RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 CCDC127Q96BQ5 260 aa23.87■■□□□ 1.41
LINC01960-201ENST00000563759 GCNT4Q9P109 453 aa23.87■■□□□ 1.41
LINC01960-201ENST00000563759 CITO14578 2027 aa23.87■■□□□ 1.41
LINC01960-201ENST00000563759 TTC26A0AVF1 554 aa23.87■■□□□ 1.41
LINC01960-201ENST00000563759 MYL7Q01449 175 aa23.87■■□□□ 1.41
LINC01960-201ENST00000563759 AMHR2Q16671 573 aa23.87■■□□□ 1.41
LINC01960-201ENST00000563759 EXOC3L4Q17RC7 722 aa23.87■■□□□ 1.41
LINC01960-201ENST00000563759 FIGNQ5HY92 759 aa23.87■■□□□ 1.41
LINC01960-201ENST00000563759 GBP6Q6ZN66 633 aa23.87■■□□□ 1.41
LINC01960-201ENST00000563759 SESTD1Q86VW0 696 aa23.87■■□□□ 1.41
LINC01960-201ENST00000563759 MFSD14AQ96MC6 490 aa23.87■■□□□ 1.41
LINC01960-201ENST00000563759 GLT1D1Q96MS3 346 aa23.87■■□□□ 1.41
LINC01960-201ENST00000563759 LSM14BQ9BX40 385 aaKnown RBP23.87■■□□□ 1.41
LINC01960-201ENST00000563759 TNFSF13BQ9Y275 285 aa23.87■■□□□ 1.41
LINC01960-201ENST00000563759 GTPBP10A4D1E9 387 aaKnown RBP23.86■■□□□ 1.41
LINC01960-201ENST00000563759 PROZP22891 400 aa23.86■■□□□ 1.41
LINC01960-201ENST00000563759 MCL1Q07820 350 aa23.86■■□□□ 1.41
LINC01960-201ENST00000563759 KCNMA1Q12791 1236 aa23.86■■□□□ 1.41
LINC01960-201ENST00000563759 NME8Q8N427 588 aa23.86■■□□□ 1.41
LINC01960-201ENST00000563759 CCDC112Q8NEF3 446 aa23.86■■□□□ 1.41
LINC01960-201ENST00000563759 TTYH3Q9C0H2 523 aa23.86■■□□□ 1.41
LINC01960-201ENST00000563759 UNC93B1Q9H1C4 597 aa23.86■■□□□ 1.41
LINC01960-201ENST00000563759 RBAKQ9NYW8 714 aaPredicted RBP23.86■■□□□ 1.41
LINC01960-201ENST00000563759 LUC7L2Q9Y383 392 aaKnown RBP23.86■■□□□ 1.41
LINC01960-201ENST00000563759 STX10O60499 249 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 N4BP1O75113 896 aaKnown RBP23.85■■□□□ 1.41
LINC01960-201ENST00000563759 MYCP01106 439 aaPredicted RBP23.85■■□□□ 1.41
LINC01960-201ENST00000563759 MSNP26038 577 aaKnown RBP23.85■■□□□ 1.41
LINC01960-201ENST00000563759 KRT9P35527 623 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 CBWD6Q4V339 395 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 CBWD3Q5JTY5 395 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 CBWD5Q5RIA9 395 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 CDR2LQ86X02 465 aaPredicted RBP23.85■■□□□ 1.41
LINC01960-201ENST00000563759 ZNF710Q8N1W2 664 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 ARRDC4Q8NCT1 418 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 PLEKHO2Q8TD55 490 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 PARD3BQ8TEW8 1205 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 TSEN34Q9BSV6 310 aaKnown RBP23.85■■□□□ 1.41
LINC01960-201ENST00000563759 CAPN11Q9UMQ6 739 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 M0QZ92 97 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 ABLIM1O14639 778 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 OGTO15294 1046 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 TSPAN1O60635 241 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 DLATP10515 647 aaKnown RBP23.85■■□□□ 1.41
LINC01960-201ENST00000563759 SKILP12757 684 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 CCZ1BP86790 482 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 CCZ1P86791 482 aaPredicted RBP23.85■■□□□ 1.41
LINC01960-201ENST00000563759 ITGA7Q13683 1181 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 ZBTB41Q5SVQ8 909 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 RSPH3Q86UC2 560 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 DNAJC5GQ8N7S2 189 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 TMC2Q8TDI7 906 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 CCDC51Q96ER9 411 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 CPB2Q96IY4 423 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 PANX2Q96RD6 677 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 PTPRHQ9HD43 1115 aa23.85■■□□□ 1.41
LINC01960-201ENST00000563759 GRIN2DO15399 1336 aa23.84■■□□□ 1.41
LINC01960-201ENST00000563759 LRRIQ3A6PVS8 624 aaPredicted RBP23.84■■□□□ 1.41
LINC01960-201ENST00000563759 KBTBD13C9JR72 458 aa23.84■■□□□ 1.41
LINC01960-201ENST00000563759 DARSP14868 501 aaKnown RBP23.84■■□□□ 1.41
LINC01960-201ENST00000563759 ARF4P18085 180 aaPredicted RBP23.84■■□□□ 1.41
LINC01960-201ENST00000563759 FGFR4P22455 802 aa23.84■■□□□ 1.41
LINC01960-201ENST00000563759 GCLMP48507 274 aa23.84■■□□□ 1.41
LINC01960-201ENST00000563759 MXI1P50539 228 aa23.84■■□□□ 1.41
LINC01960-201ENST00000563759 PPP3CAQ08209 521 aa23.84■■□□□ 1.41
LINC01960-201ENST00000563759 SEZ6Q53EL9 994 aa23.84■■□□□ 1.41
LINC01960-201ENST00000563759 EEF1DP3Q658K8 133 aa23.84■■□□□ 1.41
LINC01960-201ENST00000563759 CRELD2Q6UXH1 353 aaPredicted RBP23.84■■□□□ 1.41
LINC01960-201ENST00000563759 CATSPER4Q7RTX7 472 aa23.84■■□□□ 1.41
LINC01960-201ENST00000563759 ZNF397Q8NF99 534 aaPredicted RBP23.84■■□□□ 1.41
LINC01960-201ENST00000563759 FNBP1Q96RU3 617 aa23.84■■□□□ 1.41
LINC01960-201ENST00000563759 CDHR5Q9HBB8 845 aa23.84■■□□□ 1.41
LINC01960-201ENST00000563759 ABHD10Q9NUJ1 306 aa23.84■■□□□ 1.41
LINC01960-201ENST00000563759 A0A1W2PQJ5 194 aa23.83■■□□□ 1.41
LINC01960-201ENST00000563759 EPHB6O15197 1021 aa23.83■■□□□ 1.41
LINC01960-201ENST00000563759 ENPEPQ07075 957 aa23.83■■□□□ 1.41
LINC01960-201ENST00000563759 NCBP1Q09161 790 aaKnown RBP23.83■■□□□ 1.41
LINC01960-201ENST00000563759 CETN1Q12798 172 aa23.83■■□□□ 1.41
LINC01960-201ENST00000563759 CACNA2D4Q7Z3S7 1137 aa23.83■■□□□ 1.41
LINC01960-201ENST00000563759 SERINC5Q86VE9 423 aa23.83■■□□□ 1.41
LINC01960-201ENST00000563759 CDT1Q9H211 546 aa23.83■■□□□ 1.41
LINC01960-201ENST00000563759 PDZD7Q9H5P4 517 aa23.83■■□□□ 1.41
LINC01960-201ENST00000563759 NOD1Q9Y239 953 aa23.83■■□□□ 1.41
LINC01960-201ENST00000563759 RNF225M0QZC1 329 aaPredicted RBP23.83■■□□□ 1.4
LINC01960-201ENST00000563759 SLC9A1P19634 815 aa23.83■■□□□ 1.4
LINC01960-201ENST00000563759 EIF4BP23588 611 aaKnown RBP23.83■■□□□ 1.4
LINC01960-201ENST00000563759 PSMD6Q15008 389 aa23.83■■□□□ 1.4
LINC01960-201ENST00000563759 SNX17Q15036 470 aa23.83■■□□□ 1.4
LINC01960-201ENST00000563759 PCBP1Q15365 356 aaKnown RBP eCLIP23.83■■□□□ 1.4
LINC01960-201ENST00000563759 PTGISQ16647 500 aa23.83■■□□□ 1.4
LINC01960-201ENST00000563759 C1orf220Q5T0J3 134 aa23.83■■□□□ 1.4
LINC01960-201ENST00000563759 BAG1Q99933 345 aaPredicted RBP23.83■■□□□ 1.4
LINC01960-201ENST00000563759 AGPAT5Q9NUQ2 364 aa23.83■■□□□ 1.4
LINC01960-201ENST00000563759 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.83■■□□□ 1.4
LINC01960-201ENST00000563759 A0A1W2PQ45 241 aaPredicted RBP23.82■■□□□ 1.4
LINC01960-201ENST00000563759 A0A1W2PQY0 241 aa23.82■■□□□ 1.4
LINC01960-201ENST00000563759 FAM189A1O60320 539 aa23.82■■□□□ 1.4
LINC01960-201ENST00000563759 RPLP2P05387 115 aaKnown RBP23.82■■□□□ 1.4
LINC01960-201ENST00000563759 PON1P27169 355 aa23.82■■□□□ 1.4
LINC01960-201ENST00000563759 TNFSF9P41273 254 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms