RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 ITGA10O75578 1167 aa4.28□□□□□ -1.72
CHD9-211ENST00000564600 PRKD3O94806 890 aa4.28□□□□□ -1.72
CHD9-211ENST00000564600 GCP02774 474 aa4.28□□□□□ -1.72
CHD9-211ENST00000564600 VIL1P09327 827 aaKnown RBP4.28□□□□□ -1.72
CHD9-211ENST00000564600 LTA4HP09960 611 aaKnown RBP4.28□□□□□ -1.72
CHD9-211ENST00000564600 GNAT2P19087 354 aa4.28□□□□□ -1.72
CHD9-211ENST00000564600 XPAP23025 273 aaPredicted RBP4.28□□□□□ -1.72
CHD9-211ENST00000564600 DUSP2Q05923 314 aa4.28□□□□□ -1.72
CHD9-211ENST00000564600 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.28□□□□□ -1.72
CHD9-211ENST00000564600 RABL3Q5HYI8 236 aa4.28□□□□□ -1.72
CHD9-211ENST00000564600 EGFLAMQ63HQ2 1017 aa4.28□□□□□ -1.72
CHD9-211ENST00000564600 MFSD5Q6N075 450 aa4.28□□□□□ -1.72
CHD9-211ENST00000564600 BTNL9Q6UXG8 535 aa4.28□□□□□ -1.72
CHD9-211ENST00000564600 SYT12Q8IV01 421 aa4.28□□□□□ -1.72
CHD9-211ENST00000564600 FBXO18Q8NFZ0 1043 aa4.28□□□□□ -1.72
CHD9-211ENST00000564600 OR52N2Q8NGI0 321 aa4.28□□□□□ -1.72
CHD9-211ENST00000564600 MDM1Q8TC05 714 aa4.28□□□□□ -1.72
CHD9-211ENST00000564600 SNX33Q8WV41 574 aa4.28□□□□□ -1.72
CHD9-211ENST00000564600 IL17RAQ96F46 866 aa4.28□□□□□ -1.72
CHD9-211ENST00000564600 QRSL1Q9H0R6 528 aaKnown RBP4.28□□□□□ -1.72
CHD9-211ENST00000564600 WNT8AQ9H1J5 351 aa4.28□□□□□ -1.72
CHD9-211ENST00000564600 C14orf119Q9NWQ9 140 aa4.28□□□□□ -1.72
CHD9-211ENST00000564600 PTGFRNQ9P2B2 879 aa4.28□□□□□ -1.72
CHD9-211ENST00000564600 KCNG1Q9UIX4 513 aa4.28□□□□□ -1.72
CHD9-211ENST00000564600 POLR2AP24928 1970 aaKnown RBP4.27□□□□□ -1.73
CHD9-211ENST00000564600 GOLGA8AA7E2F4 631 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 AHRRA9YTQ3 701 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 LEFTY2O00292 366 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 NRP1O14786 923 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 NRP2O60462 931 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 DNAJC6O75061 913 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 ULK1O75385 1050 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 SOX5P35711 763 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 GPR3P46089 330 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 GZMKP49863 264 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 ATXN1P54253 815 aaKnown RBP4.27□□□□□ -1.73
CHD9-211ENST00000564600 NRG3P56975 720 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 FAM189BP81408 668 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 MFSD14BQ5SR56 506 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 ZKSCAN2Q63HK3 967 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 NAIF1Q69YI7 327 aaPredicted RBP4.27□□□□□ -1.73
CHD9-211ENST00000564600 Q6ZVL8 140 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 GPRIN1Q7Z2K8 1008 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 KCNK18Q7Z418 384 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 APBB1IPQ7Z5R6 666 aaPredicted RBP4.27□□□□□ -1.73
CHD9-211ENST00000564600 GLB1L3Q8NCI6 653 aaPredicted RBP4.27□□□□□ -1.73
CHD9-211ENST00000564600 REPS2Q8NFH8 660 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 ORAI2Q96SN7 254 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 TEX101Q9BY14 249 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 EPC1Q9H2F5 836 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 SLKQ9H2G2 1235 aaPredicted RBP4.27□□□□□ -1.73
CHD9-211ENST00000564600 RIOX1Q9H6W3 641 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 DMRT3Q9NQL9 472 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.27□□□□□ -1.73
CHD9-211ENST00000564600 SORCS3Q9UPU3 1222 aa4.27□□□□□ -1.73
CHD9-211ENST00000564600 GPR39O43194 453 aa4.26□□□□□ -1.73
CHD9-211ENST00000564600 BRINP1O60477 761 aa4.26□□□□□ -1.73
CHD9-211ENST00000564600 IPO13O94829 963 aaKnown RBP4.26□□□□□ -1.73
CHD9-211ENST00000564600 LMNAP02545 664 aaKnown RBP4.26□□□□□ -1.73
CHD9-211ENST00000564600 ADSLP30566 484 aaPredicted RBP4.26□□□□□ -1.73
CHD9-211ENST00000564600 APOBEC3AP31941 199 aaPredicted RBP4.26□□□□□ -1.73
CHD9-211ENST00000564600 WNT3AP56704 352 aa4.26□□□□□ -1.73
CHD9-211ENST00000564600 SRSF2Q01130 221 aaKnown RBP4.26□□□□□ -1.73
CHD9-211ENST00000564600 C19orf54Q5BKX5 351 aa4.26□□□□□ -1.73
CHD9-211ENST00000564600 CT47A1Q5JQC4 288 aaPredicted RBP4.26□□□□□ -1.73
CHD9-211ENST00000564600 TOR2AQ5JU69 321 aa4.26□□□□□ -1.73
CHD9-211ENST00000564600 PRAMEF14Q5SWL7 426 aa4.26□□□□□ -1.73
CHD9-211ENST00000564600 LRCH2Q5VUJ6 765 aa4.26□□□□□ -1.73
CHD9-211ENST00000564600 IQSEC1Q6DN90 963 aa4.26□□□□□ -1.73
CHD9-211ENST00000564600 KRT26Q7Z3Y9 468 aa4.26□□□□□ -1.73
CHD9-211ENST00000564600 SLC35B2Q8TB61 432 aa4.26□□□□□ -1.73
CHD9-211ENST00000564600 CPT1CQ8TCG5 803 aa4.26□□□□□ -1.73
CHD9-211ENST00000564600 RSAD2Q8WXG1 361 aa4.26□□□□□ -1.73
CHD9-211ENST00000564600 ZNF764Q96H86 408 aaPredicted RBP4.26□□□□□ -1.73
CHD9-211ENST00000564600 KCNH6Q9H252 994 aa4.26□□□□□ -1.73
CHD9-211ENST00000564600 SCOCQ9UIL1 159 aa4.26□□□□□ -1.73
CHD9-211ENST00000564600 GOLGA6L6A8MZA4 724 aa4.25□□□□□ -1.73
CHD9-211ENST00000564600 GYPEP15421 78 aa4.25□□□□□ -1.73
CHD9-211ENST00000564600 KRTAP10-9P60411 292 aa4.25□□□□□ -1.73
CHD9-211ENST00000564600 ERVK-21P61565 698 aa4.25□□□□□ -1.73
CHD9-211ENST00000564600 APBA1Q02410 837 aa4.25□□□□□ -1.73
CHD9-211ENST00000564600 PPP3CAQ08209 521 aa4.25□□□□□ -1.73
CHD9-211ENST00000564600 VPS72Q15906 364 aa4.25□□□□□ -1.73
CHD9-211ENST00000564600 ADRM1Q16186 407 aa4.25□□□□□ -1.73
CHD9-211ENST00000564600 MUM1Q2TAK8 710 aa4.25□□□□□ -1.73
CHD9-211ENST00000564600 DCAF17Q5H9S7 520 aaPredicted RBP4.25□□□□□ -1.73
CHD9-211ENST00000564600 RHOUQ7L0Q8 258 aa4.25□□□□□ -1.73
CHD9-211ENST00000564600 DOK3Q7L591 496 aa4.25□□□□□ -1.73
CHD9-211ENST00000564600 FAM83AQ86UY5 434 aa4.25□□□□□ -1.73
CHD9-211ENST00000564600 ZNF276Q8N554 614 aa4.25□□□□□ -1.73
CHD9-211ENST00000564600 RNF169Q8NCN4 708 aa4.25□□□□□ -1.73
CHD9-211ENST00000564600 PROKR1Q8TCW9 393 aa4.25□□□□□ -1.73
CHD9-211ENST00000564600 SLC25A43Q8WUT9 341 aaPredicted RBP4.25□□□□□ -1.73
CHD9-211ENST00000564600 RIN2Q8WYP3 895 aaPredicted RBP4.25□□□□□ -1.73
CHD9-211ENST00000564600 HAS1Q92839 578 aa4.25□□□□□ -1.73
CHD9-211ENST00000564600 ACAP3Q96P50 834 aa4.25□□□□□ -1.73
CHD9-211ENST00000564600 BBC3Q96PG8 261 aaPredicted RBP4.25□□□□□ -1.73
CHD9-211ENST00000564600 NEU1Q99519 415 aa4.25□□□□□ -1.73
CHD9-211ENST00000564600 GPRC5DQ9NZD1 345 aa4.25□□□□□ -1.73
CHD9-211ENST00000564600 ZNF185O15231 689 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms