RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 SLC9A7Q96T83 725 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 KCTD10Q9H3F6 313 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 RMND1Q9NWS8 449 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 KIAA1468Q9P260 1216 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 HOOK1Q9UJC3 728 aaKnown RBP8.95□□□□□ -0.98
CDH13-208ENST00000566333 COLQQ9Y215 455 aaPredicted RBP8.95□□□□□ -0.98
CDH13-208ENST00000566333 HES2Q9Y543 173 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 IPPQ9Y573 584 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 PCDHB2Q9Y5E7 798 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 PCDHB13Q9Y5F0 798 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 EYSQ5T1H1 3165 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 MYO7AQ13402 2215 aa8.95□□□□□ -0.98
CDH13-208ENST00000566333 A0A0B4J269 797 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 BIN1O00499 593 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 INPPL1O15357 1258 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 ZNF623O75123 536 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 GJB5O95377 273 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 AMHP03971 560 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 MCF2P10911 925 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 FGFR1P11362 822 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 ATP2A2P16615 1042 aaKnown RBP8.94□□□□□ -0.98
CDH13-208ENST00000566333 ZSCAN20P17040 1043 aaPredicted RBP8.94□□□□□ -0.98
CDH13-208ENST00000566333 KCNJ6P48051 423 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 LIG4P49917 911 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 GATMP50440 423 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 RAB27AP51159 221 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 HTRA4P83105 476 aaPredicted RBP8.94□□□□□ -0.98
CDH13-208ENST00000566333 NFKBIBQ15653 356 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 CCDC183Q5T5S1 534 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 AGMOQ6ZNB7 445 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 STXBP4Q6ZWJ1 553 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 MRPL10Q7Z7H8 261 aaKnown RBP8.94□□□□□ -0.98
CDH13-208ENST00000566333 HERC6Q8IVU3 1022 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 NELFCDQ8IXH7 590 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 TMEM192Q8IY95 271 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 GUF1Q8N442 669 aaKnown RBP8.94□□□□□ -0.98
CDH13-208ENST00000566333 ZSWIM2Q8NEG5 633 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 LPPQ93052 612 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 TOP1MTQ969P6 601 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 BICD1Q96G01 975 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 CBWD1Q9BRT8 395 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 CXCL16Q9H2A7 254 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 ELAC1Q9H777 363 aaKnown RBP8.94□□□□□ -0.98
CDH13-208ENST00000566333 AGPAT3Q9NRZ7 376 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 TMEM161AQ9NX61 479 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 MAPK8IP1Q9UQF2 711 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 SLC4A7Q9Y6M7 1214 aa8.94□□□□□ -0.98
CDH13-208ENST00000566333 A0A1W2PPC1 479 aa8.93□□□□□ -0.98
CDH13-208ENST00000566333 LCHNA4D1U4 455 aa8.93□□□□□ -0.98
CDH13-208ENST00000566333 GRXCR1A8MXD5 290 aa8.93□□□□□ -0.98
CDH13-208ENST00000566333 B4GALT3O60512 393 aa8.93□□□□□ -0.98
CDH13-208ENST00000566333 RECQL4O94761 1208 aa8.93□□□□□ -0.98
CDH13-208ENST00000566333 ARHGEF15O94989 841 aa8.93□□□□□ -0.98
CDH13-208ENST00000566333 LINC00271P0C7V0 271 aa8.93□□□□□ -0.98
CDH13-208ENST00000566333 HARSP12081 509 aaKnown RBP8.93□□□□□ -0.98
CDH13-208ENST00000566333 TNFSF9P41273 254 aa8.93□□□□□ -0.98
CDH13-208ENST00000566333 GRM5P41594 1212 aa8.93□□□□□ -0.98
CDH13-208ENST00000566333 PRCPP42785 496 aa8.93□□□□□ -0.98
CDH13-208ENST00000566333 AFF1P51825 1210 aaKnown RBP8.93□□□□□ -0.98
CDH13-208ENST00000566333 PMS1P54277 932 aaKnown RBP8.93□□□□□ -0.98
CDH13-208ENST00000566333 KNOP1Q1ED39 458 aaKnown RBP8.93□□□□□ -0.98
CDH13-208ENST00000566333 DPCR1Q3MIW9 517 aa8.93□□□□□ -0.98
CDH13-208ENST00000566333 ISM2Q6H9L7 571 aa8.93□□□□□ -0.98
CDH13-208ENST00000566333 CAVIN1Q6NZI2 390 aaKnown RBP8.93□□□□□ -0.98
CDH13-208ENST00000566333 ZBTB33Q86T24 672 aa8.93□□□□□ -0.98
CDH13-208ENST00000566333 C12orf56Q8IXR9 622 aa8.93□□□□□ -0.98
CDH13-208ENST00000566333 ADSSL1Q8N142 457 aa8.93□□□□□ -0.98
CDH13-208ENST00000566333 TRIML1Q8N9V2 468 aa8.93□□□□□ -0.98
CDH13-208ENST00000566333 PHOSPHO2Q8TCD6 241 aa8.93□□□□□ -0.98
CDH13-208ENST00000566333 SP7Q8TDD2 431 aaPredicted RBP8.93□□□□□ -0.98
CDH13-208ENST00000566333 CCDC47Q96A33 483 aaKnown RBP8.93□□□□□ -0.98
CDH13-208ENST00000566333 ZNF689Q96CS4 500 aaPredicted RBP8.93□□□□□ -0.98
CDH13-208ENST00000566333 GBP3Q9H0R5 595 aa8.93□□□□□ -0.98
CDH13-208ENST00000566333 MTIF3Q9H2K0 278 aaKnown RBP8.93□□□□□ -0.98
CDH13-208ENST00000566333 TMEM206Q9H813 350 aa8.93□□□□□ -0.98
CDH13-208ENST00000566333 HCSTQ9UBK5 93 aa8.93□□□□□ -0.98
CDH13-208ENST00000566333 BRWD1Q9NSI6 2320 aa8.92□□□□□ -0.98
CDH13-208ENST00000566333 PPP1R3GB7ZBB8 358 aa8.92□□□□□ -0.98
CDH13-208ENST00000566333 OGTO15294 1046 aa8.92□□□□□ -0.98
CDH13-208ENST00000566333 CLDN3O15551 220 aa8.92□□□□□ -0.98
CDH13-208ENST00000566333 DGKIO75912 1065 aa8.92□□□□□ -0.98
CDH13-208ENST00000566333 UPP2O95045 317 aa8.92□□□□□ -0.98
CDH13-208ENST00000566333 EOMESO95936 686 aa8.92□□□□□ -0.98
CDH13-208ENST00000566333 CXCL8P10145 99 aa8.92□□□□□ -0.98
CDH13-208ENST00000566333 SKIP12755 728 aa8.92□□□□□ -0.98
CDH13-208ENST00000566333 MYOGP15173 224 aa8.92□□□□□ -0.98
CDH13-208ENST00000566333 PTMSP20962 102 aa8.92□□□□□ -0.98
CDH13-208ENST00000566333 IBSPP21815 317 aaPredicted RBP8.92□□□□□ -0.98
CDH13-208ENST00000566333 GARTP22102 1010 aa8.92□□□□□ -0.98
CDH13-208ENST00000566333 AKAP5P24588 427 aa8.92□□□□□ -0.98
CDH13-208ENST00000566333 PBX2P40425 430 aa8.92□□□□□ -0.98
CDH13-208ENST00000566333 MLH1P40692 756 aa8.92□□□□□ -0.98
CDH13-208ENST00000566333 RABGGTBP53611 331 aa8.92□□□□□ -0.98
CDH13-208ENST00000566333 WNT7BP56706 349 aa8.92□□□□□ -0.98
CDH13-208ENST00000566333 NCBP1Q09161 790 aaKnown RBP8.92□□□□□ -0.98
CDH13-208ENST00000566333 TMEM132AQ24JP5 1023 aa8.92□□□□□ -0.98
CDH13-208ENST00000566333 SEZ6Q53EL9 994 aa8.92□□□□□ -0.98
CDH13-208ENST00000566333 FAM117BQ6P1L5 589 aa8.92□□□□□ -0.98
CDH13-208ENST00000566333 CRELD2Q6UXH1 353 aaPredicted RBP8.92□□□□□ -0.98
CDH13-208ENST00000566333 SPRED2Q7Z698 418 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms