RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 NAB2Q15742 525 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 RTN1Q16799 776 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 SHROOM1Q2M3G4 852 aaPredicted RBP9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 SBK1Q52WX2 424 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 EAPPQ56P03 285 aaPredicted RBP9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 TTI2Q6NXR4 508 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 MGARPQ8TDB4 240 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 SLC7A6OSQ96CW6 309 aaPredicted RBP9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 TUBGCP5Q96RT8 1024 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 FMO2Q99518 471 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 CELF4Q9BZC1 486 aaKnown RBP9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 MKNK2Q9HBH9 465 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 METTL5Q9NRN9 209 aaKnown RBP9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 TBC1D7Q9P0N9 293 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 KLHL14Q9P2G3 628 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 TRIM75PA6NK02 468 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 LRRC53A6NM62 1247 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 LMNAP02545 664 aaKnown RBP9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 MLH1P40692 756 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 CD97P48960 835 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 SH3BGRP55822 239 aaPredicted RBP9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 GSTM4Q03013 218 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 ADCY1Q08828 1119 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 CCDC6Q16204 474 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 GSTA3Q16772 222 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 SPATA24Q86W54 205 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 PALB2Q86YC2 1186 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 SCUBE1Q8IWY4 988 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 ATP11CQ8NB49 1132 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 NAT14Q8WUY8 206 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 INPP5DQ92835 1189 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 DHRS1Q96LJ7 313 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 CSRNP1Q96S65 589 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 DUSP9Q99956 384 aaKnown RBP9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 CENPKQ9BS16 269 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 ZMYND12Q9H0C1 365 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 PABPC3Q9H361 631 aaKnown RBP9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 FAM207AQ9NSI2 230 aaPredicted RBP9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 GGA3Q9NZ52 723 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 FZD1Q9UP38 647 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 CNTNAP1P78357 1384 aa9.8□□□□□ -0.84
AC138869.3-201ENST00000563960 POTECB2RU33 542 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 POTEIP0CG38 1075 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 POTEJP0CG39 1038 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 ITGA4P13612 1032 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 IDO1P14902 403 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 VAV1P15498 845 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 CDK8P49336 464 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 CDK7P50613 346 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 SLC29A2Q14542 456 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 WDR72Q3MJ13 1102 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 TNFAIP8L3Q5GJ75 292 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 EARS2Q5JPH6 523 aaKnown RBP9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 UBAP2Q5T6F2 1119 aaKnown RBP9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 LRRC74BQ6ZQY2 392 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 KBTBD2Q8IY47 623 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 CYP4X1Q8N118 509 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 LRRC43Q8N309 656 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 RIBC1Q8N443 379 aaPredicted RBP9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 CSGALNACT2Q8N6G5 542 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 NEK9Q8TD19 979 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 ACTRT1Q8TDG2 376 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 WASF1Q92558 559 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 PPP2R3CQ969Q6 453 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 CNOT6LQ96LI5 555 aaKnown RBP9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 CATSPER2Q96P56 530 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 NR1H4Q96RI1 486 aaPredicted RBP9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 NOC4LQ9BVI4 516 aaKnown RBP9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 KIAA1683Q9H0B3 1180 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 CCDC113Q9H0I3 377 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 DEFB129Q9H1M3 183 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 ARHGEF38Q9NXL2 777 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 LARSQ9P2J5 1176 aaKnown RBP9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 NPHP3-ACAD11A0A0J9YXS1 232 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 TMEM247A6NEH6 219 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 RBAK-RBAKDNI3L0D1 243 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 CES2O00748 559 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 MAGEB3O15480 346 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 ATP5HO75947 161 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 BCRP11274 1271 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 EPHX2P34913 555 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 SLCO1A2P46721 670 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 VASPP50552 380 aaPredicted RBP9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 PMS2P54278 862 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 TFAP4Q01664 338 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 KCNMA1Q12791 1236 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 MAP7Q14244 749 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 RCN1Q15293 331 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 SLC44A4Q53GD3 710 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 C6orf118Q5T5N4 469 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 DENND2CQ68D51 928 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 RRAGAQ7L523 313 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 VSIG1Q86XK7 387 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 CRACR2BQ8N4Y2 399 aaPredicted RBP9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 EPS8L3Q8TE67 593 aaKnown RBP9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 TAF4BQ92750 862 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 MPP4Q96JB8 637 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 DNAJC1Q96KC8 554 aaKnown RBP9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 CCDC28BQ9BUN5 200 aa9.79□□□□□ -0.84
AC138869.3-201ENST00000563960 TRIM31Q9BZY9 425 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms