP1-208ENST00000569341 SRPK3Q9UPE1 567 aa4.93□□□□□ -1.62
CFDP1-208ENST00000569341 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.93□□□□□ -1.62
CFDP1-208ENST00000569341 IGSF1Q8N6C5 1336 aa4.93□□□□□ -1.62
CFDP1-208ENST00000569341 USP42Q9H9J4 1324 aaKnown RBP4.93□□□□□ -1.62
CFDP1-208ENST00000569341 KIF20BQ96Q89 1820 aa4.93□□□□□ -1.62
CFDP1-208ENST00000569341 ZNF142P52746 1687 aaPredicted RBP4.92□□□□□ -1.62
CFDP1-208ENST00000569341 FAM83GA6ND36 823 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 MPIG6BO95866 241 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 AMY2AP04746 511 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 KRT15P19012 456 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 AMY2BP19961 511 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 PTGS1P23219 599 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 GJA4P35212 333 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 MMP14P50281 582 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 HGFACQ04756 655 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 PAK1Q13153 545 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 RAB33AQ14088 237 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 GRM7Q14831 915 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 SASS6Q6UVJ0 657 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 ARHGAP36Q6ZRI8 547 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 CXXC5Q7LFL8 322 aaKnown RBP4.92□□□□□ -1.62
CFDP1-208ENST00000569341 C16orf71Q8IYS4 520 aaPredicted RBP4.92□□□□□ -1.62
CFDP1-208ENST00000569341 GPT2Q8TD30 523 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 SSH3Q8TE77 659 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 KIF1BPQ96EK5 621 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 WNK4Q96J92 1243 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 CDC6Q99741 560 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 TM6SF1Q9BZW5 370 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 CATSPERZQ9NTU4 200 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 AURKAIP1Q9NWT8 199 aaPredicted RBP4.92□□□□□ -1.62
CFDP1-208ENST00000569341 GALNT8Q9NY28 637 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 BTBD7Q9P203 1132 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 USP25Q9UHP3 1055 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 TSPYL4Q9UJ04 414 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 ACEP12821 1306 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 TTC41PQ6P2S7 1318 aa4.92□□□□□ -1.62
CFDP1-208ENST00000569341 MAP3K5Q99683 1374 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 ANKARQ7Z5J8 1434 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 ADGRL3Q9HAR2 1447 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 PRAMEF25A6NGN4 478 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 CCDC85CA6NKD9 419 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 HIP1O00291 1037 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 MAN2B1O00754 1011 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 AQP7O14520 342 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 CAVIN2O95810 425 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 UBTFL1P0CB47 393 aaPredicted RBP4.91□□□□□ -1.62
CFDP1-208ENST00000569341 PDCP20941 246 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 MC4RP32245 332 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 GTF2F1P35269 517 aaKnown RBP eCLIP4.91□□□□□ -1.62
CFDP1-208ENST00000569341 UBE2HP62256 183 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 MTX1Q13505 466 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 RRS1Q15050 365 aaKnown RBP4.91□□□□□ -1.62
CFDP1-208ENST00000569341 TAF7Q15545 349 aaPredicted RBP4.91□□□□□ -1.62
CFDP1-208ENST00000569341 GPR19Q15760 415 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 CCDC183Q5T5S1 534 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 SPATC1Q76KD6 591 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 SGMS1Q86VZ5 419 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 PTRH1Q86Y79 214 aaKnown RBP4.91□□□□□ -1.62
CFDP1-208ENST00000569341 ERC1Q8IUD2 1116 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 NLGN4XQ8N0W4 816 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 CNTROBQ8N137 903 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 ZGPATQ8N5A5 531 aaKnown RBP4.91□□□□□ -1.62
CFDP1-208ENST00000569341 FBXO41Q8TF61 875 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 CRAMP1Q96RY5 1269 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 SPATA9Q9BWV2 254 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 AMNQ9BXJ7 453 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 ALDH8A1Q9H2A2 487 aaPredicted RBP4.91□□□□□ -1.62
CFDP1-208ENST00000569341 NELFAQ9H3P2 528 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 INCENPQ9NQS7 918 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 PFDN2Q9UHV9 154 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 FBXO10Q9UK96 956 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 LIMCH1Q9UPQ0 1083 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 GIT1Q9Y2X7 761 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 ATP23Q9Y6H3 246 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 KNDC1Q76NI1 1749 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 CCDC171Q6TFL3 1326 aa4.91□□□□□ -1.62
CFDP1-208ENST00000569341 SYCE3A1L190 88 aa4.9□□□□□ -1.63
CFDP1-208ENST00000569341 GOLGA6L6A8MZA4 724 aa4.9□□□□□ -1.63
CFDP1-208ENST00000569341 KCNK3O14649 394 aa4.9□□□□□ -1.63
CFDP1-208ENST00000569341 WNT9AO14904 365 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms