RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 SLITRK6Q9H5Y7 841 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 OSGEPQ9NPF4 335 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 HSPBP1Q9NZL4 362 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 FOXN3O00409 490 aaPredicted RBP11.18□□□□□ -0.62
RNF40-204ENST00000563683 SLC16A3O15427 465 aaKnown RBP11.18□□□□□ -0.62
RNF40-204ENST00000563683 LACTBP83111 547 aaPredicted RBP11.18□□□□□ -0.62
RNF40-204ENST00000563683 GRIK3Q13003 919 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 BAATQ14032 418 aaPredicted RBP11.18□□□□□ -0.62
RNF40-204ENST00000563683 SPRED3Q2MJR0 410 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 EPC2Q52LR7 807 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 KRT39Q6A163 491 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 VTI1AQ96AJ9 217 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 PPP1R16BQ96T49 567 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 FGFBP2Q9BYJ0 223 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 UNC45AQ9H3U1 944 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 RASGRF2O14827 1237 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 PPP1R11O60927 126 aaPredicted RBP11.18□□□□□ -0.62
RNF40-204ENST00000563683 ANP32DO95626 131 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 PSAPP07602 524 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 PSMC5P62195 406 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 DYNLT1P63172 113 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 KCNMA1Q12791 1236 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 MTMR2Q13614 643 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 ALCAMQ13740 583 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 BYSLQ13895 437 aaKnown RBP11.18□□□□□ -0.62
RNF40-204ENST00000563683 AP1ARQ63HQ0 302 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 HGSNATQ68CP4 663 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 CCDC89Q8N998 374 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 SCFD2Q8WU76 684 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 C11orf70Q9BRQ4 267 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 POLR3CQ9BUI4 534 aaPredicted RBP11.18□□□□□ -0.62
RNF40-204ENST00000563683 MOV10L1Q9BXT6 1211 aaKnown RBP11.18□□□□□ -0.62
RNF40-204ENST00000563683 KCNG1Q9UIX4 513 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 CSADQ9Y600 493 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 MYO3BQ8WXR4 1341 aa11.18□□□□□ -0.62
RNF40-204ENST00000563683 LUC7L3O95232 432 aaKnown RBP11.17□□□□□ -0.62
RNF40-204ENST00000563683 SCARA5Q6ZMJ2 495 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 CDAN1Q8IWY9 1227 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 CERKQ8TCT0 537 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 STAMBPL1Q96FJ0 436 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 THOC1Q96FV9 657 aaKnown RBP11.17□□□□□ -0.62
RNF40-204ENST00000563683 MLXIPLQ9NP71 852 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 NRBP2Q9NSY0 501 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 MIF4GDA9UHW6 222 aaKnown RBP11.17□□□□□ -0.62
RNF40-204ENST00000563683 H0YCG3 227 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 ZBTB7AO95365 584 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 SETDB1Q15047 1291 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 CAPRIN2Q6IMN6 1127 aaKnown RBP11.17□□□□□ -0.62
RNF40-204ENST00000563683 RSBN1LQ6PCB5 846 aaPredicted RBP11.17□□□□□ -0.62
RNF40-204ENST00000563683 TMEM270Q6UE05 265 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 VSIG1Q86XK7 387 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 ZBTB8OSQ8IWT0 167 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 C1orf54Q8WWF1 131 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 HAUS1Q96CS2 278 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 MXRA8Q9BRK3 442 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 THAP2Q9H0W7 228 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 SLC12A4Q9UP95 1085 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 ALG6Q9Y672 507 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 COL1A1P02452 1464 aaPredicted RBP11.17□□□□□ -0.62
RNF40-204ENST00000563683 BTNL10A8MVZ5 291 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 MEIS2O14770 477 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 RGL2O15211 777 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 KCNJ1P48048 391 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 KRT76Q01546 638 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 MIS18BP1Q6P0N0 1132 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 SCYL2Q6P3W7 929 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 CCDC137Q6PK04 289 aaKnown RBP11.17□□□□□ -0.62
RNF40-204ENST00000563683 TPCN2Q8NHX9 752 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 GRK7Q8WTQ7 553 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 RUNDC3BQ96NL0 473 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 CBWD1Q9BRT8 395 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 MSTO1Q9BUK6 570 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 RPAP3Q9H6T3 665 aaPredicted RBP11.17□□□□□ -0.62
RNF40-204ENST00000563683 ADAM22Q9P0K1 906 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 ANAPC5Q9UJX4 755 aa11.17□□□□□ -0.62
RNF40-204ENST00000563683 SYNGAP1Q96PV0 1343 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 MMEP08473 750 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 HSPA6P17066 643 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 CCND1P24385 295 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 ECHS1P30084 290 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 JAK3P52333 1124 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 HMGCS2P54868 508 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 GRM1Q13255 1194 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 ACCSLQ4AC99 568 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 TBC1D1Q86TI0 1168 aaPredicted RBP11.16□□□□□ -0.62
RNF40-204ENST00000563683 SLC17A8Q8NDX2 589 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 FBF1Q8TES7 1133 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 ELMO3Q96BJ8 720 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 IKZF4Q9H2S9 585 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.16□□□□□ -0.622e-7■□□□□ 10.8
RNF40-204ENST00000563683 FAM198AQ9UFP1 575 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 PCDHA10Q9Y5I2 948 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 ATP2A2P16615 1042 aaKnown RBP11.16□□□□□ -0.62
RNF40-204ENST00000563683 RPS6P62753 249 aaKnown RBP11.16□□□□□ -0.62
RNF40-204ENST00000563683 HHATQ5VTY9 493 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 TRPM8Q7Z2W7 1104 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 TMC3Q7Z5M5 1100 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 EGFL6Q8IUX8 553 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 THNSL1Q8IYQ7 743 aa11.16□□□□□ -0.62
RNF40-204ENST00000563683 GBP7Q8N8V2 638 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms