RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 WNK4Q96J92 1243 aa18.07■□□□□ 0.48
CMTM3-213ENST00000566756 THAP2Q9H0W7 228 aa18.07■□□□□ 0.48
CMTM3-213ENST00000566756 CNOT10Q9H9A5 744 aaKnown RBP18.07■□□□□ 0.48
CMTM3-213ENST00000566756 FOXN3O00409 490 aaPredicted RBP18.06■□□□□ 0.48
CMTM3-213ENST00000566756 LYPLA2O95372 231 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 ABCB4P21439 1286 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 FLT3P36888 993 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 CDR1P51861 262 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 RPS6P62753 249 aaKnown RBP18.06■□□□□ 0.48
CMTM3-213ENST00000566756 DHX9Q08211 1270 aaKnown RBP18.06■□□□□ 0.48
CMTM3-213ENST00000566756 EPC2Q52LR7 807 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 PCNX4Q63HM2 1172 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 OTUD6BQ8N6M0 293 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 SLC17A8Q8NDX2 589 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 RUNDC3BQ96NL0 473 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 ACCSQ96QU6 501 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 FAM129AQ9BZQ8 928 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 ZDHHC18Q9NUE0 388 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 GMNCA6NCL1 334 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 TRAPPC3O43617 180 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 P4HBP07237 508 aaKnown RBP18.06■□□□□ 0.48
CMTM3-213ENST00000566756 GZMAP12544 262 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 CHRNA3P32297 505 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 VAMP7P51809 220 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 PTPROQ16827 1216 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 PADI6Q6TGC4 694 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 RNF207Q6ZRF8 634 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 PNMA8AQ86V59 439 aaPredicted RBP18.06■□□□□ 0.48
CMTM3-213ENST00000566756 HOOK3Q86VS8 718 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 ERO1BQ86YB8 467 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 KSR1Q8IVT5 923 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 TLCD1Q96CP7 247 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 IWS1Q96ST2 819 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 CELF4Q9BZC1 486 aaKnown RBP18.06■□□□□ 0.48
CMTM3-213ENST00000566756 RNF146Q9NTX7 359 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 PARP2Q9UGN5 583 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 COG5Q9UP83 839 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 A0A0G2JMZ2 1700 aa18.06■□□□□ 0.48
CMTM3-213ENST00000566756 K7ENM7 598 aa18.05■□□□□ 0.48
CMTM3-213ENST00000566756 PODXLO00592 558 aa18.05■□□□□ 0.48
CMTM3-213ENST00000566756 PHF2O75151 1096 aa18.05■□□□□ 0.48
CMTM3-213ENST00000566756 RTN2O75298 545 aa18.05■□□□□ 0.48
CMTM3-213ENST00000566756 LIG3P49916 1009 aa18.05■□□□□ 0.48
CMTM3-213ENST00000566756 GPC5P78333 572 aa18.05■□□□□ 0.48
CMTM3-213ENST00000566756 PLCB4Q15147 1175 aa18.05■□□□□ 0.48
CMTM3-213ENST00000566756 C6orf89Q6UWU4 347 aa18.05■□□□□ 0.48
CMTM3-213ENST00000566756 MMS22LQ6ZRQ5 1243 aa18.05■□□□□ 0.48
CMTM3-213ENST00000566756 PROCA1Q8NCQ7 364 aaPredicted RBP18.05■□□□□ 0.48
CMTM3-213ENST00000566756 CENPTQ96BT3 561 aa18.05■□□□□ 0.48
CMTM3-213ENST00000566756 TEX13BQ9BXU2 312 aa18.05■□□□□ 0.48
CMTM3-213ENST00000566756 RABEP2Q9H5N1 569 aa18.05■□□□□ 0.48
CMTM3-213ENST00000566756 HOMER2Q9NSB8 354 aa18.05■□□□□ 0.48
CMTM3-213ENST00000566756 PCYOX1Q9UHG3 505 aa18.05■□□□□ 0.48
CMTM3-213ENST00000566756 ALG6Q9Y672 507 aa18.05■□□□□ 0.48
CMTM3-213ENST00000566756 EMSYQ7Z589 1322 aa18.05■□□□□ 0.48
CMTM3-213ENST00000566756 C5orf60A6NFR6 353 aa18.04■□□□□ 0.48
CMTM3-213ENST00000566756 SPDYE5A6NIY4 337 aa18.04■□□□□ 0.48
CMTM3-213ENST00000566756 SPDYE16A6NNV3 312 aaPredicted RBP18.04■□□□□ 0.48
CMTM3-213ENST00000566756 CXCL11O14625 94 aa18.04■□□□□ 0.48
CMTM3-213ENST00000566756 HPDP32754 393 aaPredicted RBP18.04■□□□□ 0.48
CMTM3-213ENST00000566756 UBXN2AP68543 259 aa18.04■□□□□ 0.48
CMTM3-213ENST00000566756 TMEM132BQ14DG7 1078 aa18.04■□□□□ 0.48
CMTM3-213ENST00000566756 ARHGAP44Q17R89 818 aa18.04■□□□□ 0.48
CMTM3-213ENST00000566756 CNPY4Q8N129 248 aa18.04■□□□□ 0.48
CMTM3-213ENST00000566756 OR2W6PQ8NHA6 318 aa18.04■□□□□ 0.48
CMTM3-213ENST00000566756 WNT8AQ9H1J5 351 aa18.04■□□□□ 0.48
CMTM3-213ENST00000566756 TAS2R14Q9NYV8 317 aa18.04■□□□□ 0.48
CMTM3-213ENST00000566756 RIPK3Q9Y572 518 aa18.04■□□□□ 0.48
CMTM3-213ENST00000566756 UBIAD1Q9Y5Z9 338 aa18.04■□□□□ 0.48
CMTM3-213ENST00000566756 E7EVH7 732 aa18.04■□□□□ 0.48
CMTM3-213ENST00000566756 PLS3P13797 630 aa18.04■□□□□ 0.48
CMTM3-213ENST00000566756 CTNNA2P26232 953 aa18.04■□□□□ 0.48
CMTM3-213ENST00000566756 SNRNP48Q6IEG0 339 aaKnown RBP18.04■□□□□ 0.48
CMTM3-213ENST00000566756 XRRA1Q6P2D8 792 aa18.04■□□□□ 0.48
CMTM3-213ENST00000566756 MIER3Q7Z3K6 550 aa18.04■□□□□ 0.48
CMTM3-213ENST00000566756 XXYLT1Q8NBI6 393 aa18.04■□□□□ 0.48
CMTM3-213ENST00000566756 TAAR1Q96RJ0 339 aa18.04■□□□□ 0.48
CMTM3-213ENST00000566756 ZSWIM1Q9BR11 485 aa18.04■□□□□ 0.48
CMTM3-213ENST00000566756 DPH5Q9H2P9 285 aa18.04■□□□□ 0.48
CMTM3-213ENST00000566756 UBE2TQ9NPD8 197 aaPredicted RBP18.04■□□□□ 0.48
CMTM3-213ENST00000566756 NR2E1Q9Y466 385 aa18.04■□□□□ 0.48
CMTM3-213ENST00000566756 A0A0G2JLL6 359 aaPredicted RBP18.03■□□□□ 0.48
CMTM3-213ENST00000566756 ITGB5P18084 799 aa18.03■□□□□ 0.48
CMTM3-213ENST00000566756 USP8P40818 1118 aa18.03■□□□□ 0.48
CMTM3-213ENST00000566756 FNTAP49354 379 aa18.03■□□□□ 0.48
CMTM3-213ENST00000566756 GTF2BQ00403 316 aa18.03■□□□□ 0.48
CMTM3-213ENST00000566756 BYSLQ13895 437 aaKnown RBP18.03■□□□□ 0.48
CMTM3-213ENST00000566756 KRT71Q3SY84 523 aa18.03■□□□□ 0.48
CMTM3-213ENST00000566756 SLC30A10Q6XR72 485 aa18.03■□□□□ 0.48
CMTM3-213ENST00000566756 PRRT2Q7Z6L0 340 aaPredicted RBP18.03■□□□□ 0.48
CMTM3-213ENST00000566756 JAMLQ86YT9 394 aa18.03■□□□□ 0.48
CMTM3-213ENST00000566756 BANK1Q8NDB2 785 aa18.03■□□□□ 0.48
CMTM3-213ENST00000566756 ALG3Q92685 438 aa18.03■□□□□ 0.48
CMTM3-213ENST00000566756 CYFIP2Q96F07 1278 aa18.03■□□□□ 0.48
CMTM3-213ENST00000566756 TRIM51Q9BSJ1 452 aa18.03■□□□□ 0.48
CMTM3-213ENST00000566756 PABPC3Q9H361 631 aaKnown RBP18.03■□□□□ 0.48
CMTM3-213ENST00000566756 CENPHQ9H3R5 247 aa18.03■□□□□ 0.48
CMTM3-213ENST00000566756 KIAA0391O15091 583 aaKnown RBP18.02■□□□□ 0.48
CMTM3-213ENST00000566756 FTLP02792 175 aaPredicted RBP18.02■□□□□ 0.48
CMTM3-213ENST00000566756 PTGIRP43119 386 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms