RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 DYDC2Q96IM9 177 aa5.88□□□□□ -1.47
CHD9-215ENST00000565442 HIST1H2AHQ96KK5 128 aa5.88□□□□□ -1.47
CHD9-215ENST00000565442 HIST1H2AJQ99878 128 aa5.88□□□□□ -1.47
CHD9-215ENST00000565442 IFT122Q9HBG6 1241 aa5.88□□□□□ -1.47
CHD9-215ENST00000565442 ZNF277Q9NRM2 450 aaPredicted RBP5.88□□□□□ -1.47
CHD9-215ENST00000565442 PLA2G3Q9NZ20 509 aa5.88□□□□□ -1.47
CHD9-215ENST00000565442 Q9UFV3 132 aa5.88□□□□□ -1.47
CHD9-215ENST00000565442 EVLQ9UI08 416 aaPredicted RBP5.88□□□□□ -1.47
CHD9-215ENST00000565442 DNAI1Q9UI46 699 aa5.88□□□□□ -1.47
CHD9-215ENST00000565442 GIT1Q9Y2X7 761 aa5.88□□□□□ -1.47
CHD9-215ENST00000565442 CDY2AQ9Y6F7 541 aa5.88□□□□□ -1.47
CHD9-215ENST00000565442 IL33O95760 270 aa5.87□□□□□ -1.47
CHD9-215ENST00000565442 C5AR1P21730 350 aa5.87□□□□□ -1.47
CHD9-215ENST00000565442 BMP5P22003 454 aa5.87□□□□□ -1.47
CHD9-215ENST00000565442 FBLP22087 321 aaKnown RBP5.87□□□□□ -1.47
CHD9-215ENST00000565442 SLC5A3P53794 718 aa5.87□□□□□ -1.47
CHD9-215ENST00000565442 HHEXQ03014 270 aa5.87□□□□□ -1.47
CHD9-215ENST00000565442 TMEM200BQ69YZ2 307 aa5.87□□□□□ -1.47
CHD9-215ENST00000565442 SGMS1Q86VZ5 419 aa5.87□□□□□ -1.47
CHD9-215ENST00000565442 TMPRSS6Q8IU80 811 aa5.87□□□□□ -1.47
CHD9-215ENST00000565442 CMTR2Q8IYT2 770 aaKnown RBP5.87□□□□□ -1.47
CHD9-215ENST00000565442 BCL6BQ8N143 479 aaPredicted RBP5.87□□□□□ -1.47
CHD9-215ENST00000565442 HSPBAP1Q96EW2 488 aa5.87□□□□□ -1.47
CHD9-215ENST00000565442 ACE2Q9BYF1 805 aaPredicted RBP5.87□□□□□ -1.47
CHD9-215ENST00000565442 SLC2A4RGQ9NR83 387 aa5.87□□□□□ -1.47
CHD9-215ENST00000565442 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.87□□□□□ -1.47
CHD9-215ENST00000565442 PARPBPQ9NWS1 579 aa5.87□□□□□ -1.47
CHD9-215ENST00000565442 SAE1Q9UBE0 346 aaPredicted RBP5.87□□□□□ -1.47
CHD9-215ENST00000565442 SYNPO2Q9UMS6 1093 aa5.87□□□□□ -1.47
CHD9-215ENST00000565442 ANKRD6Q9Y2G4 727 aa5.87□□□□□ -1.47
CHD9-215ENST00000565442 A0A0A6YYK5 440 aaPredicted RBP5.86□□□□□ -1.47
CHD9-215ENST00000565442 FOXN1O15353 648 aa5.86□□□□□ -1.47
CHD9-215ENST00000565442 PRPF3O43395 683 aaKnown RBP5.86□□□□□ -1.47
CHD9-215ENST00000565442 NDUFS2O75306 463 aa5.86□□□□□ -1.47
CHD9-215ENST00000565442 MAFO75444 373 aaPredicted RBP5.86□□□□□ -1.47
CHD9-215ENST00000565442 ZRANB2O95218 330 aaKnown RBP eCLIP5.86□□□□□ -1.47
CHD9-215ENST00000565442 XPAP23025 273 aaPredicted RBP5.86□□□□□ -1.47
CHD9-215ENST00000565442 CSRP2Q16527 193 aa5.86□□□□□ -1.47
CHD9-215ENST00000565442 TMEM240Q5SV17 173 aa5.86□□□□□ -1.47
CHD9-215ENST00000565442 MBNL2Q5VZF2 373 aaKnown RBP5.86□□□□□ -1.47
CHD9-215ENST00000565442 MYO1HQ8N1T3 1032 aa5.86□□□□□ -1.47
CHD9-215ENST00000565442 RSAD2Q8WXG1 361 aa5.86□□□□□ -1.47
CHD9-215ENST00000565442 FDXACB1Q9BRP7 624 aaPredicted RBP5.86□□□□□ -1.47
CHD9-215ENST00000565442 SOX7Q9BT81 388 aa5.86□□□□□ -1.47
CHD9-215ENST00000565442 KIAA1683Q9H0B3 1180 aa5.86□□□□□ -1.47
CHD9-215ENST00000565442 TCF7L1Q9HCS4 588 aa5.86□□□□□ -1.47
CHD9-215ENST00000565442 POLR3BQ9NW08 1133 aaPredicted RBP5.86□□□□□ -1.47
CHD9-215ENST00000565442 TUBD1Q9UJT1 453 aa5.86□□□□□ -1.47
CHD9-215ENST00000565442 FBXO10Q9UK96 956 aa5.86□□□□□ -1.47
CHD9-215ENST00000565442 KRTAP23-1A1A580 65 aa5.85□□□□□ -1.47
CHD9-215ENST00000565442 RFPL1O75677 317 aa5.85□□□□□ -1.47
CHD9-215ENST00000565442 PEX11BO96011 259 aa5.85□□□□□ -1.47
CHD9-215ENST00000565442 HMGCRP04035 888 aa5.85□□□□□ -1.47
CHD9-215ENST00000565442 GPR15P49685 360 aa5.85□□□□□ -1.47
CHD9-215ENST00000565442 MGAT5Q09328 741 aa5.85□□□□□ -1.47
CHD9-215ENST00000565442 TCIRG1Q13488 830 aa5.85□□□□□ -1.47
CHD9-215ENST00000565442 EIF4HQ15056 248 aaKnown RBP5.85□□□□□ -1.47
CHD9-215ENST00000565442 CCDC142Q17RM4 750 aa5.85□□□□□ -1.47
CHD9-215ENST00000565442 HSP90AB2PQ58FF8 381 aa5.85□□□□□ -1.47
CHD9-215ENST00000565442 C14orf80Q86SX3 495 aa5.85□□□□□ -1.47
CHD9-215ENST00000565442 SSH1Q8WYL5 1049 aa5.85□□□□□ -1.47
CHD9-215ENST00000565442 CAMKK2Q96RR4 588 aa5.85□□□□□ -1.47
CHD9-215ENST00000565442 HAPLN2Q9GZV7 340 aa5.85□□□□□ -1.47
CHD9-215ENST00000565442 TMEM191CA6NGB0 347 aa5.84□□□□□ -1.47
CHD9-215ENST00000565442 CAPN14A8MX76 684 aa5.84□□□□□ -1.47
CHD9-215ENST00000565442 NRP2O60462 931 aa5.84□□□□□ -1.47
CHD9-215ENST00000565442 HNRNPLP14866 589 aaKnown RBP eCLIP5.84□□□□□ -1.47
CHD9-215ENST00000565442 NRG3P56975 720 aa5.84□□□□□ -1.47
CHD9-215ENST00000565442 KIF23Q02241 960 aaPredicted RBP5.84□□□□□ -1.47
CHD9-215ENST00000565442 CD69Q07108 199 aa5.84□□□□□ -1.47
CHD9-215ENST00000565442 GRM7Q14831 915 aa5.84□□□□□ -1.47
CHD9-215ENST00000565442 MLC1Q15049 377 aa5.84□□□□□ -1.47
CHD9-215ENST00000565442 ADRM1Q16186 407 aa5.84□□□□□ -1.47
CHD9-215ENST00000565442 CCDC178Q5BJE1 867 aa5.84□□□□□ -1.47
CHD9-215ENST00000565442 FAM102BQ5T8I3 360 aa5.84□□□□□ -1.47
CHD9-215ENST00000565442 LMBR1LQ6UX01 489 aa5.84□□□□□ -1.47
CHD9-215ENST00000565442 USP30Q70CQ3 517 aa5.84□□□□□ -1.47
CHD9-215ENST00000565442 NOL8Q76FK4 1167 aaKnown RBP5.84□□□□□ -1.47
CHD9-215ENST00000565442 ADGRE4PQ86SQ3 457 aa5.84□□□□□ -1.47
CHD9-215ENST00000565442 GPR135Q8IZ08 494 aa5.84□□□□□ -1.47
CHD9-215ENST00000565442 RTKN2Q8IZC4 609 aa5.84□□□□□ -1.47
CHD9-215ENST00000565442 THEMISQ8N1K5 641 aaPredicted RBP5.84□□□□□ -1.47
CHD9-215ENST00000565442 MIER2Q8N344 545 aa5.84□□□□□ -1.47
CHD9-215ENST00000565442 LRGUKQ96M69 825 aa5.84□□□□□ -1.47
CHD9-215ENST00000565442 WDR92Q96MX6 357 aa5.84□□□□□ -1.47
CHD9-215ENST00000565442 NELFAQ9H3P2 528 aa5.84□□□□□ -1.47
CHD9-215ENST00000565442 DMRT3Q9NQL9 472 aa5.84□□□□□ -1.47
CHD9-215ENST00000565442 ZBTB21Q9ULJ3 1066 aa5.84□□□□□ -1.47
CHD9-215ENST00000565442 CYP27B1O15528 508 aa5.83□□□□□ -1.48
CHD9-215ENST00000565442 SEC24DO94855 1032 aaPredicted RBP5.83□□□□□ -1.48
CHD9-215ENST00000565442 ATF3P18847 181 aa5.83□□□□□ -1.48
CHD9-215ENST00000565442 FSTL1Q12841 308 aa5.83□□□□□ -1.48
CHD9-215ENST00000565442 MALLQ13021 153 aa5.83□□□□□ -1.48
CHD9-215ENST00000565442 LARP4Q71RC2 724 aaKnown RBP eCLIP5.83□□□□□ -1.48
CHD9-215ENST00000565442 GLB1L2Q8IW92 636 aa5.83□□□□□ -1.48
CHD9-215ENST00000565442 D2HGDHQ8N465 521 aa5.83□□□□□ -1.48
CHD9-215ENST00000565442 GLB1L3Q8NCI6 653 aaPredicted RBP5.83□□□□□ -1.48
CHD9-215ENST00000565442 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.83□□□□□ -1.48
CHD9-215ENST00000565442 FATE1Q969F0 183 aa5.83□□□□□ -1.48
CHD9-215ENST00000565442 HECAQ9UBI9 543 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms