RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 PPP1R14DQ9NXH3 145 aa6.69□□□□□ -1.34
PTPN9-204ENST00000564970 MAP3K20Q9NYL2 800 aaKnown RBP6.69□□□□□ -1.34
PTPN9-204ENST00000564970 STMN3Q9NZ72 180 aa6.69□□□□□ -1.34
PTPN9-204ENST00000564970 SELENONQ9NZV5 590 aa6.69□□□□□ -1.34
PTPN9-204ENST00000564970 EMC3Q9P0I2 261 aa6.69□□□□□ -1.34
PTPN9-204ENST00000564970 ADD3Q9UEY8 706 aaKnown RBP6.69□□□□□ -1.34
PTPN9-204ENST00000564970 KCNN3Q9UGI6 736 aa6.69□□□□□ -1.34
PTPN9-204ENST00000564970 SEPT3Q9UH03 358 aa6.69□□□□□ -1.34
PTPN9-204ENST00000564970 DMGDHQ9UI17 866 aaKnown RBP6.69□□□□□ -1.34
PTPN9-204ENST00000564970 HPSEQ9Y251 543 aa6.69□□□□□ -1.34
PTPN9-204ENST00000564970 DNAJC16Q9Y2G8 782 aa6.69□□□□□ -1.34
PTPN9-204ENST00000564970 DIS3Q9Y2L1 958 aaKnown RBP6.69□□□□□ -1.34
PTPN9-204ENST00000564970 RRP7AQ9Y3A4 280 aaKnown RBP6.69□□□□□ -1.34
PTPN9-204ENST00000564970 NOC2LQ9Y3T9 749 aaKnown RBP6.69□□□□□ -1.34
PTPN9-204ENST00000564970 PITPNM2Q9BZ72 1349 aa6.69□□□□□ -1.34
PTPN9-204ENST00000564970 UNC13BO14795 1591 aa6.69□□□□□ -1.34
PTPN9-204ENST00000564970 DIP2AQ14689 1571 aa6.69□□□□□ -1.34
PTPN9-204ENST00000564970 QRICH2Q9H0J4 1663 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 MLH3Q9UHC1 1453 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 ITSN1Q15811 1721 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 BHMG1C9JSJ3 638 aaPredicted RBP6.68□□□□□ -1.34
PTPN9-204ENST00000564970 APBB1O00213 710 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 KPNA4O00629 521 aaPredicted RBP6.68□□□□□ -1.34
PTPN9-204ENST00000564970 PEX1O43933 1283 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 PDE8AO60658 829 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 CCDC22O60826 627 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 GPC4O75487 556 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 RNASEH2AO75792 299 aaKnown RBP6.68□□□□□ -1.34
PTPN9-204ENST00000564970 HEXIM1O94992 359 aaKnown RBP6.68□□□□□ -1.34
PTPN9-204ENST00000564970 SLC34A2O95436 690 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 CHEK2O96017 543 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 ATP5BP06576 529 aaKnown RBP6.68□□□□□ -1.34
PTPN9-204ENST00000564970 LDHCP07864 332 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 ABCB1P08183 1280 aaPredicted RBP6.68□□□□□ -1.34
PTPN9-204ENST00000564970 P4HA1P13674 534 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 RASA1P20936 1047 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 IL10P22301 178 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 CFL1P23528 166 aaKnown RBP6.68□□□□□ -1.34
PTPN9-204ENST00000564970 IFNA8P32881 189 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 TTKP33981 857 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 HSD17B3P37058 310 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 HSPA13P48723 471 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 RGS7P49802 495 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 NDUFA8P51970 172 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 CHN2P52757 468 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 NR1H2P55055 460 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 GNG2P59768 71 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 MAGOHP61326 146 aaKnown RBP6.68□□□□□ -1.34
PTPN9-204ENST00000564970 COG7P83436 770 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 TFAP4Q01664 338 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 PDE4DQ08499 809 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 MRPL28Q13084 256 aaKnown RBP6.68□□□□□ -1.34
PTPN9-204ENST00000564970 CYTH1Q15438 398 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 TSC22D1Q15714 1073 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 MEA1Q16626 185 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 KLHL38Q2WGJ6 581 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 USP41Q3LFD5 358 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 C10orf76Q5T2E6 689 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 EFCAB2Q5VUJ9 269 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 MFSD5Q6N075 450 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 FAM171BQ6P995 826 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 C4orf22Q6V702 233 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 HAUS6Q7Z4H7 955 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 ADAMTSL2Q86TH1 951 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 DCP2Q8IU60 420 aaKnown RBP6.68□□□□□ -1.34
PTPN9-204ENST00000564970 TMEM126BQ8IUX1 230 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 C16orf71Q8IYS4 520 aaPredicted RBP6.68□□□□□ -1.34
PTPN9-204ENST00000564970 CADM3Q8N126 398 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 ADSSL1Q8N142 457 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 PCYOX1LQ8NBM8 494 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 RNF169Q8NCN4 708 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 PDZD8Q8NEN9 1154 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 CEP70Q8NHQ1 597 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 SLC2A14Q8TDB8 520 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 LPIN2Q92539 896 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 RILPL2Q969X0 211 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 MAGOHBQ96A72 148 aaKnown RBP6.68□□□□□ -1.34
PTPN9-204ENST00000564970 C7orf26Q96N11 449 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 RPRD1AQ96P16 312 aaPredicted RBP6.68□□□□□ -1.34
PTPN9-204ENST00000564970 TSG101Q99816 390 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 MYD88Q99836 296 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 ELAC2Q9BQ52 826 aaKnown RBP6.68□□□□□ -1.34
PTPN9-204ENST00000564970 ECSITQ9BQ95 431 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 NEURL2Q9BR09 285 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 PYM1Q9BRP8 204 aaKnown RBP6.68□□□□□ -1.34
PTPN9-204ENST00000564970 GPATCH1Q9BRR8 931 aaKnown RBP6.68□□□□□ -1.34
PTPN9-204ENST00000564970 ROPN1BQ9BZX4 212 aaPredicted RBP6.68□□□□□ -1.34
PTPN9-204ENST00000564970 CCDC113Q9H0I3 377 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 TRPV6Q9H1D0 765 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 TMEM60Q9H2L4 133 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 SMARCAD1Q9H4L7 1026 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 RUBCNLQ9H714 662 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 ROPN1Q9HAT0 212 aaPredicted RBP6.68□□□□□ -1.34
PTPN9-204ENST00000564970 AASDHPPTQ9NRN7 309 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 ABCF3Q9NUQ8 709 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 C9orf78Q9NZ63 289 aaPredicted RBP6.68□□□□□ -1.34
PTPN9-204ENST00000564970 IGSF9Q9P2J2 1179 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 NKX1-2Q9UD57 310 aaPredicted RBP6.68□□□□□ -1.34
PTPN9-204ENST00000564970 KIAA1257Q9ULG3 409 aa6.68□□□□□ -1.34
PTPN9-204ENST00000564970 GUCA1BQ9UMX6 200 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms