RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 HERVK_113P62684 666 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 MRPS9P82933 396 aaKnown RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 PURAQ00577 322 aaKnown RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 MAP2K1Q02750 393 aaPredicted RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 C16orf72Q14CZ0 275 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 CBWD6Q4V339 395 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 CBWD3Q5JTY5 395 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 GLRA4Q5JXX5 417 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 CBWD5Q5RIA9 395 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 NT5DC1Q5TFE4 455 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 SLFN12Q8IYM2 578 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 FOXP3Q9BZS1 431 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 TRIM9Q9C026 710 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 INO80BQ9C086 356 aaPredicted RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 COA1Q9GZY4 146 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 TXNRD2Q9NNW7 524 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 ABHD10Q9NUJ1 306 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 PNMA3Q9UL41 463 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 ITGB5P18084 799 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 HOXD13P35453 343 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 IL31Q6EBC2 164 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 SNRNP48Q6IEG0 339 aaKnown RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 CACNA2D4Q7Z3S7 1137 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 MAATS1Q7Z4T9 603 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 CACNA2D3Q8IZS8 1091 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 METTL13Q8N6R0 699 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 CEP120Q8N960 986 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 RAD54LQ92698 747 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 CPB2Q96IY4 423 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 EPAS1Q99814 870 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 NDEL1Q9GZM8 345 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 PPP1R12AO14974 1030 aaPredicted RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 TNFSF9P41273 254 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 RAP1GAPP47736 663 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 COPB1P53618 953 aaKnown RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 PAN2Q504Q3 1202 aaKnown RBP3.6□□□□□ -1.83
CHD9-213ENST00000564845 LIN9Q5TKA1 542 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 SV2BQ7L1I2 683 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 MFN1Q8IWA4 741 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 MIPOL1Q8TD10 442 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 MMS19Q96T76 1030 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 UBAP1Q9NZ09 502 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 UBR3Q6ZT12 1888 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 CDK5RAP2Q96SN8 1893 aa3.6□□□□□ -1.83
CHD9-213ENST00000564845 CTAGE9A4FU28 777 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 ANKRD63C9JTQ0 380 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 PDE2AO00408 941 aaPredicted RBP3.59□□□□□ -1.83
CHD9-213ENST00000564845 LDHAP00338 332 aaKnown RBP3.59□□□□□ -1.83
CHD9-213ENST00000564845 NR2F2P24468 414 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 RAB6CQ53S08 254 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 DALRD3Q5D0E6 543 aaKnown RBP3.59□□□□□ -1.83
CHD9-213ENST00000564845 TRIM65Q6PJ69 517 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 VSTM4Q8IW00 320 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 PNPLA1Q8N8W4 532 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 RAB6CQ9H0N0 254 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 TRPC7Q9HCX4 862 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 VPS9D1Q9Y2B5 631 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 AXIN1O15169 862 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 TBCAO75347 108 aaKnown RBP3.59□□□□□ -1.83
CHD9-213ENST00000564845 PLA2G4BP0C869 781 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 ZNF286BP0CG31 522 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 ZNF18P17022 549 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 VCAM1P19320 739 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 NR1I3Q14994 352 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 SYCP3Q8IZU3 236 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 NDUFAF2Q8N183 169 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 IQUBQ8NA54 791 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 TRIM58Q8NG06 486 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 PIP4K2CQ8TBX8 421 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 RBM46Q8TBY0 533 aaKnown RBP3.59□□□□□ -1.83
CHD9-213ENST00000564845 DHX36Q9H2U1 1008 aaKnown RBP3.59□□□□□ -1.83
CHD9-213ENST00000564845 EFCC1Q9HA90 598 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 KCNH7Q9NS40 1196 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 ZNF212Q9UDV6 495 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 PGAP2Q9UHJ9 254 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 ATMQ13315 3056 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 SPATA31A6Q5VVP1 1343 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 SPATA31C1P0DKV0 1188 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 CYP2C19P33261 490 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 CXCR3P49682 368 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 MED21Q13503 144 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 MIIPQ5JXC2 388 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 LRCH2Q5VUJ6 765 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 FYB2Q5VWT5 728 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 TMCO2Q7Z6W1 182 aaPredicted RBP3.59□□□□□ -1.83
CHD9-213ENST00000564845 HASPINQ8TF76 798 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 SIKE1Q9BRV8 207 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 ZMYND12Q9H0C1 365 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 DOCK5Q9H7D0 1870 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 ACSS2Q9NR19 701 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 PIM2Q9P1W9 311 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 LUC7L2Q9Y383 392 aaKnown RBP3.59□□□□□ -1.83
CHD9-213ENST00000564845 LPXNO60711 386 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 SLITRK3O94933 977 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 ADAM9Q13443 819 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 C4orf22Q6V702 233 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 SLC20A1Q8WUM9 679 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 TTC17Q96AE7 1141 aa3.59□□□□□ -1.83
CHD9-213ENST00000564845 LSM14BQ9BX40 385 aaKnown RBP3.59□□□□□ -1.83
CHD9-213ENST00000564845 RRAGCQ9HB90 399 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms