RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 FAM26FQ5R3K3 315 aa11.68□□□□□ -0.54
UBFD1-205ENST00000566136 ATAT1Q5SQI0 421 aa11.68□□□□□ -0.54
UBFD1-205ENST00000566136 SCUBE1Q8IWY4 988 aa11.68□□□□□ -0.54
UBFD1-205ENST00000566136 CHST13Q8NET6 341 aa11.68□□□□□ -0.54
UBFD1-205ENST00000566136 HTRA1Q92743 480 aa11.68□□□□□ -0.54
UBFD1-205ENST00000566136 TMEM169Q96HH4 297 aa11.68□□□□□ -0.54
UBFD1-205ENST00000566136 LIN7BQ9HAP6 207 aa11.68□□□□□ -0.54
UBFD1-205ENST00000566136 GPN3Q9UHW5 284 aaPredicted RBP11.68□□□□□ -0.54
UBFD1-205ENST00000566136 CEP350Q5VT06 3117 aa11.68□□□□□ -0.54
UBFD1-205ENST00000566136 RNF113AO15541 343 aaKnown RBP11.68□□□□□ -0.54
UBFD1-205ENST00000566136 HSPD1P10809 573 aaKnown RBP11.68□□□□□ -0.54
UBFD1-205ENST00000566136 HNRNPLP14866 589 aaKnown RBP eCLIP11.68□□□□□ -0.54
UBFD1-205ENST00000566136 PHKA1P46020 1223 aa11.68□□□□□ -0.54
UBFD1-205ENST00000566136 SART3Q15020 963 aaKnown RBP11.68□□□□□ -0.54
UBFD1-205ENST00000566136 NEK10Q6ZWH5 1172 aa11.68□□□□□ -0.54
UBFD1-205ENST00000566136 CHST3Q7LGC8 479 aa11.68□□□□□ -0.54
UBFD1-205ENST00000566136 GTF3C6Q969F1 213 aa11.68□□□□□ -0.54
UBFD1-205ENST00000566136 PDLIM2Q96JY6 352 aa11.68□□□□□ -0.54
UBFD1-205ENST00000566136 GHITMQ9H3K2 345 aa11.68□□□□□ -0.54
UBFD1-205ENST00000566136 FAM204AQ9H8W3 233 aa11.68□□□□□ -0.54
UBFD1-205ENST00000566136 MKL2Q9ULH7 1088 aa11.68□□□□□ -0.54
UBFD1-205ENST00000566136 LAMA4Q16363 1823 aa11.68□□□□□ -0.54
UBFD1-205ENST00000566136 WDR64B1ANS9 1081 aa11.67□□□□□ -0.54
UBFD1-205ENST00000566136 ADRB2P07550 413 aa11.67□□□□□ -0.54
UBFD1-205ENST00000566136 VEGFBP49765 207 aa11.67□□□□□ -0.54
UBFD1-205ENST00000566136 YBEYP58557 167 aaPredicted RBP11.67□□□□□ -0.54
UBFD1-205ENST00000566136 ICA1Q05084 483 aa11.67□□□□□ -0.54
UBFD1-205ENST00000566136 PRKG1Q13976 671 aa11.67□□□□□ -0.54
UBFD1-205ENST00000566136 WSCD2Q2TBF2 565 aa11.67□□□□□ -0.54
UBFD1-205ENST00000566136 MXD3Q9BW11 206 aa11.67□□□□□ -0.54
UBFD1-205ENST00000566136 GREM2Q9H772 168 aa11.67□□□□□ -0.54
UBFD1-205ENST00000566136 COQ3Q9NZJ6 369 aa11.67□□□□□ -0.54
UBFD1-205ENST00000566136 ACKR2O00590 384 aa11.67□□□□□ -0.54
UBFD1-205ENST00000566136 CSTBP04080 98 aaKnown RBP11.67□□□□□ -0.54
UBFD1-205ENST00000566136 CCDC175P0C221 793 aa11.67□□□□□ -0.54
UBFD1-205ENST00000566136 PDCP20941 246 aa11.67□□□□□ -0.54
UBFD1-205ENST00000566136 TRIM28Q13263 835 aaKnown RBP11.67□□□□□ -0.54
UBFD1-205ENST00000566136 SETMARQ53H47 684 aaPredicted RBP11.67□□□□□ -0.54
UBFD1-205ENST00000566136 TBC1D9BQ66K14 1250 aa11.67□□□□□ -0.54
UBFD1-205ENST00000566136 TXNDC11Q6PKC3 985 aa11.67□□□□□ -0.54
UBFD1-205ENST00000566136 XKR5Q6UX68 686 aa11.67□□□□□ -0.54
UBFD1-205ENST00000566136 NPNTQ6UXI9 565 aa11.67□□□□□ -0.54
UBFD1-205ENST00000566136 LRRTM4Q86VH4 590 aa11.67□□□□□ -0.54
UBFD1-205ENST00000566136 NLRP10Q86W26 655 aa11.67□□□□□ -0.54
UBFD1-205ENST00000566136 ZNF227Q86WZ6 799 aa11.67□□□□□ -0.54
UBFD1-205ENST00000566136 C2orf69Q8N8R5 385 aa11.67□□□□□ -0.54
UBFD1-205ENST00000566136 ZKSCAN3Q9BRR0 538 aa11.67□□□□□ -0.54
UBFD1-205ENST00000566136 DACH1Q9UI36 760 aa11.67□□□□□ -0.54
UBFD1-205ENST00000566136 A0A0B4J203 849 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 IQCA1LA6NCM1 817 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 RRP9O43818 475 aaKnown RBP11.66□□□□□ -0.54
UBFD1-205ENST00000566136 MAN1A2O60476 641 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 ESRRAP11474 423 aaPredicted RBP11.66□□□□□ -0.54
UBFD1-205ENST00000566136 TRPC1P48995 793 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 CASP5P51878 434 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 IL1RL1Q01638 556 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 SCRN1Q12765 414 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 BLMHQ13867 455 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 RPUSD3Q6P087 351 aaKnown RBP11.66□□□□□ -0.54
UBFD1-205ENST00000566136 FAM117BQ6P1L5 589 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 FIP1L1Q6UN15 594 aaKnown RBP11.66□□□□□ -0.54
UBFD1-205ENST00000566136 CACNA2D3Q8IZS8 1091 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 BAG1Q99933 345 aaPredicted RBP11.66□□□□□ -0.54
UBFD1-205ENST00000566136 DSCC1Q9BVC3 393 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 CARMIL3Q8ND23 1372 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 CSF1RP07333 972 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 SELPP16109 830 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 MX2P20592 715 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 ITGA6P23229 1130 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 HAND2P61296 217 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 KRT85P78386 507 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 C19orf57Q0VDD7 668 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 METTL24Q5JXM2 366 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 MAP3K21Q5TCX8 1036 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 BROXQ5VW32 411 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 NUP54Q7Z3B4 507 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 SAPCD2Q86UD0 394 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 ERCC4Q92889 916 aaPredicted RBP11.66□□□□□ -0.54
UBFD1-205ENST00000566136 ADPGKQ9BRR6 497 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 TMEM120AQ9BXJ8 343 aa11.66□□□□□ -0.54
UBFD1-205ENST00000566136 ABI2Q9NYB9 513 aaPredicted RBP11.66□□□□□ -0.54
UBFD1-205ENST00000566136 E7EWF7 191 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 K7ESF4 209 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 GOSR1O95249 250 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 DESP17661 470 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 DMTNQ08495 405 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 NTRK3Q16288 839 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 DHX32Q7L7V1 743 aaKnown RBP11.65□□□□□ -0.54
UBFD1-205ENST00000566136 ZBTB8BQ8NAP8 495 aaPredicted RBP11.65□□□□□ -0.54
UBFD1-205ENST00000566136 FERMT2Q96AC1 680 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 TRIM11Q96F44 468 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 ALPK1Q96QP1 1244 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 PLA2G12BQ9BX93 195 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 EDARQ9UNE0 448 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 ITM2BQ9Y287 266 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 MRFAP1Q9Y605 127 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 RIC1Q4ADV7 1423 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 ARFGEF1Q9Y6D6 1849 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 KLHL33A6NCF5 533 aa11.65□□□□□ -0.54
UBFD1-205ENST00000566136 ATP4AP20648 1035 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms