RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 XPNPEP1Q9NQW7 623 aa12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 COL4A3BPQ9Y5P4 624 aa12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 EP300Q09472 2414 aaPredicted RBP12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 MTCL1Q9Y4B5 1905 aaKnown RBP12.47□□□□□ -0.41
CHRFAM7A-206ENST00000569278 NRP1O14786 923 aa12.46□□□□□ -0.41
CHRFAM7A-206ENST00000569278 ZBTB39O15060 712 aa12.46□□□□□ -0.41
CHRFAM7A-206ENST00000569278 TEX28O15482 410 aa12.46□□□□□ -0.41
CHRFAM7A-206ENST00000569278 POMCP01189 267 aa12.46□□□□□ -0.41
CHRFAM7A-206ENST00000569278 PSMC5P62195 406 aa12.46□□□□□ -0.41
CHRFAM7A-206ENST00000569278 FGD1P98174 961 aa12.46□□□□□ -0.41
CHRFAM7A-206ENST00000569278 PPP2R5CQ13362 524 aa12.46□□□□□ -0.41
CHRFAM7A-206ENST00000569278 TDGQ13569 410 aa12.46□□□□□ -0.41
CHRFAM7A-206ENST00000569278 GIT2Q14161 759 aa12.46□□□□□ -0.41
CHRFAM7A-206ENST00000569278 INF2Q27J81 1249 aa12.46□□□□□ -0.41
CHRFAM7A-206ENST00000569278 KLHL40Q2TBA0 621 aa12.46□□□□□ -0.41
CHRFAM7A-206ENST00000569278 LETM2Q2VYF4 491 aa12.46□□□□□ -0.41
CHRFAM7A-206ENST00000569278 EARS2Q5JPH6 523 aaKnown RBP12.46□□□□□ -0.41
CHRFAM7A-206ENST00000569278 L1TD1Q5T7N2 865 aaKnown RBP12.46□□□□□ -0.41
CHRFAM7A-206ENST00000569278 COLGALT2Q8IYK4 626 aa12.46□□□□□ -0.41
CHRFAM7A-206ENST00000569278 GSTCDQ8NEC7 633 aa12.46□□□□□ -0.41
CHRFAM7A-206ENST00000569278 CMASQ8NFW8 434 aaPredicted RBP12.46□□□□□ -0.41
CHRFAM7A-206ENST00000569278 MYADMQ96S97 322 aa12.46□□□□□ -0.41
CHRFAM7A-206ENST00000569278 EIF2AQ9BY44 585 aaKnown RBP12.46□□□□□ -0.41
CHRFAM7A-206ENST00000569278 RSAD1Q9HA92 442 aa12.46□□□□□ -0.41
CHRFAM7A-206ENST00000569278 MAN1C1Q9NR34 630 aa12.46□□□□□ -0.41
CHRFAM7A-206ENST00000569278 GJB4Q9NTQ9 266 aa12.46□□□□□ -0.41
CHRFAM7A-206ENST00000569278 MIOSQ9NXC5 875 aa12.46□□□□□ -0.41
CHRFAM7A-206ENST00000569278 GPR179Q6PRD1 2367 aa12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 VWA8A3KMH1 1905 aa12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 STX6O43752 255 aa12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 TSPAN1O60635 241 aa12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 RFPL2O75678 378 aa12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 MBD3O95983 291 aa12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 SOD2P04179 222 aa12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 NLRP5P59047 1200 aa12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 LAMTOR4Q0VGL1 99 aa12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 AMHR2Q16671 573 aa12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 KIAA0319Q5VV43 1072 aa12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 ATL3Q6DD88 541 aa12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 C15orf39Q6ZRI6 1047 aa12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 BLIDQ8IZY5 108 aa12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 SIX5Q8N196 739 aa12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 FLCNQ8NFG4 579 aa12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 PRPF31Q8WWY3 499 aaKnown RBP12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 B3GALT6Q96L58 329 aa12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 ZFP42Q96MM3 310 aa12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 RPS6KC1Q96S38 1066 aa12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 TMEM175Q9BSA9 504 aa12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 DDX25Q9UHL0 483 aaKnown RBP12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 PRG3Q9Y2Y8 225 aaPredicted RBP12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 HES2Q9Y543 173 aa12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 MYH15Q9Y2K3 1946 aa12.45□□□□□ -0.42
CHRFAM7A-206ENST00000569278 PATJQ8NI35 1801 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 CLUHO75153 1309 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 CNTNAP2Q9UHC6 1331 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 NOTCH4Q99466 2003 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 C2CD2LO14523 706 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 PFKFB2O60825 505 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 MYBP10242 640 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 SKIP12755 728 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 MLH1P40692 756 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 CDC42EP1Q00587 391 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 RNASELQ05823 741 aaKnown RBP12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 EMC2Q15006 297 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 ANGPT1Q15389 498 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 ME3Q16798 604 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 OTOP3Q7RTS5 596 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 PPFIBP1Q86W92 1011 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 ZNF687Q8N1G0 1237 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 DTWD2Q8NBA8 298 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 ZDHHC16Q969W1 377 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 LXNQ9BS40 222 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 RHOBTB2Q9BYZ6 727 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 RXFP1Q9HBX9 757 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 WDR6Q9NNW5 1121 aaKnown RBP12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 RGL1Q9NZL6 768 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 DLGAP2Q9P1A6 1054 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 EPS15L1Q9UBC2 864 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 CACNG4Q9UBN1 327 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 TPCN1Q9ULQ1 816 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 KCNJ14Q9UNX9 436 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 IPPQ9Y573 584 aa12.44□□□□□ -0.42
CHRFAM7A-206ENST00000569278 CEP250Q9BV73 2442 aa12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 ARL5CA6NH57 179 aa12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 WNT7AO00755 349 aa12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 SRGAP2CP0DJJ0 459 aa12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 ZSCAN22P10073 491 aaPredicted RBP12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 SYT1P21579 422 aa12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 KLRC2P26717 231 aa12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 DEKP35659 375 aaKnown RBP12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 QARSP47897 775 aaKnown RBP12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 DNM2P50570 870 aa12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 SCNN1GP51170 649 aa12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 AKAP17AQ02040 695 aaKnown RBP12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 DSG1Q02413 1049 aa12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 LARP1BQ659C4 914 aaKnown RBP12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 SRGAP1Q7Z6B7 1085 aa12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 FERMT3Q86UX7 667 aa12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 ADSSL1Q8N142 457 aa12.43□□□□□ -0.42
CHRFAM7A-206ENST00000569278 ST13P5Q8NFI4 369 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms