RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 CCDC112Q8NEF3 446 aa12.24□□□□□ -0.45
SNX29-204ENST00000564791 SH3TC2Q8TF17 1288 aa12.24□□□□□ -0.45
SNX29-204ENST00000564791 IQCDQ96DY2 449 aa12.24□□□□□ -0.45
SNX29-204ENST00000564791 CCDC51Q96ER9 411 aa12.24□□□□□ -0.45
SNX29-204ENST00000564791 TMX1Q9H3N1 280 aa12.24□□□□□ -0.45
SNX29-204ENST00000564791 KIAA1586Q9HCI6 787 aa12.24□□□□□ -0.45
SNX29-204ENST00000564791 ABHD10Q9NUJ1 306 aa12.24□□□□□ -0.45
SNX29-204ENST00000564791 GCNT4Q9P109 453 aa12.24□□□□□ -0.45
SNX29-204ENST00000564791 LUC7L2Q9Y383 392 aaKnown RBP12.24□□□□□ -0.45
SNX29-204ENST00000564791 CNTNAP2Q9UHC6 1331 aa12.24□□□□□ -0.45
SNX29-204ENST00000564791 ANK1P16157 1881 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 A0A1W2PQJ5 194 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 GTPBP10A4D1E9 387 aaKnown RBP12.23□□□□□ -0.45
SNX29-204ENST00000564791 LRRIQ3A6PVS8 624 aaPredicted RBP12.23□□□□□ -0.45
SNX29-204ENST00000564791 FAM189A1O60320 539 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 NOL4O94818 638 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 ACTN1P12814 892 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 SLC9A1P19634 815 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 MSNP26038 577 aaKnown RBP12.23□□□□□ -0.45
SNX29-204ENST00000564791 MCL1Q07820 350 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 PPP3CAQ08209 521 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 NOLC1Q14978 699 aaKnown RBP eCLIP12.23□□□□□ -0.45
SNX29-204ENST00000564791 EXOC3L4Q17RC7 722 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 ZNF568Q3ZCX4 644 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 FAM47CQ5HY64 1035 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 LHX8Q68G74 356 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 GDF6Q6KF10 455 aaPredicted RBP12.23□□□□□ -0.45
SNX29-204ENST00000564791 DPY19L2P1Q6NXN4 242 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 CDR2LQ86X02 465 aaPredicted RBP12.23□□□□□ -0.45
SNX29-204ENST00000564791 TMC2Q8TDI7 906 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 PARD3BQ8TEW8 1205 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 CCDC127Q96BQ5 260 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 PRIMPOLQ96LW4 560 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 TCHPQ9BT92 498 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 GANQ9H2C0 597 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 CDHR5Q9HBB8 845 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 PTPRHQ9HD43 1115 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 TOPORSQ9NS56 1045 aaPredicted RBP12.23□□□□□ -0.45
SNX29-204ENST00000564791 AGPAT5Q9NUQ2 364 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 GINS2Q9Y248 185 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 TNFSF13BQ9Y275 285 aa12.23□□□□□ -0.45
SNX29-204ENST00000564791 TULP1O00294 542 aaPredicted RBP12.22□□□□□ -0.45
SNX29-204ENST00000564791 NRDCO43847 1150 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 TSPAN1O60635 241 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 LDHAP00338 332 aaKnown RBP12.22□□□□□ -0.45
SNX29-204ENST00000564791 FGFR4P22455 802 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 PON1P27169 355 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 GCLMP48507 274 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 ACLYP53396 1101 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 ZBED6P86452 979 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 CDC42EP1Q00587 391 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 HSP90AA2PQ14568 343 aaPredicted RBP12.22□□□□□ -0.45
SNX29-204ENST00000564791 PSMD6Q15008 389 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 SEZ6Q53EL9 994 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 C17orf53Q8N3J3 647 aaPredicted RBP12.22□□□□□ -0.45
SNX29-204ENST00000564791 KIAA1524Q8TCG1 905 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 CPB2Q96IY4 423 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 DNAJC7Q99615 494 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 OSMRQ99650 979 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 BAG1Q99933 345 aaPredicted RBP12.22□□□□□ -0.45
SNX29-204ENST00000564791 GCOM2Q9BZD3 368 aaPredicted RBP12.22□□□□□ -0.45
SNX29-204ENST00000564791 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.22□□□□□ -0.45
SNX29-204ENST00000564791 CDT1Q9H211 546 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 PDZD7Q9H5P4 517 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 SIX2Q9NPC8 291 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 PLCB1Q9NQ66 1216 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 RBAKQ9NYW8 714 aaPredicted RBP12.22□□□□□ -0.45
SNX29-204ENST00000564791 PTPN22Q9Y2R2 807 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 GRIN2DO15399 1336 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 OGTO15294 1046 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 STX10O60499 249 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 N4BP1O75113 896 aaKnown RBP12.22□□□□□ -0.45
SNX29-204ENST00000564791 ERLIN2O94905 339 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 DLATP10515 647 aaKnown RBP12.22□□□□□ -0.45
SNX29-204ENST00000564791 DARSP14868 501 aaKnown RBP12.22□□□□□ -0.45
SNX29-204ENST00000564791 ARF4P18085 180 aaPredicted RBP12.22□□□□□ -0.45
SNX29-204ENST00000564791 FECHP22830 423 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 TNFSF9P41273 254 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 MXI1P50539 228 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 WNT7BP56706 349 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 ENPEPQ07075 957 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 TAF2Q6P1X5 1199 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 SESTD1Q86VW0 696 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 OR8K1Q8NGG5 319 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 BAP1Q92560 729 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 POP1Q99575 1024 aaKnown RBP12.22□□□□□ -0.45
SNX29-204ENST00000564791 EDEM3Q9BZQ6 932 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 TMEM117Q9H0C3 514 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 INTS2Q9H0H0 1204 aaKnown RBP12.22□□□□□ -0.45
SNX29-204ENST00000564791 UNC93B1Q9H1C4 597 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 NLRC4Q9NPP4 1024 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 CEP72Q9P209 647 aa12.22□□□□□ -0.45
SNX29-204ENST00000564791 P4HA2O15460 535 aa12.21□□□□□ -0.46
SNX29-204ENST00000564791 CABYRO75952 493 aa12.21□□□□□ -0.46
SNX29-204ENST00000564791 POLR2FP61218 127 aaKnown RBP12.21□□□□□ -0.46
SNX29-204ENST00000564791 EPC2Q52LR7 807 aa12.21□□□□□ -0.46
SNX29-204ENST00000564791 KLHDC7AQ5VTJ3 777 aa12.21□□□□□ -0.46
SNX29-204ENST00000564791 PDXDC1Q6P996 788 aa12.21□□□□□ -0.46
SNX29-204ENST00000564791 TRIM65Q6PJ69 517 aa12.21□□□□□ -0.46
SNX29-204ENST00000564791 CACNA2D4Q7Z3S7 1137 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms