RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 BTBD6Q96KE9 485 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 ROPN1BQ9BZX4 212 aaPredicted RBP13.43□□□□□ -0.26
COMMD4-209ENST00000564068 ROPN1Q9HAT0 212 aaPredicted RBP13.43□□□□□ -0.26
COMMD4-209ENST00000564068 COMMD10Q9Y6G5 202 aa13.43□□□□□ -0.26
COMMD4-209ENST00000564068 KIF20BQ96Q89 1820 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 COPEO14579 308 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 ZCCHC18P0CG32 403 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 DYNC1I2Q13409 638 aaKnown RBP13.42□□□□□ -0.26
COMMD4-209ENST00000564068 CCDC14Q49A88 953 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 SLC26A7Q8TE54 656 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 PJA2O43164 708 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 SHBGP04278 402 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 CD58P19256 250 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 ITIH2P19823 946 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 COILP38432 576 aaPredicted RBP13.42□□□□□ -0.26
COMMD4-209ENST00000564068 CACNB3P54284 484 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 ORC2Q13416 577 aaPredicted RBP13.42□□□□□ -0.26
COMMD4-209ENST00000564068 DNAJC24Q6P3W2 148 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 TRIM11Q96F44 468 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 TRAIPQ9BWF2 469 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 SLC13A1Q9BZW2 595 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 MAD2L2Q9UI95 211 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 PFASO15067 1338 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 SLIT1O75093 1534 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 KLRC4O43908 158 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 TTLL12Q14166 644 aaPredicted RBP13.42□□□□□ -0.26
COMMD4-209ENST00000564068 KRT81Q14533 505 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 ANKRD20A2Q5SQ80 823 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 ANKRD20A1Q5TYW2 823 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 APTXQ7Z2E3 356 aaKnown RBP13.42□□□□□ -0.26
COMMD4-209ENST00000564068 NLGN1Q8N2Q7 840 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 CCDC17Q96LX7 622 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 RIOK1Q9BRS2 568 aaKnown RBP13.42□□□□□ -0.26
COMMD4-209ENST00000564068 ZWILCHQ9H900 591 aa13.42□□□□□ -0.26
COMMD4-209ENST00000564068 METTL5Q9NRN9 209 aaKnown RBP13.42□□□□□ -0.26
COMMD4-209ENST00000564068 DNM1LO00429 736 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 ENO1P06733 434 aaKnown RBP13.41□□□□□ -0.26
COMMD4-209ENST00000564068 RARGP13631 454 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 DDR1Q08345 913 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 RABGAP1LQ5R372 815 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 SYCP2LQ5T4T6 812 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 NLRX1Q86UT6 975 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 RASSF3Q86WH2 238 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 TEX9Q8N6V9 391 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 TMEM237Q96Q45 408 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 NUDT12Q9BQG2 462 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 CDC42EP4Q9H3Q1 356 aaKnown RBP13.41□□□□□ -0.26
COMMD4-209ENST00000564068 MARCOQ9UEW3 520 aaPredicted RBP13.41□□□□□ -0.26
COMMD4-209ENST00000564068 SPATA31A5Q5VU36 1347 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 SPATA31A7Q8IWB4 1347 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 IQANK1A0A1B0GTG1 560 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 ASAP2O43150 1006 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 CCDC22O60826 627 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 GGPS1O95749 300 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 AKR1B1P15121 316 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 ARSEP51690 589 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 RCN1Q15293 331 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 ABCB5Q2M3G0 1257 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 KCNV1Q6PIU1 500 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 CHURC1Q8WUH1 139 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 WDR11Q9BZH6 1224 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 SALL4Q9UJQ4 1053 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 LRRIQ4A6NIV6 560 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 FLT3P36888 993 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 ARL4CP56559 192 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 P3H1Q32P28 736 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 EPC2Q52LR7 807 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 CRLF3Q8IUI8 442 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 CD302Q8IX05 232 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 PPM1NQ8N819 430 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 DEPTORQ8TB45 409 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 OSBPL7Q9BZF2 842 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 KMT5AQ9NQR1 393 aa13.41□□□□□ -0.26
COMMD4-209ENST00000564068 CAPN9O14815 690 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 FOXP2O15409 715 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 TJP3O95049 919 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 CYP11B2P19099 503 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 AP2B1P63010 937 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 DARS2Q6PI48 645 aaKnown RBP13.4□□□□□ -0.26
COMMD4-209ENST00000564068 TRIM42Q8IWZ5 723 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 EIF2AK1Q9BQI3 630 aaKnown RBP13.4□□□□□ -0.26
COMMD4-209ENST00000564068 ANLNQ9NQW6 1124 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 MRPL11Q9Y3B7 192 aaKnown RBP13.4□□□□□ -0.26
COMMD4-209ENST00000564068 RSPH10B2B2RC85 870 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 FOXN3O00409 490 aaPredicted RBP13.4□□□□□ -0.26
COMMD4-209ENST00000564068 LPXNO60711 386 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 RTN2O75298 545 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 DNAJC8O75937 253 aaPredicted RBP13.4□□□□□ -0.26
COMMD4-209ENST00000564068 RSPH10BP0C881 870 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 RASA1P20936 1047 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 ATP2B4P23634 1241 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 PAPOLAP51003 745 aaKnown RBP13.4□□□□□ -0.26
COMMD4-209ENST00000564068 FXR2P51116 673 aaKnown RBP eCLIP13.4□□□□□ -0.26
COMMD4-209ENST00000564068 ERICH1Q86X53 443 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 SLC13A5Q86YT5 568 aaPredicted RBP13.4□□□□□ -0.26
COMMD4-209ENST00000564068 PPWD1Q96BP3 646 aaKnown RBP13.4□□□□□ -0.26
COMMD4-209ENST00000564068 BCAP29Q9UHQ4 241 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 PHTF1Q9UMS5 762 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 PCDHGC5Q9Y5F6 944 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 MEGF6O75095 1541 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms