RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 ZMYM2Q9UBW7 1377 aa10.57□□□□□ -0.72
CLN6-203ENST00000563917 ARID2Q68CP9 1835 aa10.57□□□□□ -0.72
CLN6-203ENST00000563917 INPPL1O15357 1258 aa10.57□□□□□ -0.72
CLN6-203ENST00000563917 CNPP09543 421 aaKnown RBP10.57□□□□□ -0.72
CLN6-203ENST00000563917 MUTP22033 750 aa10.57□□□□□ -0.72
CLN6-203ENST00000563917 AKAP5P24588 427 aa10.57□□□□□ -0.72
CLN6-203ENST00000563917 AVPR2P30518 371 aa10.57□□□□□ -0.72
CLN6-203ENST00000563917 CLCN4P51793 760 aa10.57□□□□□ -0.72
CLN6-203ENST00000563917 NUBP1P53384 320 aa10.57□□□□□ -0.72
CLN6-203ENST00000563917 GRIK3Q13003 919 aa10.57□□□□□ -0.72
CLN6-203ENST00000563917 ZNF174Q15697 407 aa10.57□□□□□ -0.72
CLN6-203ENST00000563917 MAPK6Q16659 721 aa10.57□□□□□ -0.72
CLN6-203ENST00000563917 USP41Q3LFD5 358 aa10.57□□□□□ -0.72
CLN6-203ENST00000563917 CYP26C1Q6V0L0 522 aa10.57□□□□□ -0.72
CLN6-203ENST00000563917 C15orf39Q6ZRI6 1047 aa10.57□□□□□ -0.72
CLN6-203ENST00000563917 CATSPER3Q86XQ3 398 aa10.57□□□□□ -0.72
CLN6-203ENST00000563917 CCDC83Q8IWF9 413 aa10.57□□□□□ -0.72
CLN6-203ENST00000563917 ZFP42Q96MM3 310 aa10.57□□□□□ -0.72
CLN6-203ENST00000563917 MAN1C1Q9NR34 630 aa10.57□□□□□ -0.72
CLN6-203ENST00000563917 SH2B1Q9NRF2 756 aaPredicted RBP10.57□□□□□ -0.72
CLN6-203ENST00000563917 LIMD1Q9UGP4 676 aa10.57□□□□□ -0.72
CLN6-203ENST00000563917 CDH22Q9UJ99 828 aa10.57□□□□□ -0.72
CLN6-203ENST00000563917 TECTAO75443 2155 aa10.56□□□□□ -0.72
CLN6-203ENST00000563917 A0A1B0GUA9 196 aa10.56□□□□□ -0.72
CLN6-203ENST00000563917 CENPBP07199 599 aaPredicted RBP10.56□□□□□ -0.72
CLN6-203ENST00000563917 LIG1P18858 919 aa10.56□□□□□ -0.72
CLN6-203ENST00000563917 RFX1P22670 979 aa10.56□□□□□ -0.72
CLN6-203ENST00000563917 RPA1P27694 616 aa10.56□□□□□ -0.72
CLN6-203ENST00000563917 GBP2P32456 591 aaPredicted RBP10.56□□□□□ -0.72
CLN6-203ENST00000563917 CCT6AP40227 531 aaKnown RBP10.56□□□□□ -0.72
CLN6-203ENST00000563917 TRAPPC10P48553 1259 aa10.56□□□□□ -0.72
CLN6-203ENST00000563917 AFF1P51825 1210 aaKnown RBP10.56□□□□□ -0.72
CLN6-203ENST00000563917 DSC1Q08554 894 aa10.56□□□□□ -0.72
CLN6-203ENST00000563917 PRPF4BQ13523 1007 aaKnown RBP10.56□□□□□ -0.72
CLN6-203ENST00000563917 TTC38Q5R3I4 469 aa10.56□□□□□ -0.72
CLN6-203ENST00000563917 FUT10Q6P4F1 479 aa10.56□□□□□ -0.72
CLN6-203ENST00000563917 PADI6Q6TGC4 694 aa10.56□□□□□ -0.72
CLN6-203ENST00000563917 HDAC7Q8WUI4 952 aa10.56□□□□□ -0.72
CLN6-203ENST00000563917 VN1R3Q9BXE9 311 aa10.56□□□□□ -0.72
CLN6-203ENST00000563917 TMEM60Q9H2L4 133 aa10.56□□□□□ -0.72
CLN6-203ENST00000563917 RNF39Q9H2S5 420 aa10.56□□□□□ -0.72
CLN6-203ENST00000563917 NXF3Q9H4D5 531 aaKnown RBP10.56□□□□□ -0.72
CLN6-203ENST00000563917 PLEKHA4Q9H4M7 779 aa10.56□□□□□ -0.72
CLN6-203ENST00000563917 KLK14Q9P0G3 267 aa10.56□□□□□ -0.72
CLN6-203ENST00000563917 ADAM28Q9UKQ2 775 aa10.56□□□□□ -0.72
CLN6-203ENST00000563917 SF3B1O75533 1304 aaKnown RBP eCLIP10.56□□□□□ -0.728e-9■■■■■ 155.1
CLN6-203ENST00000563917 A0A087WWV3 80 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 CCDC195A0A1B0GUA6 201 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 TEX28O15482 410 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 B4GALT5O43286 388 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 B4GALT3O60512 393 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 MED24O75448 989 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 BRD1O95696 1058 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 C1RP00736 705 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 PRKCBP05771 671 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 THP07101 528 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 SPATA31C1P0DKV0 1188 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 CYP11B2P19099 503 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 NAMPTP43490 491 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 EFNA5P52803 228 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 DSG1Q02413 1049 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 TUSC3Q13454 348 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 AMHR2Q16671 573 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 KANK3Q6NY19 840 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 PDXDC1Q6P996 788 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 POTEGQ6S5H5 508 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 PPP4R3CPQ6ZMV5 832 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 CDR2LQ86X02 465 aaPredicted RBP10.55□□□□□ -0.72
CLN6-203ENST00000563917 NOSTRINQ8IVI9 506 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 GPR65Q8IYL9 337 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 CMASQ8NFW8 434 aaPredicted RBP10.55□□□□□ -0.72
CLN6-203ENST00000563917 FBXO18Q8NFZ0 1043 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 RIN2Q8WYP3 895 aaPredicted RBP10.55□□□□□ -0.72
CLN6-203ENST00000563917 SMG7Q92540 1137 aaKnown RBP10.55□□□□□ -0.72
CLN6-203ENST00000563917 KIFAP3Q92845 792 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 ATOH1Q92858 354 aaPredicted RBP10.55□□□□□ -0.72
CLN6-203ENST00000563917 ASIC4Q96FT7 647 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 GPRC5CQ9NQ84 441 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 MARCH5Q9NX47 278 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 LRWD1Q9UFC0 647 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 FBXL21Q9UKT6 434 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 PHLPP2Q6ZVD8 1323 aa10.55□□□□□ -0.72
CLN6-203ENST00000563917 ACKR2O00590 384 aa10.54□□□□□ -0.72
CLN6-203ENST00000563917 WNT7AO00755 349 aa10.54□□□□□ -0.72
CLN6-203ENST00000563917 LILRB3O75022 631 aa10.54□□□□□ -0.72
CLN6-203ENST00000563917 ASGR2P07307 311 aa10.54□□□□□ -0.72
CLN6-203ENST00000563917 ELAVL2Q12926 359 aaKnown RBP10.54□□□□□ -0.72
CLN6-203ENST00000563917 TDGQ13569 410 aa10.54□□□□□ -0.72
CLN6-203ENST00000563917 HSP90AA2PQ14568 343 aaPredicted RBP10.54□□□□□ -0.72
CLN6-203ENST00000563917 FAM187BQ17R55 369 aa10.54□□□□□ -0.72
CLN6-203ENST00000563917 DCAF4L1Q3SXM0 396 aa10.54□□□□□ -0.72
CLN6-203ENST00000563917 IER5LQ5T953 404 aa10.54□□□□□ -0.72
CLN6-203ENST00000563917 LIN9Q5TKA1 542 aa10.54□□□□□ -0.72
CLN6-203ENST00000563917 KIAA0319Q5VV43 1072 aa10.54□□□□□ -0.72
CLN6-203ENST00000563917 KRT79Q5XKE5 535 aa10.54□□□□□ -0.72
CLN6-203ENST00000563917 CDCA2Q69YH5 1023 aaPredicted RBP10.54□□□□□ -0.72
CLN6-203ENST00000563917 CEP57Q86XR8 500 aa10.54□□□□□ -0.72
CLN6-203ENST00000563917 PALB2Q86YC2 1186 aa10.54□□□□□ -0.72
CLN6-203ENST00000563917 PRSS33Q8NF86 280 aa10.54□□□□□ -0.72
CLN6-203ENST00000563917 FZD8Q9H461 694 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms