RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 OR1G1P47890 313 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 CLCN4P51793 760 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 EFNA5P52803 228 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 GRIK3Q13003 919 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 RARS2Q5T160 578 aaKnown RBP16.59■□□□□ 0.25
SPG7-210ENST00000564409 POTEGQ6S5H5 508 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 CYP26C1Q6V0L0 522 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 C15orf39Q6ZRI6 1047 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 UBALD2Q8IYN6 164 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 RNF168Q8IYW5 571 aaPredicted RBP16.59■□□□□ 0.25
SPG7-210ENST00000564409 C4orf32Q8N8J7 132 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 KIFAP3Q92845 792 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 PBXIP1Q96AQ6 731 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 FBXL18Q96ME1 805 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 ZFP42Q96MM3 310 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 RPS6KC1Q96S38 1066 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 RHOBTB2Q9BYZ6 727 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 NXF3Q9H4D5 531 aaKnown RBP16.59■□□□□ 0.25
SPG7-210ENST00000564409 POMKQ9H5K3 350 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 GPRC5CQ9NQ84 441 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 LRWD1Q9UFC0 647 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 HES2Q9Y543 173 aa16.59■□□□□ 0.25
SPG7-210ENST00000564409 A0A087WWV3 80 aa16.58■□□□□ 0.24
SPG7-210ENST00000564409 B4GALT5O43286 388 aa16.58■□□□□ 0.24
SPG7-210ENST00000564409 NPTXRO95502 500 aa16.58■□□□□ 0.24
SPG7-210ENST00000564409 HOXD11P31277 338 aaPredicted RBP16.58■□□□□ 0.24
SPG7-210ENST00000564409 CCT6AP40227 531 aaKnown RBP16.58■□□□□ 0.24
SPG7-210ENST00000564409 PRPHP41219 470 aa16.58■□□□□ 0.24
SPG7-210ENST00000564409 GLUD2P49448 558 aa16.58■□□□□ 0.24
SPG7-210ENST00000564409 SCNN1GP51170 649 aa16.58■□□□□ 0.24
SPG7-210ENST00000564409 CREMQ03060 361 aa16.58■□□□□ 0.24
SPG7-210ENST00000564409 PRPF4BQ13523 1007 aaKnown RBP16.58■□□□□ 0.24
SPG7-210ENST00000564409 APBB1IPQ7Z5R6 666 aaPredicted RBP16.58■□□□□ 0.24
SPG7-210ENST00000564409 ZDHHC14Q8IZN3 488 aa16.58■□□□□ 0.24
SPG7-210ENST00000564409 IGSF22Q8N9C0 903 aa16.58■□□□□ 0.24
SPG7-210ENST00000564409 CMASQ8NFW8 434 aaPredicted RBP16.58■□□□□ 0.24
SPG7-210ENST00000564409 DEPTORQ8TB45 409 aa16.58■□□□□ 0.24
SPG7-210ENST00000564409 HDAC7Q8WUI4 952 aa16.58■□□□□ 0.24
SPG7-210ENST00000564409 IFT74Q96LB3 600 aa16.58■□□□□ 0.24
SPG7-210ENST00000564409 ADPGKQ9BRR6 497 aa16.58■□□□□ 0.24
SPG7-210ENST00000564409 APOL6Q9BWW8 343 aa16.58■□□□□ 0.24
SPG7-210ENST00000564409 RXFP1Q9HBX9 757 aa16.58■□□□□ 0.24
SPG7-210ENST00000564409 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.58■□□□□ 0.24
SPG7-210ENST00000564409 MARCH5Q9NX47 278 aa16.58■□□□□ 0.24
SPG7-210ENST00000564409 PRG3Q9Y2Y8 225 aaPredicted RBP16.58■□□□□ 0.24
SPG7-210ENST00000564409 DENND4AQ7Z401 1863 aa16.58■□□□□ 0.24
SPG7-210ENST00000564409 PHLPP2Q6ZVD8 1323 aa16.57■□□□□ 0.24
SPG7-210ENST00000564409 SPDYE4A6NLX3 237 aa16.57■□□□□ 0.24
SPG7-210ENST00000564409 ACKR2O00590 384 aa16.57■□□□□ 0.24
SPG7-210ENST00000564409 DSG1Q02413 1049 aa16.57■□□□□ 0.24
SPG7-210ENST00000564409 PTGDRQ13258 359 aa16.57■□□□□ 0.24
SPG7-210ENST00000564409 KIAA0319Q5VV43 1072 aa16.57■□□□□ 0.24
SPG7-210ENST00000564409 MAEAQ7L5Y9 396 aa16.57■□□□□ 0.24
SPG7-210ENST00000564409 GPR149Q86SP6 731 aa16.57■□□□□ 0.24
SPG7-210ENST00000564409 ZBTB33Q86T24 672 aa16.57■□□□□ 0.24
SPG7-210ENST00000564409 SUGP1Q8IWZ8 645 aaKnown RBP16.57■□□□□ 0.24
SPG7-210ENST00000564409 KCTD17Q8N5Z5 321 aa16.57■□□□□ 0.24
SPG7-210ENST00000564409 TDRD5Q8NAT2 981 aaKnown RBP16.57■□□□□ 0.24
SPG7-210ENST00000564409 GSTCDQ8NEC7 633 aa16.57■□□□□ 0.24
SPG7-210ENST00000564409 TSHZ2Q9NRE2 1034 aa16.57■□□□□ 0.24
SPG7-210ENST00000564409 CHST7Q9NS84 486 aa16.57■□□□□ 0.24
SPG7-210ENST00000564409 MIOSQ9NXC5 875 aa16.57■□□□□ 0.24
SPG7-210ENST00000564409 PARP2Q9UGN5 583 aa16.57■□□□□ 0.24
SPG7-210ENST00000564409 SORCS3Q9UPU3 1222 aa16.57■□□□□ 0.24
SPG7-210ENST00000564409 TRIOO75962 3097 aa16.56■□□□□ 0.24
SPG7-210ENST00000564409 SSBP05455 408 aaKnown RBP eCLIP16.56■□□□□ 0.24
SPG7-210ENST00000564409 AKAP5P24588 427 aa16.56■□□□□ 0.24
SPG7-210ENST00000564409 MTMR3Q13615 1198 aa16.56■□□□□ 0.24
SPG7-210ENST00000564409 TMEM132AQ24JP5 1023 aa16.56■□□□□ 0.24
SPG7-210ENST00000564409 USP41Q3LFD5 358 aa16.56■□□□□ 0.24
SPG7-210ENST00000564409 FBXL6Q8N531 539 aa16.56■□□□□ 0.24
SPG7-210ENST00000564409 C12orf76Q8N812 135 aaPredicted RBP16.56■□□□□ 0.24
SPG7-210ENST00000564409 ACSF2Q96CM8 615 aaPredicted RBP16.56■□□□□ 0.24
SPG7-210ENST00000564409 CCDC113Q9H0I3 377 aa16.56■□□□□ 0.24
SPG7-210ENST00000564409 BHMT2Q9H2M3 363 aa16.56■□□□□ 0.24
SPG7-210ENST00000564409 UPF2Q9HAU5 1272 aaKnown RBP16.56■□□□□ 0.24
SPG7-210ENST00000564409 FNIP2Q9P278 1114 aa16.56■□□□□ 0.24
SPG7-210ENST00000564409 ADAM28Q9UKQ2 775 aa16.56■□□□□ 0.24
SPG7-210ENST00000564409 DNM3Q9UQ16 869 aa16.56■□□□□ 0.24
SPG7-210ENST00000564409 C2orf16Q68DN1 1984 aa16.56■□□□□ 0.24
SPG7-210ENST00000564409 PIEZO1Q92508 2521 aa16.56■□□□□ 0.24
SPG7-210ENST00000564409 ZDBF2Q9HCK1 2354 aa16.56■□□□□ 0.24
SPG7-210ENST00000564409 C2CD4DB7Z1M9 353 aa16.55■□□□□ 0.24
SPG7-210ENST00000564409 PAPLNO95428 1278 aa16.55■□□□□ 0.24
SPG7-210ENST00000564409 GLUD1P00367 558 aa16.55■□□□□ 0.24
SPG7-210ENST00000564409 PRKCBP05771 671 aa16.55■□□□□ 0.24
SPG7-210ENST00000564409 TOB1P50616 345 aaPredicted RBP16.55■□□□□ 0.24
SPG7-210ENST00000564409 TUSC3Q13454 348 aa16.55■□□□□ 0.24
SPG7-210ENST00000564409 DCAF4L1Q3SXM0 396 aa16.55■□□□□ 0.24
SPG7-210ENST00000564409 RILPL1Q5EBL4 403 aa16.55■□□□□ 0.24
SPG7-210ENST00000564409 KRT79Q5XKE5 535 aa16.55■□□□□ 0.24
SPG7-210ENST00000564409 TMC5Q6UXY8 1006 aa16.55■□□□□ 0.24
SPG7-210ENST00000564409 CCDC149Q6ZUS6 474 aa16.55■□□□□ 0.24
SPG7-210ENST00000564409 OTOP3Q7RTS5 596 aa16.55■□□□□ 0.24
SPG7-210ENST00000564409 KREMEN2Q8NCW0 462 aa16.55■□□□□ 0.24
SPG7-210ENST00000564409 BSNDQ8WZ55 320 aa16.55■□□□□ 0.24
SPG7-210ENST00000564409 PLEKHA4Q9H4M7 779 aa16.55■□□□□ 0.24
SPG7-210ENST00000564409 PDZD7Q9H5P4 517 aa16.55■□□□□ 0.24
SPG7-210ENST00000564409 KCNG1Q9UIX4 513 aa16.55■□□□□ 0.24
SPG7-210ENST00000564409 KIAA1024Q9UPX6 916 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms