RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 CDCA3Q99618 268 aaPredicted RBP15.03■□□□□ -0
VPS9D1-204ENST00000565023 ZBP1Q9H171 429 aa15.03■□□□□ -0
VPS9D1-204ENST00000565023 FZD8Q9H461 694 aa15.03■□□□□ -0
VPS9D1-204ENST00000565023 PDZD7Q9H5P4 517 aa15.03■□□□□ -0
VPS9D1-204ENST00000565023 SNTG2Q9NY99 539 aa15.03■□□□□ -0
VPS9D1-204ENST00000565023 CACNG4Q9UBN1 327 aa15.03■□□□□ -0
VPS9D1-204ENST00000565023 SRGAP2BP0DMP2 458 aa15.02■□□□□ -0
VPS9D1-204ENST00000565023 CEBPZQ03701 1054 aaKnown RBP15.02■□□□□ -0
VPS9D1-204ENST00000565023 GRIN1Q05586 938 aa15.02■□□□□ -0
VPS9D1-204ENST00000565023 DDX53Q86TM3 631 aaKnown RBP15.02■□□□□ -0
VPS9D1-204ENST00000565023 COLGALT2Q8IYK4 626 aa15.02■□□□□ -0
VPS9D1-204ENST00000565023 MRPL43Q8N983 215 aaKnown RBP15.02■□□□□ -0
VPS9D1-204ENST00000565023 ADPGKQ9BRR6 497 aa15.02■□□□□ -0
VPS9D1-204ENST00000565023 TMEM175Q9BSA9 504 aa15.02■□□□□ -0
VPS9D1-204ENST00000565023 VN1R3Q9BXE9 311 aa15.02■□□□□ -0
VPS9D1-204ENST00000565023 CCDC113Q9H0I3 377 aa15.02■□□□□ -0
VPS9D1-204ENST00000565023 GDAQ9Y2T3 454 aa15.02■□□□□ -0
VPS9D1-204ENST00000565023 GIT1Q9Y2X7 761 aa15.02■□□□□ -0
VPS9D1-204ENST00000565023 USP15Q9Y4E8 981 aaPredicted RBP15.02■□□□□ -0
VPS9D1-204ENST00000565023 NPHP3-ACAD11A0A0J9YXS1 232 aa15.01□□□□□ -0.01
VPS9D1-204ENST00000565023 F8W810 466 aa15.01□□□□□ -0.01
VPS9D1-204ENST00000565023 K7ERI5 159 aa15.01□□□□□ -0.01
VPS9D1-204ENST00000565023 ACKR2O00590 384 aa15.01□□□□□ -0.01
VPS9D1-204ENST00000565023 CLASP2O75122 1294 aaKnown RBP15.01□□□□□ -0.01
VPS9D1-204ENST00000565023 ZP2Q05996 745 aa15.01□□□□□ -0.01
VPS9D1-204ENST00000565023 DMP1Q13316 513 aaPredicted RBP15.01□□□□□ -0.01
VPS9D1-204ENST00000565023 BECN1Q14457 450 aa15.01□□□□□ -0.01
VPS9D1-204ENST00000565023 SMAD2Q15796 467 aaKnown RBP15.01□□□□□ -0.01
VPS9D1-204ENST00000565023 FAM187BQ17R55 369 aa15.01□□□□□ -0.01
VPS9D1-204ENST00000565023 ARL6IP4Q66PJ3 421 aaKnown RBP15.01□□□□□ -0.01
VPS9D1-204ENST00000565023 DAW1Q8N136 415 aa15.01□□□□□ -0.01
VPS9D1-204ENST00000565023 SPRYD3Q8NCJ5 442 aa15.01□□□□□ -0.01
VPS9D1-204ENST00000565023 NT5C3AQ9H0P0 336 aa15.01□□□□□ -0.01
VPS9D1-204ENST00000565023 ZSCAN16Q9H4T2 348 aaPredicted RBP15.01□□□□□ -0.01
VPS9D1-204ENST00000565023 KMT5AQ9NQR1 393 aa15.01□□□□□ -0.01
VPS9D1-204ENST00000565023 MARCH5Q9NX47 278 aa15.01□□□□□ -0.01
VPS9D1-204ENST00000565023 CDH22Q9UJ99 828 aa15.01□□□□□ -0.01
VPS9D1-204ENST00000565023 HCFC2Q9Y5Z7 792 aa15.01□□□□□ -0.01
VPS9D1-204ENST00000565023 CLIC4Q9Y696 253 aa15.01□□□□□ -0.01
VPS9D1-204ENST00000565023 FAM86C2PA6NEL3 165 aa15□□□□□ -0.01
VPS9D1-204ENST00000565023 SPDYE4A6NLX3 237 aa15□□□□□ -0.01
VPS9D1-204ENST00000565023 SLC16A4O15374 487 aa15□□□□□ -0.01
VPS9D1-204ENST00000565023 NR1I2O75469 434 aa15□□□□□ -0.01
VPS9D1-204ENST00000565023 RECQL4O94761 1208 aa15□□□□□ -0.01
VPS9D1-204ENST00000565023 PLA2G4BP0C869 781 aa15□□□□□ -0.01
VPS9D1-204ENST00000565023 MYBP10242 640 aa15□□□□□ -0.01
VPS9D1-204ENST00000565023 CTSAP10619 480 aa15□□□□□ -0.01
VPS9D1-204ENST00000565023 HARSP12081 509 aaKnown RBP15□□□□□ -0.01
VPS9D1-204ENST00000565023 SP100P23497 879 aaPredicted RBP15□□□□□ -0.01
VPS9D1-204ENST00000565023 MARCKSP29966 332 aaPredicted RBP15□□□□□ -0.01
VPS9D1-204ENST00000565023 UBA7P41226 1012 aa15□□□□□ -0.01
VPS9D1-204ENST00000565023 NPTX2P47972 431 aa15□□□□□ -0.01
VPS9D1-204ENST00000565023 COASYQ13057 564 aa15□□□□□ -0.01
VPS9D1-204ENST00000565023 MAPK7Q13164 816 aa15□□□□□ -0.01
VPS9D1-204ENST00000565023 SPECC1Q5M775 1068 aa15□□□□□ -0.01
VPS9D1-204ENST00000565023 NT5DC1Q5TFE4 455 aa15□□□□□ -0.01
VPS9D1-204ENST00000565023 ATF7IP2Q5U623 682 aa15□□□□□ -0.01
VPS9D1-204ENST00000565023 ANKRD54Q6NXT1 300 aa15□□□□□ -0.01
VPS9D1-204ENST00000565023 C1orf186Q6ZWK4 172 aa15□□□□□ -0.01
VPS9D1-204ENST00000565023 ZBTB33Q86T24 672 aa15□□□□□ -0.01
VPS9D1-204ENST00000565023 ADHFE1Q8IWW8 467 aa15□□□□□ -0.01
VPS9D1-204ENST00000565023 SMRP1Q8NCR6 262 aa15□□□□□ -0.01
VPS9D1-204ENST00000565023 CALML4Q96GE6 196 aa15□□□□□ -0.01
VPS9D1-204ENST00000565023 DRC1Q96MC2 740 aa15□□□□□ -0.01
VPS9D1-204ENST00000565023 CXCL16Q9H2A7 254 aa15□□□□□ -0.01
VPS9D1-204ENST00000565023 FSD2A1L4K1 749 aa14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 CARNS1A5YM72 827 aa14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 CASTOR2A6NHX0 329 aa14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 BMP15O95972 392 aa14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 EPCAMP16422 314 aa14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 EFNA5P52803 228 aa14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 OSTNP61366 133 aa14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 GRIK3Q13003 919 aa14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 KARSQ15046 597 aaKnown RBP14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 PTPN14Q15678 1187 aa14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 TMEM119Q4V9L6 283 aa14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 GLRA4Q5JXX5 417 aa14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 HYIQ5T013 277 aa14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 FOXD4L5Q5VV16 416 aaPredicted RBP14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 KANK3Q6NY19 840 aa14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 TAS1R1Q7RTX1 841 aa14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 C12orf76Q8N812 135 aaPredicted RBP14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 SYT2Q8N9I0 419 aaPredicted RBP14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 HASPINQ8TF76 798 aa14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 FOXD4L4Q8WXT5 416 aaPredicted RBP14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 CASP10Q92851 521 aa14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 RPGRIP1Q96KN7 1286 aa14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 B3GALT6Q96L58 329 aa14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 TARS2Q9BW92 718 aaKnown RBP14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 COLEC11Q9BWP8 271 aa14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 C1QTNF1Q9BXJ1 281 aa14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 PRKAG3Q9UGI9 489 aa14.99□□□□□ -0.01
VPS9D1-204ENST00000565023 PHLPP2Q6ZVD8 1323 aa14.98□□□□□ -0.01
VPS9D1-204ENST00000565023 PLXNA3P51805 1871 aa14.98□□□□□ -0.01
VPS9D1-204ENST00000565023 URODP06132 367 aa14.98□□□□□ -0.01
VPS9D1-204ENST00000565023 WEE2P0C1S8 567 aa14.98□□□□□ -0.01
VPS9D1-204ENST00000565023 ZSCAN22P10073 491 aaPredicted RBP14.98□□□□□ -0.01
VPS9D1-204ENST00000565023 PLCG1P19174 1290 aa14.98□□□□□ -0.01
VPS9D1-204ENST00000565023 KLRC2P26717 231 aa14.98□□□□□ -0.01
VPS9D1-204ENST00000565023 SLC12A3P55017 1021 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms