RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 ADH1AP07327 375 aa13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 CNPP09543 421 aaKnown RBP13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 EPCAMP16422 314 aa13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 MLH1P40692 756 aa13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 NAMPTP43490 491 aa13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 EFNA5P52803 228 aa13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 NUBP1P53384 320 aa13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 FOSBP53539 338 aa13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 CREMQ03060 361 aa13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 MAPK6Q16659 721 aa13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 RARS2Q5T160 578 aaKnown RBP13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 KIAA0319Q5VV43 1072 aa13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 PADI6Q6TGC4 694 aa13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 GPR149Q86SP6 731 aa13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 SUGP1Q8IWZ8 645 aaKnown RBP13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 RNF168Q8IYW5 571 aaPredicted RBP13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 FBXL6Q8N531 539 aa13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 MIOSQ9NXC5 875 aa13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 KIF3AQ9Y496 699 aa13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 HES2Q9Y543 173 aa13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 ARID2Q68CP9 1835 aa13.48□□□□□ -0.25
GTF3C1-204ENST00000564664 N4BP3O15049 544 aa13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 GLUD2P49448 558 aa13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 SCNN1GP51170 649 aa13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 DSG1Q02413 1049 aa13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 GRIK3Q13003 919 aa13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 MTMR3Q13615 1198 aa13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 USP41Q3LFD5 358 aa13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 OTOP3Q7RTS5 596 aa13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 APBB1IPQ7Z5R6 666 aaPredicted RBP13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 ZBTB33Q86T24 672 aa13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 KCTD17Q8N5Z5 321 aa13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 C4orf32Q8N8J7 132 aa13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 GSTCDQ8NEC7 633 aa13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 KIFAP3Q92845 792 aa13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 ACSF2Q96CM8 615 aaPredicted RBP13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 IFT74Q96LB3 600 aa13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 KIF2CQ99661 725 aa13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 ADPGKQ9BRR6 497 aa13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 IRF2BPLQ9H1B7 796 aa13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 TSHZ2Q9NRE2 1034 aa13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 CHST7Q9NS84 486 aa13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 MARCH5Q9NX47 278 aa13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 LRWD1Q9UFC0 647 aa13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 SORCS3Q9UPU3 1222 aa13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 ZNF318Q5VUA4 2279 aa13.47□□□□□ -0.25
GTF3C1-204ENST00000564664 PHLPP2Q6ZVD8 1323 aa13.46□□□□□ -0.25
GTF3C1-204ENST00000564664 A0A087WWV3 80 aa13.46□□□□□ -0.25
GTF3C1-204ENST00000564664 C2CD4DB7Z1M9 353 aa13.46□□□□□ -0.25
GTF3C1-204ENST00000564664 PAPLNO95428 1278 aa13.46□□□□□ -0.25
GTF3C1-204ENST00000564664 NPTXRO95502 500 aa13.46□□□□□ -0.25
GTF3C1-204ENST00000564664 PRPF4BQ13523 1007 aaKnown RBP13.46□□□□□ -0.25
GTF3C1-204ENST00000564664 MAEAQ7L5Y9 396 aa13.46□□□□□ -0.25
GTF3C1-204ENST00000564664 C12orf76Q8N812 135 aaPredicted RBP13.46□□□□□ -0.25
GTF3C1-204ENST00000564664 TDRD5Q8NAT2 981 aaKnown RBP13.46□□□□□ -0.25
GTF3C1-204ENST00000564664 KREMEN2Q8NCW0 462 aa13.46□□□□□ -0.25
GTF3C1-204ENST00000564664 DEPTORQ8TB45 409 aa13.46□□□□□ -0.25
GTF3C1-204ENST00000564664 ASIC4Q96FT7 647 aa13.46□□□□□ -0.25
GTF3C1-204ENST00000564664 ZFP42Q96MM3 310 aa13.46□□□□□ -0.25
GTF3C1-204ENST00000564664 NXF3Q9H4D5 531 aaKnown RBP13.46□□□□□ -0.25
GTF3C1-204ENST00000564664 PLEKHA4Q9H4M7 779 aa13.46□□□□□ -0.25
GTF3C1-204ENST00000564664 GPRC5CQ9NQ84 441 aa13.46□□□□□ -0.25
GTF3C1-204ENST00000564664 FNIP2Q9P278 1114 aa13.46□□□□□ -0.25
GTF3C1-204ENST00000564664 PARP2Q9UGN5 583 aa13.46□□□□□ -0.25
GTF3C1-204ENST00000564664 KCNG1Q9UIX4 513 aa13.46□□□□□ -0.25
GTF3C1-204ENST00000564664 PRG3Q9Y2Y8 225 aaPredicted RBP13.46□□□□□ -0.25
GTF3C1-204ENST00000564664 MYO10Q9HD67 2058 aa13.46□□□□□ -0.26
GTF3C1-204ENST00000564664 SPDYE4A6NLX3 237 aa13.45□□□□□ -0.26
GTF3C1-204ENST00000564664 TEX28O15482 410 aa13.45□□□□□ -0.26
GTF3C1-204ENST00000564664 B4GALT5O43286 388 aa13.45□□□□□ -0.26
GTF3C1-204ENST00000564664 TADA2AO75478 443 aa13.45□□□□□ -0.26
GTF3C1-204ENST00000564664 GLUD1P00367 558 aa13.45□□□□□ -0.26
GTF3C1-204ENST00000564664 SSBP05455 408 aaKnown RBP eCLIP13.45□□□□□ -0.26
GTF3C1-204ENST00000564664 AKAP5P24588 427 aa13.45□□□□□ -0.26
GTF3C1-204ENST00000564664 CCT6AP40227 531 aaKnown RBP13.45□□□□□ -0.26
GTF3C1-204ENST00000564664 PRPHP41219 470 aa13.45□□□□□ -0.26
GTF3C1-204ENST00000564664 NHLH1Q02575 133 aa13.45□□□□□ -0.26
GTF3C1-204ENST00000564664 PTGDRQ13258 359 aa13.45□□□□□ -0.26
GTF3C1-204ENST00000564664 TUSC3Q13454 348 aa13.45□□□□□ -0.26
GTF3C1-204ENST00000564664 RABEP1Q15276 862 aa13.45□□□□□ -0.26
GTF3C1-204ENST00000564664 DCAF4L1Q3SXM0 396 aa13.45□□□□□ -0.26
GTF3C1-204ENST00000564664 POTEGQ6S5H5 508 aa13.45□□□□□ -0.26
GTF3C1-204ENST00000564664 TMC5Q6UXY8 1006 aa13.45□□□□□ -0.26
GTF3C1-204ENST00000564664 TAS1R1Q7RTX1 841 aa13.45□□□□□ -0.26
GTF3C1-204ENST00000564664 IGSF22Q8N9C0 903 aa13.45□□□□□ -0.26
GTF3C1-204ENST00000564664 APOL6Q9BWW8 343 aa13.45□□□□□ -0.26
GTF3C1-204ENST00000564664 ADAM28Q9UKQ2 775 aa13.45□□□□□ -0.26
GTF3C1-204ENST00000564664 DNM3Q9UQ16 869 aa13.45□□□□□ -0.26
GTF3C1-204ENST00000564664 ZDBF2Q9HCK1 2354 aa13.45□□□□□ -0.26
GTF3C1-204ENST00000564664 ST18O60284 1047 aa13.44□□□□□ -0.26
GTF3C1-204ENST00000564664 PRKCBP05771 671 aa13.44□□□□□ -0.26
GTF3C1-204ENST00000564664 THP07101 528 aa13.44□□□□□ -0.26
GTF3C1-204ENST00000564664 PTPN5P54829 565 aa13.44□□□□□ -0.26
GTF3C1-204ENST00000564664 ELAVL2Q12926 359 aaKnown RBP13.44□□□□□ -0.26
GTF3C1-204ENST00000564664 TMEM132AQ24JP5 1023 aa13.44□□□□□ -0.26
GTF3C1-204ENST00000564664 C8orf34Q49A92 452 aa13.44□□□□□ -0.26
GTF3C1-204ENST00000564664 KRT79Q5XKE5 535 aa13.44□□□□□ -0.26
GTF3C1-204ENST00000564664 FUT10Q6P4F1 479 aa13.44□□□□□ -0.26
GTF3C1-204ENST00000564664 PDXDC1Q6P996 788 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms