RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 WDR5P61964 334 aaKnown RBP17.17■□□□□ 0.34
SPG7-218ENST00000568205 TYRO3Q06418 890 aa17.17■□□□□ 0.34
SPG7-218ENST00000568205 ZCWPW2Q504Y3 356 aa17.17■□□□□ 0.34
SPG7-218ENST00000568205 CENPPQ6IPU0 288 aa17.17■□□□□ 0.34
SPG7-218ENST00000568205 ARMCX5Q6P1M9 558 aa17.17■□□□□ 0.34
SPG7-218ENST00000568205 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.17■□□□□ 0.34
SPG7-218ENST00000568205 ECHDC2Q86YB7 292 aa17.17■□□□□ 0.34
SPG7-218ENST00000568205 C12orf56Q8IXR9 622 aa17.17■□□□□ 0.34
SPG7-218ENST00000568205 POMGNT1Q8WZA1 660 aa17.17■□□□□ 0.34
SPG7-218ENST00000568205 P2RX5Q93086 422 aa17.17■□□□□ 0.34
SPG7-218ENST00000568205 CBWD1Q9BRT8 395 aa17.17■□□□□ 0.34
SPG7-218ENST00000568205 MSTO1Q9BUK6 570 aa17.17■□□□□ 0.34
SPG7-218ENST00000568205 DACH1Q9UI36 760 aa17.17■□□□□ 0.34
SPG7-218ENST00000568205 CTNND2Q9UQB3 1225 aa17.17■□□□□ 0.34
SPG7-218ENST00000568205 TRAF3IP3Q9Y228 551 aa17.17■□□□□ 0.34
SPG7-218ENST00000568205 IPPQ9Y573 584 aa17.17■□□□□ 0.34
SPG7-218ENST00000568205 CALUO43852 315 aaPredicted RBP17.16■□□□□ 0.34
SPG7-218ENST00000568205 AMHP03971 560 aa17.16■□□□□ 0.34
SPG7-218ENST00000568205 IBSPP21815 317 aaPredicted RBP17.16■□□□□ 0.34
SPG7-218ENST00000568205 CCNE1P24864 410 aa17.16■□□□□ 0.34
SPG7-218ENST00000568205 KCNJ6P48051 423 aa17.16■□□□□ 0.34
SPG7-218ENST00000568205 PAK1Q13153 545 aa17.16■□□□□ 0.34
SPG7-218ENST00000568205 MRPL10Q7Z7H8 261 aaKnown RBP17.16■□□□□ 0.34
SPG7-218ENST00000568205 SMG8Q8ND04 991 aaKnown RBP17.16■□□□□ 0.34
SPG7-218ENST00000568205 NELFBQ8WX92 580 aa17.16■□□□□ 0.34
SPG7-218ENST00000568205 TSG101Q99816 390 aa17.16■□□□□ 0.34
SPG7-218ENST00000568205 UBE2OQ9C0C9 1292 aaKnown RBP17.16■□□□□ 0.34
SPG7-218ENST00000568205 MTIF3Q9H2K0 278 aaKnown RBP17.16■□□□□ 0.34
SPG7-218ENST00000568205 NXF3Q9H4D5 531 aaKnown RBP17.16■□□□□ 0.34
SPG7-218ENST00000568205 CXXC1Q9P0U4 656 aaPredicted RBP17.16■□□□□ 0.34
SPG7-218ENST00000568205 AGO2Q9UKV8 859 aaKnown RBP17.16■□□□□ 0.34
SPG7-218ENST00000568205 KIAA0391O15091 583 aaKnown RBP17.15■□□□□ 0.34
SPG7-218ENST00000568205 CLIC2O15247 247 aa17.15■□□□□ 0.34
SPG7-218ENST00000568205 OGTO15294 1046 aa17.15■□□□□ 0.34
SPG7-218ENST00000568205 NR3C1P04150 777 aa17.15■□□□□ 0.34
SPG7-218ENST00000568205 CCDC192P0DO97 292 aa17.15■□□□□ 0.34
SPG7-218ENST00000568205 ATF7P17544 494 aaPredicted RBP17.15■□□□□ 0.34
SPG7-218ENST00000568205 GRM5P41594 1212 aa17.15■□□□□ 0.34
SPG7-218ENST00000568205 PMS1P54277 932 aaKnown RBP17.15■□□□□ 0.34
SPG7-218ENST00000568205 DEFB103AP81534 67 aa17.15■□□□□ 0.34
SPG7-218ENST00000568205 LRRC63Q05C16 580 aa17.15■□□□□ 0.34
SPG7-218ENST00000568205 EDRF1Q3B7T1 1238 aa17.15■□□□□ 0.34
SPG7-218ENST00000568205 C9orf50Q5SZB4 431 aa17.15■□□□□ 0.34
SPG7-218ENST00000568205 RASIP1Q5U651 963 aa17.15■□□□□ 0.34
SPG7-218ENST00000568205 ZNF598Q86UK7 904 aaKnown RBP17.15■□□□□ 0.34
SPG7-218ENST00000568205 THNSL1Q8IYQ7 743 aa17.15■□□□□ 0.34
SPG7-218ENST00000568205 HACE1Q8IYU2 909 aa17.15■□□□□ 0.34
SPG7-218ENST00000568205 CEP120Q8N960 986 aa17.15■□□□□ 0.34
SPG7-218ENST00000568205 RNF169Q8NCN4 708 aa17.15■□□□□ 0.34
SPG7-218ENST00000568205 PCIF1Q9H4Z3 704 aa17.15■□□□□ 0.34
SPG7-218ENST00000568205 ELAC1Q9H777 363 aaKnown RBP17.15■□□□□ 0.34
SPG7-218ENST00000568205 TMEM161AQ9NX61 479 aa17.15■□□□□ 0.34
SPG7-218ENST00000568205 HSPBP1Q9NZL4 362 aa17.15■□□□□ 0.34
SPG7-218ENST00000568205 HES2Q9Y543 173 aa17.15■□□□□ 0.34
SPG7-218ENST00000568205 BICDL2A1A5D9 508 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 TRIM49BA6NDI0 452 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 FAM189A1O60320 539 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 EOMESO95936 686 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 STAG3L1P0CL83 205 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 ITGA4P13612 1032 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 CYP2J2P51589 502 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 STX17P56962 302 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 MYBPC2Q14324 1141 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 NFIL3Q16649 462 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 KYAT1Q16773 422 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 CT47A1Q5JQC4 288 aaPredicted RBP17.14■□□□□ 0.33
SPG7-218ENST00000568205 ZBTB41Q5SVQ8 909 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 ANKRD40Q6AI12 368 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 FOXR2Q6PJQ5 311 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 NPAS4Q8IUM7 802 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 SLC9A9Q8IVB4 645 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 CRIPAKQ8N1N5 446 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 TMEM174Q8WUU8 243 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 PGBD4Q96DM1 585 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 SAAL1Q96ER3 474 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 RNPC3Q96LT9 517 aaKnown RBP17.14■□□□□ 0.33
SPG7-218ENST00000568205 FUCA2Q9BTY2 467 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 CCDC94Q9BW85 323 aaPredicted RBP17.14■□□□□ 0.33
SPG7-218ENST00000568205 APOL6Q9BWW8 343 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 GZF1Q9H116 711 aaPredicted RBP17.14■□□□□ 0.33
SPG7-218ENST00000568205 RNF39Q9H2S5 420 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 DMAC2Q9NW81 257 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 RNF216Q9NWF9 866 aaPredicted RBP17.14■□□□□ 0.33
SPG7-218ENST00000568205 SNTG2Q9NY99 539 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 RWDD2AQ9UIY3 292 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 PCDHB7Q9Y5E2 793 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 SLC4A7Q9Y6M7 1214 aa17.14■□□□□ 0.33
SPG7-218ENST00000568205 EXTL3O43909 919 aa17.13■□□□□ 0.33
SPG7-218ENST00000568205 CLTAP09496 248 aa17.13■□□□□ 0.33
SPG7-218ENST00000568205 ERCC5P28715 1186 aaPredicted RBP17.13■□□□□ 0.33
SPG7-218ENST00000568205 BMP8BP34820 402 aa17.13■□□□□ 0.33
SPG7-218ENST00000568205 OSTNP61366 133 aa17.13■□□□□ 0.33
SPG7-218ENST00000568205 SHHQ15465 462 aa17.13■□□□□ 0.33
SPG7-218ENST00000568205 SEZ6Q53EL9 994 aa17.13■□□□□ 0.33
SPG7-218ENST00000568205 TTI2Q6NXR4 508 aa17.13■□□□□ 0.33
SPG7-218ENST00000568205 C11orf57Q6ZUT1 292 aaPredicted RBP17.13■□□□□ 0.33
SPG7-218ENST00000568205 GPD1LQ8N335 351 aa17.13■□□□□ 0.33
SPG7-218ENST00000568205 XXYLT1Q8NBI6 393 aa17.13■□□□□ 0.33
SPG7-218ENST00000568205 ZSWIM2Q8NEG5 633 aa17.13■□□□□ 0.33
SPG7-218ENST00000568205 LPPQ93052 612 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms