RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 ABHD14A-ACY1A0A1B0GW23 586 aa12.57□□□□□ -0.4
KARS-207ENST00000566560 ZBBXA8MT70 800 aa12.57□□□□□ -0.4
KARS-207ENST00000566560 PIGRP01833 764 aa12.57□□□□□ -0.4
KARS-207ENST00000566560 FGBP02675 491 aa12.57□□□□□ -0.4
KARS-207ENST00000566560 IBSPP21815 317 aaPredicted RBP12.57□□□□□ -0.4
KARS-207ENST00000566560 HOXA11P31270 313 aaPredicted RBP12.57□□□□□ -0.4
KARS-207ENST00000566560 KCNJ6P48051 423 aa12.57□□□□□ -0.4
KARS-207ENST00000566560 KCNA1Q09470 495 aa12.57□□□□□ -0.4
KARS-207ENST00000566560 DSC3Q14574 896 aa12.57□□□□□ -0.4
KARS-207ENST00000566560 BMT2Q1RMZ1 405 aa12.57□□□□□ -0.4
KARS-207ENST00000566560 SKOR2Q2VWA4 1001 aaPredicted RBP12.57□□□□□ -0.4
KARS-207ENST00000566560 TMEM240Q5SV17 173 aa12.57□□□□□ -0.4
KARS-207ENST00000566560 ZNF658Q5TYW1 1059 aaPredicted RBP12.57□□□□□ -0.4
KARS-207ENST00000566560 ISM2Q6H9L7 571 aa12.57□□□□□ -0.4
KARS-207ENST00000566560 ZPBP2Q6X784 338 aa12.57□□□□□ -0.4
KARS-207ENST00000566560 FAM43BQ6ZT52 329 aaPredicted RBP12.57□□□□□ -0.4
KARS-207ENST00000566560 C16orf59Q7L2K0 433 aa12.57□□□□□ -0.4
KARS-207ENST00000566560 APBB1IPQ7Z5R6 666 aaPredicted RBP12.57□□□□□ -0.4
KARS-207ENST00000566560 CDR2LQ86X02 465 aaPredicted RBP12.57□□□□□ -0.4
KARS-207ENST00000566560 NELFCDQ8IXH7 590 aa12.57□□□□□ -0.4
KARS-207ENST00000566560 MYOCDQ8IZQ8 938 aa12.57□□□□□ -0.4
KARS-207ENST00000566560 SYCP3Q8IZU3 236 aa12.57□□□□□ -0.4
KARS-207ENST00000566560 TRIML1Q8N9V2 468 aa12.57□□□□□ -0.4
KARS-207ENST00000566560 ACO2Q99798 780 aaKnown RBP12.57□□□□□ -0.4
KARS-207ENST00000566560 GDF15Q99988 308 aa12.57□□□□□ -0.4
KARS-207ENST00000566560 ADPGKQ9BRR6 497 aa12.57□□□□□ -0.4
KARS-207ENST00000566560 GTPBP4Q9BZE4 634 aaKnown RBP12.57□□□□□ -0.4
KARS-207ENST00000566560 UBE2OQ9C0C9 1292 aaKnown RBP12.57□□□□□ -0.4
KARS-207ENST00000566560 MTIF3Q9H2K0 278 aaKnown RBP12.57□□□□□ -0.4
KARS-207ENST00000566560 TMEM206Q9H813 350 aa12.57□□□□□ -0.4
KARS-207ENST00000566560 C1orf112Q9NSG2 853 aa12.57□□□□□ -0.4
KARS-207ENST00000566560 TNFSF13BQ9Y275 285 aa12.57□□□□□ -0.4
KARS-207ENST00000566560 RALGAPA2Q2PPJ7 1873 aa12.57□□□□□ -0.4
KARS-207ENST00000566560 A0A1B0GUA9 196 aa12.56□□□□□ -0.4
KARS-207ENST00000566560 PPP1R3GB7ZBB8 358 aa12.56□□□□□ -0.4
KARS-207ENST00000566560 KIF20AO95235 890 aa12.56□□□□□ -0.4
KARS-207ENST00000566560 NPTXRO95502 500 aa12.56□□□□□ -0.4
KARS-207ENST00000566560 HARSP12081 509 aaKnown RBP12.56□□□□□ -0.4
KARS-207ENST00000566560 MATR3P43243 847 aaKnown RBP eCLIP12.56□□□□□ -0.4
KARS-207ENST00000566560 RAB27AP51159 221 aa12.56□□□□□ -0.4
KARS-207ENST00000566560 WDR5P61964 334 aaKnown RBP12.56□□□□□ -0.4
KARS-207ENST00000566560 MORC3Q14149 939 aa12.56□□□□□ -0.4
KARS-207ENST00000566560 NOLC1Q14978 699 aaKnown RBP eCLIP12.56□□□□□ -0.4
KARS-207ENST00000566560 DCAF4L1Q3SXM0 396 aa12.56□□□□□ -0.4
KARS-207ENST00000566560 EEF1DP3Q658K8 133 aa12.56□□□□□ -0.4
KARS-207ENST00000566560 SLC27A1Q6PCB7 646 aa12.56□□□□□ -0.4
KARS-207ENST00000566560 MPZL3Q6UWV2 235 aa12.56□□□□□ -0.4
KARS-207ENST00000566560 RBM43Q6ZSC3 357 aaKnown RBP12.56□□□□□ -0.4
KARS-207ENST00000566560 ZNF507Q8TCN5 953 aa12.56□□□□□ -0.4
KARS-207ENST00000566560 HERVK_113Q902F9 699 aa12.56□□□□□ -0.4
KARS-207ENST00000566560 RNPC3Q96LT9 517 aaKnown RBP12.56□□□□□ -0.4
KARS-207ENST00000566560 EIF2AQ9BY44 585 aaKnown RBP12.56□□□□□ -0.4
KARS-207ENST00000566560 TRIM6Q9C030 488 aaPredicted RBP12.56□□□□□ -0.4
KARS-207ENST00000566560 IKZF4Q9H2S9 585 aa12.56□□□□□ -0.4
KARS-207ENST00000566560 RGS18Q9NS28 235 aa12.56□□□□□ -0.4
KARS-207ENST00000566560 MAPK8IP1Q9UQF2 711 aa12.56□□□□□ -0.4
KARS-207ENST00000566560 CITO14578 2027 aa12.55□□□□□ -0.4
KARS-207ENST00000566560 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.55□□□□□ -0.4
KARS-207ENST00000566560 TISP43B9A030 160 aa12.55□□□□□ -0.4
KARS-207ENST00000566560 TOM1L1O75674 476 aa12.55□□□□□ -0.4
KARS-207ENST00000566560 AMHP03971 560 aa12.55□□□□□ -0.4
KARS-207ENST00000566560 COL9A1P20849 921 aa12.55□□□□□ -0.4
KARS-207ENST00000566560 PROZP22891 400 aa12.55□□□□□ -0.4
KARS-207ENST00000566560 HOXD13P35453 343 aa12.55□□□□□ -0.4
KARS-207ENST00000566560 PBX2P40425 430 aa12.55□□□□□ -0.4
KARS-207ENST00000566560 STIM1Q13586 685 aa12.55□□□□□ -0.4
KARS-207ENST00000566560 KNOP1Q1ED39 458 aaKnown RBP12.55□□□□□ -0.4
KARS-207ENST00000566560 C9orf50Q5SZB4 431 aa12.55□□□□□ -0.4
KARS-207ENST00000566560 UBXN11Q5T124 520 aa12.55□□□□□ -0.4
KARS-207ENST00000566560 SLC39A4Q6P5W5 647 aa12.55□□□□□ -0.4
KARS-207ENST00000566560 SLC24A5Q71RS6 500 aa12.55□□□□□ -0.4
KARS-207ENST00000566560 ZBTB33Q86T24 672 aa12.55□□□□□ -0.4
KARS-207ENST00000566560 GUF1Q8N442 669 aaKnown RBP12.55□□□□□ -0.4
KARS-207ENST00000566560 KCNK17Q96T54 332 aa12.55□□□□□ -0.4
KARS-207ENST00000566560 TCHPQ9BT92 498 aa12.55□□□□□ -0.4
KARS-207ENST00000566560 GBP3Q9H0R5 595 aa12.55□□□□□ -0.4
KARS-207ENST00000566560 CDT1Q9H211 546 aa12.55□□□□□ -0.4
KARS-207ENST00000566560 FAM105AQ9NUU6 356 aa12.55□□□□□ -0.4
KARS-207ENST00000566560 TNRC18O15417 2968 aaPredicted RBP12.55□□□□□ -0.4
KARS-207ENST00000566560 GBF1Q92538 1859 aa12.55□□□□□ -0.4
KARS-207ENST00000566560 C9IYK1 514 aa12.54□□□□□ -0.4
KARS-207ENST00000566560 ANKRD63C9JTQ0 380 aa12.54□□□□□ -0.4
KARS-207ENST00000566560 ARHGAP33O14559 1287 aa12.54□□□□□ -0.4
KARS-207ENST00000566560 ENPP3O14638 875 aa12.54□□□□□ -0.4
KARS-207ENST00000566560 ABLIM1O14639 778 aa12.54□□□□□ -0.4
KARS-207ENST00000566560 CLDN3O15551 220 aa12.54□□□□□ -0.4
KARS-207ENST00000566560 MCF2P10911 925 aa12.54□□□□□ -0.4
KARS-207ENST00000566560 SKIP12755 728 aa12.54□□□□□ -0.4
KARS-207ENST00000566560 BMP6P22004 513 aa12.54□□□□□ -0.4
KARS-207ENST00000566560 PPP1R2P41236 205 aa12.54□□□□□ -0.4
KARS-207ENST00000566560 DEFB103AP81534 67 aa12.54□□□□□ -0.4
KARS-207ENST00000566560 MCL1Q07820 350 aa12.54□□□□□ -0.4
KARS-207ENST00000566560 COBLL1Q53SF7 1204 aa12.54□□□□□ -0.4
KARS-207ENST00000566560 ARMCX5Q6P1M9 558 aa12.54□□□□□ -0.4
KARS-207ENST00000566560 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.54□□□□□ -0.43e-10■□□□□ 10.6
KARS-207ENST00000566560 HS2ST1Q7LGA3 356 aa12.54□□□□□ -0.4
KARS-207ENST00000566560 RTN4RL1Q86UN2 441 aaPredicted RBP12.54□□□□□ -0.4
KARS-207ENST00000566560 ECHDC2Q86YB7 292 aa12.54□□□□□ -0.4
KARS-207ENST00000566560 RNF169Q8NCN4 708 aa12.54□□□□□ -0.4
KARS-207ENST00000566560 GOLGA5Q8TBA6 731 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms